Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSC

Gene Name Gene ID Reads Annotation
MSC ENSGALG00000037777 1109 musculin [Source:HGNC Symbol;Acc:HGNC:7321]











Genes with expression patterns similar to MSC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MSC ENSGALG00000037777 1109 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 musculin [Source:HGNC Symbol;Acc:HGNC:7321]
2. OSR2 ENSGALG00000037695 2010 1.678 - - 0.702 - - - - 0.976 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
3. MSANTD1 ENSGALG00000015628 154 1 - - - - - - - 1.000 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
4. PIGG ENSGALG00000015349 314 1 - - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
5. LONRF2 ENSGALG00000016768 193 1 - - - - - - - 1.000 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
6. SLC38A11 ENSGALG00000011052 386 0.999 - - - - - - - 0.999 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
7. GOLGA1 ENSGALG00000001025 334 0.999 - - - - - - - 0.999 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
8. RGCC ENSGALG00000016954 1282 0.999 - - - - - - - 0.999 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
9. HES5 ENSGALG00000001141 6514 0.999 - - - - - - - 0.999 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
10. NPHP3 ENSGALG00000034586 1465 0.999 - - - - - - - 0.999 - - nephrocystin 3, transcript variant X1
11. AP1S2 ENSGALG00000016551 421 0.999 - - - - - - - 0.999 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
12. C3H6ORF154 C3H6ORF154 1078 0.999 - - - - - - - 0.999 - -
13. CTTN ENSGALG00000007700 709 0.999 - - - - - - - 0.999 - - cortactin [Source:NCBI gene;Acc:396455]
14. CCM2 ENSGALG00000005612 323 0.999 - - - - - - - 0.999 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
15. ACSBG2 ENSGALG00000001749 1681 0.999 - - - - - - - 0.999 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
16. SLC16A2 ENSGALG00000007748 446 0.999 - - - - - - - 0.999 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
17. APC ENSGALG00000000220 1266 0.999 - - - - - - - 0.999 - - APC, WNT signaling pathway regulator, transcript variant X12
18. MAN2A2 ENSGALG00000033790 2717 0.999 - - - - - - - 0.999 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
19. IRF2BPL ENSGALG00000041616 2835 0.998 - - - - - - - 0.998 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
20. ENSGALG00000012564 ENSGALG00000012564 426 0.997 - - - - - - - 0.997 - -
21. ITPR1 ENSGALG00000008294 1226 0.997 - - - - - - - 0.997 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
22. TBC1D32 ENSGALG00000014876 681 0.997 - - - - - - - 0.997 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
23. CA9 ENSGALG00000021340 1431 0.997 - - - - - - - 0.997 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
24. USP25 ENSGALG00000015693 2567 0.995 - - - - - - - 0.995 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
25. EIF2A ENSGALG00000010401 2201 0.995 - - - - - - - 0.995 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
26. OXSR1 ENSGALG00000005979 2905 0.995 - - - - - - - 0.995 - - oxidative stress responsive 1
27. USP54 ENSGALG00000005232 2749 0.994 - - - - - - - 0.994 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
28. RPP38 ENSGALG00000008794 1057 0.994 - - - - - - - 0.994 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
29. KIAA1191 ENSGALG00000003370 2599 0.994 - - - - - - - 0.994 - - KIAA1191 [Source:NCBI gene;Acc:416230]
30. RAB35 ENSGALG00000007308 6300 0.994 - - - - - - - 0.994 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
31. TMF1 ENSGALG00000013408 3344 0.994 - - - - - - - 0.994 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
32. RAB9A ENSGALG00000016579 3262 0.993 - - - - - - - 0.993 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
33. LPAR1 ENSGALG00000015729 3874 0.991 - - - - - - - 0.991 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
34. TATDN1 ENSGALG00000041072 1585 0.99 - - - - - - - 0.990 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
35. UTP20 ENSGALG00000011643 3012 0.989 - - - - - - - 0.989 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
36. ATG13 ENSGALG00000008347 7374 0.989 - - - - - - - 0.989 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
37. HSBP1 ENSGALG00000043039 2365 0.989 - - - - - - - 0.989 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
38. DFFA ENSGALG00000002820 2046 0.988 - - - - - - - 0.988 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
39. BFAR ENSGALG00000003111 1778 0.988 - - - - - - - 0.988 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
40. TMEM135 2283 0.988 - - - - - - - 0.988 - - transmembrane protein 135, transcript variant X4
41. HSD17B2 ENSGALG00000005467 275 0.987 - - - - - - - 0.987 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
42. JARID2 ENSGALG00000012702 4280 0.987 - - - - - - - 0.987 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
43. FBXO28 ENSGALG00000009331 2871 0.987 - - - - - - - 0.987 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
44. BET1 ENSGALG00000024485 2451 0.987 - - - - - - - 0.987 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
45. WDFY1 ENSGALG00000005158 2512 0.985 - - - - - - - 0.985 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
46. TMEM168 ENSGALG00000009443 2452 0.985 - - - - - - - 0.985 - - transmembrane protein 168, transcript variant X1
47. UBR2 ENSGALG00000009906 7717 0.982 - - - - - - - 0.982 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
48. KLF5 ENSGALG00000016927 1080 0.981 - - - - - - - 0.981 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
49. GCN1L1 GCN1L1 4601 0.979 - - - - - - - 0.979 - -
50. AFAP1L2 ENSGALG00000008999 1305 0.977 - - - - - - - 0.977 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
51. COPG2 ENSGALG00000008144 4542 0.975 - - - - - - - 0.975 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
52. MGAT4B ENSGALG00000005924 2663 0.975 - - - - - - - 0.975 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
53. SFRP2 ENSGALG00000009241 4716 0.975 - - - - - - - 0.975 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
54. CDC23 ENSGALG00000007610 11945 0.972 - - - - - - - 0.972 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
55. NFU1 ENSGALG00000030200 6882 0.97 - - - - - - - 0.970 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
56. CDC7 ENSGALG00000006051 3996 0.969 - - - - - - - 0.969 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
57. SIGMAR1 ENSGALG00000028996 12267 0.969 - - - - - - - 0.969 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
58. HECTD1 ENSGALG00000009946 1946 0.967 - - - - - - - 0.967 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
59. EMG1 ENSGALG00000014568 8102 0.965 - - - - - - - 0.965 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
60. PMPCB ENSGALG00000008280 6357 0.964 - - - - - - - 0.964 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
61. ACOT13 ENSGALG00000013632 5550 0.963 - - - - - - - 0.963 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
62. MYBBP1A ENSGALG00000001363 10331 0.962 - - - - - - - 0.962 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
63. AP3S1 ENSGALG00000002341 12388 0.958 - - - - - - - 0.958 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
64. CXorf56 ENSGALG00000008652 7848 0.958 - - - - - - - 0.958 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
65. WDR11 ENSGALG00000035013 3393 0.956 - - - - - - - 0.956 - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
66. TGS1 ENSGALG00000015340 5897 0.956 - - - - - - - 0.956 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
67. LYPD6B ENSGALG00000028759 831 0.956 - - - - - - - 0.956 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
68. LATS1 ENSGALG00000012386 3455 0.955 - - - - - - - 0.955 - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
69. CYP51A1 ENSGALG00000009365 6996 0.951 - - - - - - - 0.951 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
70. DDX47 ENSGALG00000011794 4255 0.95 - - - - - - - 0.950 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
71. UPK3BL ENSGALG00000001885 1650 0.945 - - - - - - - 0.945 - - uroplakin 3B-like
72. CEPT1 ENSGALG00000000142 4219 0.943 - - - - - - - 0.943 - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
73. WDR36 ENSGALG00000000247 11277 0.94 - - - - - - - 0.940 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
74. LMAN2 ENSGALG00000033232 11740 0.936 - - - - - - - 0.936 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
75. MRPS36 ENSGALG00000014789 7584 0.933 - - - - - - - 0.933 - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
76. MED30 ENSGALG00000030862 7163 0.929 - - - - - - - 0.929 - - mediator complex subunit 30 [Source:NCBI gene;Acc:420284]
77. DOCK7 6385 0.928 - - - - - - - 0.928 - - dedicator of cytokinesis 7, transcript variant X3
78. BPTF ENSGALG00000038222 7521 0.925 - - - - - - - 0.925 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
79. FAM49B ENSGALG00000036490 7984 0.919 - - - - - - - 0.919 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
80. RPA1 ENSGALG00000003072 8023 0.918 - - - - - - - 0.918 - - replication protein A1 [Source:NCBI gene;Acc:417563]
81. C6H10ORF32 C6H10ORF32 7694 0.917 - - - - - - - 0.917 - -
82. RPN2 ENSGALG00000003815 18864 0.913 - - - - - - - 0.913 - - ribophorin II [Source:NCBI gene;Acc:419177]
83. FBXO30 ENSGALG00000041684 3033 0.906 - - - - - - - 0.906 - - F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
84. FAM162A ENSGALG00000007378 8290 0.904 - - - - - - - 0.904 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
85. ENSGALG00000000514 ENSGALG00000000514 9906 0.882 - - - - - - - 0.882 - -
86. POGLUT1 ENSGALG00000015480 12290 0.88 - - - - - - - 0.880 - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
87. ACTL6A ENSGALG00000009061 13013 0.872 - - - - - - - 0.872 - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
88. OLFML3 ENSGALG00000001956 28633 0.871 - - - - - - - 0.871 - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
89. WHSC2 WHSC2 3673 0.855 - - - - - - - 0.855 - -
90. PROSC 6856 0.849 - - - - - - - 0.849 - - proline synthetase cotranscribed homolog (bacterial), transcript variant X1
91. CDC42SE1 ENSGALG00000028119 14813 0.848 - - - - - - - 0.848 - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
92. UBE3A ENSGALG00000034944 5196 0.845 - - - - - - - 0.845 - - ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
93. PFKP ENSGALG00000006939 10149 0.844 - - - - - - - 0.844 - - phosphofructokinase, platelet [Source:NCBI gene;Acc:428411]
94. TMPO ENSGALG00000011504 14454 0.843 - - - - - - - 0.843 - - thymopoietin [Source:NCBI gene;Acc:417923]
95. BLOC1S2 ENSGALG00000005794 544 0.839 - - - - - 0.839 - - - - biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
96. DAPK3 ENSGALG00000037733 6215 0.834 - - - - - - - 0.834 - - death-associated protein kinase 3, transcript variant X2
97. NDUFA8 ENSGALG00000040987 49453 0.829 - - - - - - - 0.829 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
98. LOC769139 ENSGALG00000026754 753 0.823 - - - - - - - 0.823 - - feather keratin 1-like, transcript variant X2
99. CRLS1 ENSGALG00000009214 8652 0.819 - - - - - - - 0.819 - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
100. WDR77 ENSGALG00000040864 3766 0.817 - - - - - - - 0.817 - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]

There are 110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA