Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPS17

Gene Name Gene ID Reads Annotation
MRPS17 ENSGALG00000002379 30243 mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]











Genes with expression patterns similar to MRPS17

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPS17 ENSGALG00000002379 30243 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
2. CASP3 ENSGALG00000010638 11572 1.835 - - - - - - 0.857 0.978 - - caspase 3 [Source:NCBI gene;Acc:395476]
3. CHMP5 ENSGALG00000013160 13347 1.775 - - - - - - 0.797 0.978 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
4. UTP11L UTP11L 11927 1.727 - - - - - - 0.846 0.881 - -
5. NOC4L ENSGALG00000002272 9644 1.719 - - - - - - 0.769 0.950 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
6. CENPP ENSGALG00000004687 6707 1.718 - - - - - - 0.792 0.926 - - centromere protein P [Source:NCBI gene;Acc:415952]
7. COL4A6 ENSGALG00000008266 6374 1.617 - - - - - - 0.711 0.906 - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
8. RPS3A ENSGALG00000010077 292185 1.569 - - - - - - 0.821 - - 0.748 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
9. CCDC59 ENSGALG00000028648 9272 1.553 - - - - - - 0.715 0.838 - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
10. PIK3IP1 ENSGALG00000006942 8388 1.545 - - - - - - 0.723 0.822 - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
11. RBP5 ENSGALG00000014662 31268 1.519 - - - - - 0.750 0.769 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
12. AN1ZNF5L ENSGALG00000014589 21148 1.511 - - - - - - 0.797 0.714 - - AN1-type zinc finger protein 5-like, transcript variant X2
13. DNAJA4 ENSGALG00000036850 6847 1.49 - - - - - - 0.769 - - 0.721 DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
14. ARHGAP11A ENSGALG00000009731 6817 0.986 - - - - - - - 0.986 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
15. EIF3D ENSGALG00000012529 40887 0.981 - - - - - - - 0.981 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
16. CHTOP ENSGALG00000042129 24112 0.979 - - - - - - - 0.979 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
17. RIC8A ENSGALG00000004191 6094 0.978 - - - - - - - 0.978 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
18. TMTC2 ENSGALG00000010975 7040 0.977 - - - - - - - 0.977 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
19. ATL1 ENSGALG00000012339 3789 0.976 - - - - - - - 0.976 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
20. PDCD2L 4843 0.976 - - - - - - - 0.976 - - programmed cell death 2-like
21. JKAMP ENSGALG00000012009 5781 0.976 - - - - - - - 0.976 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
22. UBALD1 ENSGALG00000007619 8536 0.975 - - - - - - - 0.975 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
23. HBXIP HBXIP 8637 0.974 - - - - - - - 0.974 - -
24. FAM125B FAM125B 2953 0.974 - - - - - - - 0.974 - -
25. RNF113A ENSGALG00000000538 3985 0.974 - - - - - - - 0.974 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
26. PGM1 ENSGALG00000011016 3391 0.974 - - - - - - - 0.974 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
27. NPFF1 NPFF1 3177 0.974 - - - - - - - 0.974 - -
28. ENSGALG00000010034 ENSGALG00000010034 3293 0.974 - - - - - - - 0.974 - -
29. YTHDC2 2266 0.973 - - - - - - - 0.973 - - YTH domain containing 2, transcript variant X3
30. RRN3 ENSGALG00000041989 3934 0.973 - - - - - - - 0.973 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
31. GGA3 ENSGALG00000007992 3566 0.973 - - - - - - - 0.973 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
32. CARKD CARKD 2914 0.973 - - - - - - - 0.973 - -
33. RBFA ENSGALG00000036067 6542 0.972 - - - - - - - 0.972 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
34. MADD ENSGALG00000008181 2273 0.972 - - - - - - - 0.972 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
35. SCLT1 2397 0.972 - - - - - - - 0.972 - - sodium channel and clathrin linker 1, transcript variant X6
36. FXN ENSGALG00000015108 1867 0.971 - - - - - - - 0.971 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
37. DDX24 ENSGALG00000010884 5485 0.971 - - - - - - - 0.971 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
38. KIAA0895L 1739 0.97 - - - - - - - 0.970 - - KIAA0895 like, transcript variant X4
39. NDUFA2 ENSGALG00000040626 27899 0.968 - - - - - - - 0.968 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
40. MMADHC ENSGALG00000012473 9026 0.962 - - - - - - - 0.962 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
41. NECAP1 ENSGALG00000037656 5181 0.96 - - - - - - - 0.960 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
42. SMC3 ENSGALG00000008585 16618 0.949 - - - - - - - 0.949 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
43. PRKG1 ENSGALG00000003805 4654 0.942 - - - - - - - 0.942 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
44. SQLE ENSGALG00000036915 4172 0.935 - - - - - - - 0.935 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
45. BSDC1 ENSGALG00000003405 3701 0.927 - - - - - - - 0.927 - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
46. ALYREF ENSGALG00000007237 48479 0.924 - - - - - - - 0.924 - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
47. GCLM ENSGALG00000005782 15789 0.924 - - - - - - - 0.924 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
48. SEC11A ENSGALG00000037553 32123 0.898 - - - - - - - 0.898 - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
49. MCTS1 ENSGALG00000008517 27514 0.894 - - - - - - 0.894 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
50. EIF2B EIF2B 28702 0.89 - - - - - - 0.890 - - -
51. GLRX3 ENSGALG00000010464 22578 0.877 - - - - - - 0.877 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
52. MAPRE1 ENSGALG00000006657 64346 0.876 - - - - - - - 0.876 - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
53. MRPL54 ENSGALG00000027611 39450 0.872 - - - - - - 0.872 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
54. NXN 20202 0.867 - - - - - - 0.867 - - - nucleoredoxin, transcript variant X1
55. GNL3 ENSGALG00000001613 10911 0.864 - - - - - - 0.864 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
56. SMU1 ENSGALG00000002014 8136 0.864 - - - - - - 0.864 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
57. PITX2 ENSGALG00000042492 20419 0.86 - - - - - - - 0.860 - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
58. HMGN2 HMGN2 158543 0.858 - - - - - - - 0.858 - -
59. PSMD12 ENSGALG00000026225 17473 0.858 - - - - - - 0.858 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
60. RBBP4 ENSGALG00000003522 72455 0.848 - - - - - - 0.848 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
61. AES ENSGALG00000029503 17676 0.846 - - - - - - 0.846 - - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
62. EIF3E ENSGALG00000037067 36561 0.838 - - - - - - - 0.838 - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
63. GSPT1 15580 0.837 - - - - - - 0.837 - - - G1 to S phase transition 1, transcript variant X1
64. PSMB7 ENSGALG00000001103 42683 0.836 - - - - - - 0.836 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
65. LMAN1 ENSGALG00000034821 12788 0.835 - - - - - - 0.835 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
66. SSR3 ENSGALG00000028683 24334 0.833 - - - - - - 0.833 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
67. UBE2F ENSGALG00000003812 13874 0.83 - - - - - - 0.830 - - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
68. NENF ENSGALG00000009821 4826 0.829 - - - - - - 0.829 - - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
69. SRRM1 ENSGALG00000001283 23820 0.829 - - - - - - 0.829 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
70. GLRX5 ENSGALG00000011079 28943 0.829 - - - - - - 0.829 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
71. MOSPD1 ENSGALG00000006132 8503 0.829 - - - - - - 0.829 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
72. UQCRC1 ENSGALG00000005789 23201 0.828 - - - - - - 0.828 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
73. NDUFA4 ENSGALG00000025999 53323 0.828 - - - - - - - 0.828 - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
74. SELT SELT 25524 0.828 - - - - - - - 0.828 - -
75. PRPS1 ENSGALG00000004908 27994 0.827 - - - - - - - 0.827 - - phosphoribosyl pyrophosphate synthetase 1
76. ID1 ENSGALG00000034661 44524 0.827 - - - - - - 0.827 - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
77. EIF4A2 ENSGALG00000008684 58507 0.826 - - - - - - 0.826 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
78. UBE2G2 ENSGALG00000005667 12689 0.824 - - - - - - 0.824 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
79. QTRTD1 QTRTD1 10765 0.824 - - - - - - 0.824 - - -
80. AP1M1 ENSGALG00000003959 31761 0.822 - - - - - - - 0.822 - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
81. SNRNP40 ENSGALG00000000615 32298 0.821 - - - - - - 0.821 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
82. TOMM20 ENSGALG00000035299 23431 0.821 - - - - - - 0.821 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
83. CNI CNI 18453 0.819 - - - - - - 0.819 - - -
84. SKP2 ENSGALG00000003547 14637 0.819 - - - - - - 0.819 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
85. RRP9 ENSGALG00000043359 9747 0.818 - - - - - - 0.818 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
86. UTP6 ENSGALG00000003260 4909 0.816 - - - - - - 0.816 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
87. RPL7L1 ENSGALG00000011974 20292 0.816 - - - - - - 0.816 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
88. WDR61 ENSGALG00000003221 11352 0.816 - - - - - - 0.816 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
89. SIKE1 ENSGALG00000002147 20836 0.815 - - - - - - 0.815 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
90. RPL35 ENSGALG00000035677 252113 0.815 - - - - - - 0.815 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
91. TIMM17A ENSGALG00000000086 19205 0.814 - - - - - - 0.814 - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
92. EMG1 ENSGALG00000014568 8102 0.814 - - - - - - 0.814 - - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
93. VPS35 ENSGALG00000004375 8059 0.813 - - - - - - 0.813 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
94. ATP2B1 ENSGALG00000030550 15123 0.812 - - - - - - 0.812 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
95. PSPC1 ENSGALG00000017142 13036 0.812 - - - - - - 0.812 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
96. SBNO1 ENSGALG00000003392 6731 0.811 - - - - - - 0.811 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
97. PTP4A2 ENSGALG00000003265 24826 0.81 - - - - - - 0.810 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
98. RANBP1 ENSGALG00000002107 17715 0.81 - - - - - - 0.810 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
99. TRAPPC2 ENSGALG00000016578 8749 0.809 - - - - - - 0.809 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
100. GOLGA7 ENSGALG00000003483 26525 0.808 - - - - - - 0.808 - - - golgin A7 [Source:NCBI gene;Acc:426787]

There are 491 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA