Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MRVI1

Gene Name Gene ID Reads Annotation
MRVI1 ENSDARG00000074602 443 murine retrovirus integration site 1 homolog [Source:ZFIN;Acc:ZDB-GENE-120221-4]










Genes with expression patterns similar to MRVI1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MRVI1 ENSDARG00000074602 443 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 murine retrovirus integration site 1 homolog [Source:ZFIN;Acc:ZDB-GENE-120221-4]
2. FAM72B ENSDARG00000070621 501 2.35 - 0.731 - - - - 0.722 0.897 - family with sequence similarity 72 member B [Source:HGNC Symbol;Acc:HGNC:24805]
3. neurla neurla 465 1.655 - - - - - - 0.757 0.898 -
4. si:ch211-10d23.5 ENSDARG00000095510 2632 1.626 - - - - - 0.789 - 0.837 - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
5. LPHN3 LPHN3 195 1.619 - - - - - - 0.701 0.918 -
6. asns ENSDARG00000016375 1606 1.616 - - - - - 0.707 - 0.909 - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
7. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.609 - 0.701 - - - - - 0.908 - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
8. ppp2r4 1005 1.6 - - - - - - 0.714 0.886 - protein phosphatase 2A activator, regulatory subunit 4
9. ppp1r15a ENSDARG00000069135 871 1.584 - - - - - - 0.786 0.798 - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
10. bmi1b ENSDARG00000013076 1020 1.561 - 0.717 - - - - - 0.844 - bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
11. cilp ENSDARG00000053362 1429 1.548 - 0.704 - - - - - 0.844 - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
12. snx5 ENSDARG00000020442 2463 1.545 - 0.777 - - - - - 0.768 - sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
13. dmtn ENSDARG00000013110 791 1.531 - 0.806 - - - - 0.725 - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
14. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.53 - - - - - 0.740 - 0.790 - StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
15. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 1.5 - 0.742 - - - 0.758 - - - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
16. gipc1 ENSDARG00000104483 2913 1.487 - 0.726 - - - - 0.761 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
17. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.442 - 0.717 - - - - - 0.725 - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
18. ampd3a ENSDARG00000005800 498 1.439 - 0.706 - - - - - 0.733 - adenosine monophosphate deaminase 3a [Source:ZFIN;Acc:ZDB-GENE-110407-2]
19. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 0.968 - - - - - - - 0.968 - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
20. igdcc4 ENSDARG00000076919 1303 0.965 - - - - - - - 0.965 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
21. pet112 pet112 223 0.963 - - - - - - - 0.963 -
22. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 0.963 - - - - - - - 0.963 - ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
23. hmgcs1 ENSDARG00000103025 231 0.959 - - - - - - - 0.959 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]
24. zcchc9 ENSDARG00000007531 1748 0.958 - - - - - - - 0.958 - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
25. mknk1 ENSDARG00000018411 749 0.954 - - - - - - - 0.954 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
26. styx ENSDARG00000057699 48 0.951 - - - - - - - 0.951 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
27. CR936337.1 CR936337.1 38 0.951 - - - - - - - 0.951 -
28. BX682234.2 BX682234.2 28 0.951 - - - - - - - 0.951 -
29. FCHSD2 FCHSD2 35 0.951 - - - - - - - 0.951 -
30. CABZ01039859.1 ENSDARG00000076361 540 0.951 - - - - - - - 0.951 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
31. si:ch73-67c22.3 si:ch73-67c22.3 30 0.951 - - - - - - - 0.951 -
32. MYLK4 MYLK4 180 0.951 - - - - - - - 0.951 -
33. CR848836.5 CR848836.5 42 0.951 - - - - - - - 0.951 -
34. si:ch211-67e16.2 41 0.951 - - - - - - - 0.951 - si:ch211-67e16.2, transcript variant X2
35. MEGF9 MEGF9 482 0.951 - - - - - - - 0.951 -
36. chrna2b ENSDARG00000057025 217 0.951 - - - - - - - 0.951 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
37. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.951 - - - - - - - 0.951 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
38. JAKMIP3 ENSDARG00000100708 56 0.951 - - - - - - - 0.951 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
39. CABZ01114089.1 CABZ01114089.1 127 0.95 - - - - - - - 0.950 -
40. htra3a ENSDARG00000052895 28 0.95 - - - - - - - 0.950 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
41. pggt1b ENSDARG00000103464 441 0.95 - - - - - - - 0.950 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
42. si:dkey-29n10.3 si:dkey-29n10.3 66 0.95 - - - - - - - 0.950 -
43. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.95 - - - - - - - 0.950 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
44. si:ch211-254c8.2 233 0.95 - - - - - - - 0.950 - si:ch211-254c8.2, transcript variant X4
45. si:dkey-10g2.5 si:dkey-10g2.5 72 0.95 - - - - - - - 0.950 -
46. dnah9l ENSDARG00000062630 268 0.95 - - - - - - - 0.950 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
47. CABZ01087562.1 CABZ01087562.1 80 0.95 - - - - - - - 0.950 -
48. sv2ba ENSDARG00000057427 33 0.95 - - - - - - - 0.950 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
49. si:ch211-106h4.9 ENSDARG00000075706 36 0.949 - - - - - - - 0.949 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
50. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.949 - - - - - - - 0.949 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
51. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.949 - - - - - - - 0.949 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
52. gcdhl gcdhl 38 0.949 - - - - - - - 0.949 -
53. cx28.8 ENSDARG00000071042 62 0.948 - - - - - - - 0.948 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
54. CU234171.2 CU234171.2 86 0.947 - - - - - - - 0.947 -
55. mlh1 ENSDARG00000025948 130 0.946 - - - - - - - 0.946 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
56. fbxo7 ENSDARG00000099833 304 0.945 - - - - - - - 0.945 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
57. slc2a8 ENSDARG00000104278 764 0.945 - - - - - - - 0.945 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
58. trabd ENSDARG00000010445 195 0.945 - - - - - - - 0.945 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
59. rad23aa ENSDARG00000020001 374 0.944 - - - - - - - 0.944 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
60. si:dkey-11f4.16 ENSDARG00000099799 121 0.944 - - - - - - - 0.944 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
61. aars2 ENSDARG00000107385 190 0.944 - - - - - - - 0.944 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
62. si:dkey-266m15.6 ENSDARG00000078508 490 0.943 - - - - - - - 0.943 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
63. STIM2 STIM2 644 0.943 - - - - - - - 0.943 -
64. fam63b 484 0.943 - - - - - - - 0.943 - family with sequence similarity 63, member B
65. cacnb2a ENSDARG00000099045 374 0.943 - - - - - - - 0.943 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
66. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.942 - - - - - - - 0.942 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
67. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 0.941 - - - - - - - 0.941 - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
68. rab20 ENSDARG00000005049 346 0.94 - - - - - - - 0.940 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
69. si:dkey-23c22.4 si:dkey-23c22.4 556 0.94 - - - - - - - 0.940 -
70. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.939 - - - - - - - 0.939 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
71. phf19 ENSDARG00000078050 117 0.939 - - - - - - - 0.939 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
72. snx8a ENSDARG00000074842 411 0.939 - - - - - - - 0.939 - sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
73. elp3 ENSDARG00000042005 936 0.939 - - - - - - - 0.939 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
74. hey2 ENSDARG00000013441 540 0.938 - - - - - - - 0.938 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
75. rbm27 ENSDARG00000060521 185 0.937 - - - - - - - 0.937 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
76. phf16 phf16 1116 0.937 - - - - - - - 0.937 -
77. SNAPC2 ENSDARG00000036473 158 0.937 - - - - - - - 0.937 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
78. SH2B2 ENSDARG00000090421 245 0.936 - - - - - - - 0.936 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
79. rint1 ENSDARG00000005547 898 0.935 - - - - - - - 0.935 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
80. trpm1b ENSDARG00000103476 369 0.935 - - - - - - - 0.935 - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
81. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 0.935 - - - - - - - 0.935 - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
82. si:dkey-57k17.1 ENSDARG00000104697 442 0.934 - - - - - - - 0.934 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
83. zgc:101640 733 0.934 - - - - - - - 0.934 - zgc:101640, transcript variant X2
84. mgat2 ENSDARG00000052408 264 0.932 - - - - - - - 0.932 - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
85. CACHD1 ENSDARG00000061590 1287 0.932 - - - - - - - 0.932 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
86. CABZ01086825.1 CABZ01086825.1 573 0.932 - - - - - - - 0.932 -
87. OLFM4_1 OLFM4_1 213 0.932 - - - - - - - 0.932 -
88. zgc:66474 ENSDARG00000026453 784 0.931 - - - - - - - 0.931 - zgc:66474 [Source:ZFIN;Acc:ZDB-GENE-030131-5711]
89. fhl1b ENSDARG00000056653 577 0.931 - - - - - - - 0.931 - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
90. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 0.931 - - - - - - - 0.931 - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
91. clip2 ENSDARG00000059596 529 0.931 - - - - - - - 0.931 - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
92. si:ch211-269i23.2 432 0.93 - - - - - - - 0.930 - si:ch211-269i23.2, transcript variant X3
93. CU693494.3 CU693494.3 169 0.929 - - - - - - - 0.929 -
94. stmn4 ENSDARG00000030106 518 0.928 - - - - - - - 0.928 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
95. rassf6 ENSDARG00000000804 1090 0.927 - - - - - - - 0.927 - Ras association (RalGDS/AF-6) domain family 6 [Source:ZFIN;Acc:ZDB-GENE-030616-513]
96. clasp1a ENSDARG00000010280 1158 0.926 - - - - - - - 0.926 - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
97. tmem223 ENSDARG00000069494 1528 0.926 - - - - - - - 0.926 - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
98. noc4l ENSDARG00000045565 1337 0.923 - - - - - - - 0.923 - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
99. eng1a eng1a 484 0.923 - - - - - - - 0.923 -
100. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.923 - - - - - - - 0.923 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]

There are 597 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA