Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSH2

Gene Name Gene ID Reads Annotation
MSH2 ENSGALG00000008962 9709 mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]











Genes with expression patterns similar to MSH2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MSH2 ENSGALG00000008962 9709 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
2. FASN ENSGALG00000040896 17372 1.875 - - - - 0.884 - 0.991 - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
3. PWP1 ENSGALG00000012631 10536 1.789 - - - - 0.933 - - 0.856 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
4. ATP5J 14451 1.765 - - - - 0.940 - - 0.825 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
5. RNF11 ENSGALG00000010539 8617 1.744 - - - - - - 0.991 0.753 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
6. CTSL2 CTSL2 7966 1.733 - - - - 0.888 - - 0.845 - -
7. COPE ENSGALG00000003153 19444 1.725 - - - - 0.919 - - 0.806 - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
8. TMEM258 ENSGALG00000038292 31116 1.724 - - - - - - 0.993 0.731 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
9. CEP19 ENSGALG00000006405 1645 1.709 - - - - - - 0.990 0.719 - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
10. KIAA1524 ENSGALG00000015360 3527 1.68 - - - - 0.943 - - 0.737 - - KIAA1524 [Source:NCBI gene;Acc:418410]
11. SLC25A24 ENSGALG00000001938 3671 1.679 - - - - 0.919 - - 0.760 - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
12. ENSGALG00000004283 ENSGALG00000004283 4771 1.675 - - - - 0.920 - - 0.755 - -
13. THOC1 ENSGALG00000014915 5846 1.671 - - - - 0.904 - - 0.767 - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
14. DHX33 ENSGALG00000001630 7783 1.658 - - - - 0.938 - - 0.720 - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
15. TRAPPC6B ENSGALG00000010157 7567 1.646 - - - - 0.899 - - 0.747 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
16. MYBBP1A ENSGALG00000001363 10331 1.641 - - - - 0.939 0.702 - - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
17. ENSGALG00000026802 ENSGALG00000026802 14688 1.608 - - - - - - 0.760 0.848 - -
18. TSPAN3 ENSGALG00000002774 28811 1.524 - - - - 0.801 - 0.723 - - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
19. TIMM8A ENSGALG00000004963 14263 1.481 - - - - - 0.727 - 0.754 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
20. CFL2 ENSGALG00000010027 16952 0.994 - - - - - - 0.994 - - - cofilin 2 [Source:NCBI gene;Acc:423320]
21. SESTD1 ENSGALG00000009031 13090 0.993 - - - - - - 0.993 - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
22. RALGAPA1 ENSGALG00000010088 6005 0.992 - - - - - - 0.992 - - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
23. INPP5K ENSGALG00000002739 8120 0.992 - - - - - - 0.992 - - - inositol polyphosphate-5-phosphatase K [Source:NCBI gene;Acc:771549]
24. UFSP2 ENSGALG00000010601 5809 0.992 - - - - - - 0.992 - - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
25. XRCC3 ENSGALG00000011533 3768 0.992 - - - - - - 0.992 - - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
26. RANBP3 ENSGALG00000000577 8856 0.992 - - - - - - 0.992 - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
27. BCKDHB ENSGALG00000040702 9373 0.992 - - - - - - 0.992 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
28. CTNNA1 ENSGALG00000002447 22379 0.992 - - - - - - 0.992 - - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
29. HEY1 ENSGALG00000035031 8795 0.991 - - - - - - 0.991 - - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
30. ZNF385D ENSGALG00000011283 2578 0.991 - - - - - - 0.991 - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
31. TPX2 ENSGALG00000006267 26087 0.991 - - - - - - 0.991 - - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
32. NUS1 ENSGALG00000014899 13352 0.991 - - - - - - 0.991 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:21042]
33. DNAH17 1389 0.991 - - - - - - 0.991 - - - dynein axonemal heavy chain 17, transcript variant X6
34. SSB ENSGALG00000009677 25335 0.991 - - - - - - 0.991 - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
35. USMG5 ENSGALG00000034645 33263 0.99 - - - - - - 0.990 - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
36. GCC1 ENSGALG00000033149 1915 0.99 - - - - - - 0.990 - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
37. MAST4 ENSGALG00000014784 4153 0.99 - - - - - - 0.990 - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
38. DGCR14 DGCR14 2633 0.99 - - - - - - 0.990 - - -
39. ENSGALG00000023608 ENSGALG00000023608 1538 0.99 - - - - - - 0.990 - - -
40. RWDD2B ENSGALG00000015807 3601 0.99 - - - - - - 0.990 - - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
41. ACAT1 ENSGALG00000017163 6239 0.99 - - - - - - 0.990 - - - acetyl-CoA acetyltransferase 1 [Source:NCBI gene;Acc:418968]
42. AP3B2 2331 0.989 - - - - - - 0.989 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X7
43. COL4A5 ENSGALG00000008141 15874 0.989 - - - - - - 0.989 - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
44. ENSGALG00000023447 ENSGALG00000023447 17486 0.988 - - - - - - 0.988 - - -
45. UFM1 ENSGALG00000017042 15794 0.987 - - - - - - 0.987 - - - ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
46. RNF4 ENSGALG00000015668 15780 0.987 - - - - - - 0.987 - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
47. PSMD7 ENSGALG00000000707 26350 0.987 - - - - - - 0.987 - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
48. SRPR SRPR 21067 0.984 - - - - - - 0.984 - - -
49. CKS1B ENSGALG00000028664 42261 0.983 - - - - - - 0.983 - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
50. MRPS21 ENSGALG00000000456 35298 0.982 - - - - - - 0.982 - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
51. H3-IX_1 H3-IX_1 54392 0.971 - - - - - - 0.971 - - -
52. MAPRE1 ENSGALG00000006657 64346 0.968 - - - - - - 0.968 - - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
53. GTF2B ENSGALG00000006205 6950 0.948 - - - - 0.948 - - - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
54. APPBP2 ENSGALG00000005314 6447 0.946 - - - - 0.946 - - - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
55. RNF207 2949 0.944 - - - - 0.944 - - - - - ring finger protein 207, transcript variant X1
56. TMEM184C ENSGALG00000010019 7856 0.943 - - - - 0.943 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
57. PDHB ENSGALG00000029576 12254 0.942 - - - - 0.942 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
58. NDUFA4 ENSGALG00000025999 53323 0.942 - - - - 0.942 - - - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
59. RPAP3 ENSGALG00000009743 3380 0.941 - - - - 0.941 - - - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
60. C19orf70 ENSGALG00000026847 19315 0.94 - - - - 0.940 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
61. HNRNPA2B1 ENSGALG00000011036 53662 0.94 - - - - - - 0.940 - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
62. RASA2 ENSGALG00000002850 2231 0.939 - - - - 0.939 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
63. ATAD5 ENSGALG00000003294 4830 0.939 - - - - 0.939 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
64. MKKS ENSGALG00000009013 9301 0.939 - - - - 0.939 - - - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
65. DAP3 ENSGALG00000019796 13278 0.939 - - - - 0.939 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
66. ITPA ENSGALG00000003250 7722 0.939 - - - - 0.939 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
67. MPRIP ENSGALG00000004798 6700 0.938 - - - - 0.938 - - - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
68. TMEM203 ENSGALG00000008925 3033 0.937 - - - - 0.937 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
69. SLC25A15 ENSGALG00000017032 6773 0.937 - - - - 0.937 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
70. ZWILCH ENSGALG00000007736 4939 0.936 - - - - 0.936 - - - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
71. H2AFY_1 ENSGALG00000040141 4895 0.936 - - - - 0.936 - - - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
72. DNAJA1 ENSGALG00000023066 3820 0.936 - - - - 0.936 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
73. TXNDC11 ENSGALG00000003154 2224 0.936 - - - - 0.936 - - - - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
74. ALDH4A1 ENSGALG00000042184 9432 0.936 - - - - 0.936 - - - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
75. FZD6 ENSGALG00000030626 3336 0.936 - - - - 0.936 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
76. CHD4 ENSGALG00000013565 25695 0.936 - - - - 0.936 - - - - - chromodomain helicase DNA binding protein 4
77. DLGAP5 ENSGALG00000012165 2406 0.936 - - - - 0.936 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
78. SMC6 ENSGALG00000016467 3321 0.935 - - - - 0.935 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
79. THUMPD3 ENSGALG00000008394 17711 0.935 - - - - 0.935 - - - - - THUMP domain containing 3, transcript variant X2
80. TMX4 ENSGALG00000028587 3513 0.935 - - - - 0.935 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
81. COG6 ENSGALG00000017035 2777 0.935 - - - - 0.935 - - - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
82. ROCK1 ENSGALG00000014922 4020 0.935 - - - - 0.935 - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
83. TMEM97 ENSGALG00000005702 2037 0.934 - - - - 0.934 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
84. COQ3 ENSGALG00000015486 3508 0.934 - - - - 0.934 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
85. ERICH1 ENSGALG00000031021 1495 0.934 - - - - 0.934 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
86. PRKCD ENSGALG00000002016 1476 0.934 - - - - 0.934 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
87. TTC37 ENSGALG00000014670 5715 0.934 - - - - 0.934 - - - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
88. MAPKAPK2 ENSGALG00000000883 6174 0.934 - - - - 0.934 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
89. TAF13 ENSGALG00000015185 11410 0.933 - - - - 0.933 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
90. NQO2 ENSGALG00000025747 2287 0.933 - - - - 0.933 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
91. ZZZ3 ENSGALG00000008988 3132 0.933 - - - - 0.933 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
92. VCPKMT ENSGALG00000012269 2107 0.933 - - - - 0.933 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
93. RUVBL1 ENSGALG00000005931 9379 0.933 - - - - 0.933 - - - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
94. AP1S3 ENSGALG00000005171 2981 0.932 - - - - 0.932 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
95. KLF3 ENSGALG00000041717 2787 0.932 - - - - 0.932 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
96. FANCM ENSGALG00000031182 1030 0.932 - - - - 0.932 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
97. OGFOD3 ENSGALG00000001618 2438 0.932 - - - - 0.932 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
98. DAP ENSGALG00000013002 6815 0.932 - - - - 0.932 - - - - - death associated protein [Source:NCBI gene;Acc:420923]
99. ZBTB8OS ENSGALG00000003517 2436 0.932 - - - - 0.932 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
100. CRCP ENSGALG00000002587 8809 0.932 - - - - 0.932 - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]

There are 467 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA