Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MRPS28

Gene Name Gene ID Reads Annotation
MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]










Genes with expression patterns similar to MRPS28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
2. loxl2a ENSDARG00000044010 1906 1.796 - 0.796 - - - - 1.000 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
3. aup1 ENSDARG00000092609 2431 1.599 - 0.814 - - - 0.785 - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
4. nans nans 1365 1.434 - 0.729 - 0.705 - - - - -
5. cth ENSDARG00000074301 3860 1 - - - - - - 1.000 - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
6. aspg ENSDARG00000052942 1406 1 - - - - - - 1.000 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
7. rbm39a ENSDARG00000011613 4520 1 - - - - - - 1.000 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
8. AL772300.3 AL772300.3 1752 1 - - - - - - 1.000 - -
9. serpine2 ENSDARG00000029353 2274 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
10. stx12 ENSDARG00000098813 2576 1 - - - - - - 1.000 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
11. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 1 - - - - - - 1.000 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
12. parp1 ENSDARG00000019529 6787 1 - - - - - - 1.000 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
13. wu:fj08f03 wu:fj08f03 1337 1 - - - - - - 1.000 - -
14. rgma ENSDARG00000012248 2238 1 - - - - - - 1.000 - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
15. CT955967.1 ENSDARG00000099956 2885 1 - - - - - - 1.000 - -
16. TUBGCP6 1991 1 - - - - - - 1.000 - - tubulin, gamma complex associated protein 6
17. phf2 ENSDARG00000018691 3341 1 - - - - - - 1.000 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
18. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 1 - - - - - - 1.000 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
19. chd2 ENSDARG00000060687 3832 1 - - - - - - 1.000 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
20. EIF4G1_1 EIF4G1_1 3721 1 - - - - - - 1.000 - -
21. cep97 ENSDARG00000102407 1154 1 - - - - - - 1.000 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
22. efcab7 ENSDARG00000020279 1030 1 - - - - - - 1.000 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
23. PCDH9 ENSDARG00000063264 1309 1 - - - - - - 1.000 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
24. slc16a12b ENSDARG00000089885 3744 0.999 - - - - - - 0.999 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
25. sh3gl3a ENSDARG00000013360 3602 0.999 - - - - - - 0.999 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
26. cmip ENSDARG00000062933 4521 0.999 - - - - - - 0.999 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
27. BX548078.1 ENSDARG00000093780 1325 0.999 - - - - - - 0.999 - -
28. vamp3 ENSDARG00000070161 6396 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
29. hoxb8a ENSDARG00000056027 6340 0.999 - - - - - - 0.999 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
30. loxl1 ENSDARG00000054451 2485 0.999 - - - - - - 0.999 - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
31. ndufa7 ENSDARG00000036684 6051 0.999 - - - - - - 0.999 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
32. bin2a ENSDARG00000003219 1369 0.999 - - - - - - 0.999 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
33. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.999 - - - - - - 0.999 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
34. FP102272.1 FP102272.1 9473 0.999 - - - - - - 0.999 - -
35. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.998 - - - - - - 0.998 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
36. rab5aa ENSDARG00000018602 8947 0.998 - - - - - - 0.998 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
37. psmd6 ENSDARG00000070674 4675 0.998 - - - - - - 0.998 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
38. zgc:101000 zgc:101000 9041 0.998 - - - - - - 0.998 - -
39. rab1ba ENSDARG00000058044 5080 0.998 - - - - - - 0.998 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
40. cx43.4 ENSDARG00000007099 16369 0.997 - - - - - - 0.997 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
41. eif3c ENSDARG00000016443 18003 0.997 - - - - - - 0.997 - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
42. CU463857.1 CU463857.1 5541 0.997 - - - - - - 0.997 - -
43. lamc1 ENSDARG00000036279 11025 0.996 - - - - - - 0.996 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
44. rnaseka ENSDARG00000069461 10304 0.996 - - - - - - 0.996 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
45. lgals3l lgals3l 3833 0.996 - - - - - - 0.996 - -
46. rbx1 ENSDARG00000038030 14611 0.994 - - - - - - 0.994 - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
47. nr2f1a ENSDARG00000052695 5037 0.994 - - - - - - 0.994 - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
48. hmgcl ENSDARG00000021220 2468 0.994 - - - - - - 0.994 - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
49. mat2aa ENSDARG00000040334 10769 0.994 - - - - - - 0.994 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
50. qkia ENSDARG00000097478 18572 0.993 - - - - - - 0.993 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
51. snd1 ENSDARG00000006766 12906 0.992 - - - - - - 0.992 - - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
52. tomm20b ENSDARG00000103566 12436 0.991 - - - - - - 0.991 - - translocase of outer mitochondrial membrane 20b [Source:ZFIN;Acc:ZDB-GENE-040718-451]
53. oaz1a ENSDARG00000071403 21112 0.991 - - - - - - 0.991 - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
54. srsf5a ENSDARG00000029818 15600 0.99 - - - - - - 0.990 - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
55. IDH2 ENSDARG00000003795 18659 0.989 - - - - - - 0.989 - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
56. ENSDARG00000070355 ENSDARG00000070355 8316 0.986 - - - - - - 0.986 - -
57. suclg1 ENSDARG00000052712 17570 0.985 - - - - - - 0.985 - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
58. tubb4b ENSDARG00000002344 30333 0.983 - - - - - - 0.983 - - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
59. wnk1b ENSDARG00000039392 3587 0.978 - - - - - - 0.978 - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
60. ywhaba ENSDARG00000013078 42000 0.976 - - - - - - 0.976 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
61. ldha ENSDARG00000101251 10868 0.971 - - - - - - 0.971 - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
62. khdrbs1a ENSDARG00000052856 53666 0.963 - - - - - - 0.963 - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
63. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 0.963 - - - - - - 0.963 - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
64. nqo1 ENSDARG00000010250 6430 0.955 - - - - - - 0.955 - - NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]
65. fabp1b.1 ENSDARG00000059227 5670 0.944 - - - - - - 0.944 - - fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
66. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 0.936 - - - - - - 0.936 - - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
67. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 0.923 - - - - - - 0.923 - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
68. si:dkey-150i13.2 ENSDARG00000071052 79030 0.905 - - - - - - 0.905 - - si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
69. ccng1 ENSDARG00000076667, ENSDARG00000110260 40792 0.896 - - - - - - 0.896 - - cyclin G1 [Source:ZFIN;Acc:ZDB-GENE-020322-1]
70. rps24 ENSDARG00000039347 70399 0.882 - - - - - - 0.882 - - ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
71. ROMO1 ENSDARG00000038076 7999 0.877 - - - - - - 0.877 - - reactive oxygen species modulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1768]
72. tead3a ENSDARG00000074321 2240 0.877 - 0.877 - - - - - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
73. fkbp9 ENSDARG00000005023 17518 0.874 - - - - - - 0.874 - - FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
74. gid8b ENSDARG00000037589 2121 0.865 - 0.865 - - - - - - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
75. zswim5 ENSDARG00000055900 4243 0.856 - 0.856 - - - - - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
76. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 0.854 - - - - - - 0.854 - - solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
77. aclya ENSDARG00000099079 2324 0.851 - 0.851 - - - - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
78. si:ch211-71n6.4 ENSDARG00000102234 2499 0.847 - 0.847 - - - - - - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
79. rps10 ENSDARG00000034897 71395 0.843 - - - - - - 0.843 - - ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
80. ldb3b ENSDARG00000099974 33615 0.841 - - - - - - 0.841 - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
81. TDG TDG 1191 0.837 - - - 0.837 - - - - -
82. hmgcrb ENSDARG00000105206 2080 0.832 - 0.832 - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
83. adssl ENSDARG00000012399 2271 0.826 - 0.826 - - - - - - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
84. coro1ca ENSDARG00000035598 9278 0.824 - 0.824 - - - - - - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
85. ccnd2a ENSDARG00000051748 2506 0.822 - 0.822 - - - - - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
86. ppdpfa ENSDARG00000007682 3214 0.822 - 0.822 - - - - - - - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
87. CECR2 ENSDARG00000078310 903 0.82 - 0.820 - - - - - - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
88. MFAP3L ENSDARG00000062752, ENSDARG00000115337 1373 0.82 - 0.820 - - - - - - - microfibril associated protein 3 like [Source:ZFIN;Acc:ZDB-GENE-111229-2]
89. ncl1 2835 0.817 - - - - - 0.817 - - - nicalin, transcript variant X3
90. PTGFRN_1 ENSDARG00000075505 1447 0.815 - - - 0.815 - - - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
91. kdm4b ENSDARG00000099675 2037 0.815 - 0.815 - - - - - - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
92. higd2a ENSDARG00000052371 7354 0.812 - 0.812 - - - - - - - HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
93. phactr3b ENSDARG00000019304 447 0.812 - 0.812 - - - - - - - phosphatase and actin regulator 3b [Source:ZFIN;Acc:ZDB-GENE-050522-156]
94. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 0.811 - 0.811 - - - - - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
95. fkbp7 ENSDARG00000010962 2986 0.81 - 0.810 - - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
96. adrbk2 1037 0.807 - - - - - 0.807 - - - adrenergic, beta, receptor kinase 2, transcript variant X1
97. SLC22A16 ENSDARG00000015869 1086 0.807 - 0.807 - - - - - - - solute carrier family 22 (organic cation/carnitine transporter), member 16 [Source:ZFIN;Acc:ZDB-GENE-041001-166]
98. mrps21 ENSDARG00000070985 3943 0.806 - - - - - 0.806 - - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]
99. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 0.806 - 0.806 - - - - - - - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
100. COA6 ENSDARG00000092677 1877 0.806 - 0.806 - - - - - - - cytochrome c oxidase assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-070705-152]

There are 359 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA