Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL55

Gene Name Gene ID Reads Annotation
MRPL55 5995 mitochondrial ribosomal protein L55











Genes with expression patterns similar to MRPL55

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPL55 5995 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L55
2. UTP18 ENSGALG00000002985 7129 2.359 - - - 0.830 0.783 - - 0.746 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
3. PPFIA1 ENSGALG00000035774 5258 2.252 - - - 0.758 - - 0.701 0.793 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
4. CDC42BPB ENSGALG00000011432 8220 2.239 - - - 0.707 - - 0.715 0.817 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
5. CCNG2 ENSGALG00000010347 9122 2.191 - - - - 0.740 - 0.706 0.745 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
6. ABCD2 ENSGALG00000042554 1607 1.624 - - - 0.793 0.831 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
7. PAPSS1 ENSGALG00000010542 5631 1.578 - - - - - - 0.779 0.799 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
8. NCBP2_1 ENSGALG00000006843 7170 1.577 - - - - 0.763 - - 0.814 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
9. RPA3 ENSGALG00000010700 6212 1.567 - - - - 0.861 - - 0.706 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
10. KIAA1143 ENSGALG00000035952 6735 1.565 - - - 0.790 - - - 0.775 - - KIAA1143 [Source:NCBI gene;Acc:420709]
11. DCPS ENSGALG00000031143 10191 1.565 - - - - - - 0.739 0.826 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
12. FLCN ENSGALG00000004816 4101 1.561 - - - - 0.816 - - 0.745 - - folliculin, transcript variant X1
13. SLC27A4 ENSGALG00000004965 3278 1.56 - - - 0.799 0.761 - - - - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
14. DPY30 ENSGALG00000010621 6818 1.558 - - - 0.820 - - - 0.738 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
15. MRPS22 ENSGALG00000005367 8307 1.557 - - - - 0.767 - - 0.790 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
16. NDUFAF6 ENSGALG00000040366 1647 1.552 - - - 0.753 0.799 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:HGNC Symbol;Acc:HGNC:28625]
17. DNAJA4 ENSGALG00000036850 6847 1.548 - - - - - - 0.772 0.776 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
18. GNAI2 ENSGALG00000035645 9535 1.544 - - - - - - 0.783 0.761 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
19. C11H16ORF80 C11H16ORF80 18673 1.542 - - - - - - 0.754 0.788 - -
20. MRPL2 ENSGALG00000008597 16500 1.54 - - - - 0.763 - - 0.777 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
21. MRPS30 ENSGALG00000014874 3416 1.539 - - - 0.802 - - 0.737 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
22. MOSPD1 ENSGALG00000006132 8503 1.537 - - - 0.787 0.750 - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
23. RFC5 ENSGALG00000026517 26113 1.528 - - - - 0.746 - 0.782 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
24. MED7 ENSGALG00000003870 4244 1.526 - - - 0.723 0.803 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
25. DUS2 856 1.526 - - - - 0.825 - - 0.701 - - dihydrouridine synthase 2, transcript variant X2
26. GLRX3 ENSGALG00000010464 22578 1.525 - - - 0.763 - - 0.762 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
27. NDUFAF7 ENSGALG00000010609 2765 1.516 - - - - - - 0.795 0.721 - - NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]
28. MDFIC ENSGALG00000026838 3881 1.516 - - - - - - 0.798 0.718 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
29. CTCF 10811 1.515 - - - - - - 0.779 - - 0.736 CCCTC-binding factor, transcript variant X2
30. SKAP2 ENSGALG00000030081 13746 1.512 - - - - 0.730 - 0.782 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
31. FAM63B 3793 1.509 - - - - - - 0.748 0.761 - - family with sequence similarity 63 member B
32. HERC2 ENSGALG00000016739 9900 1.502 - - - 0.775 - - 0.727 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
33. INCENP ENSGALG00000007537 16617 1.502 - - - - - - 0.742 0.760 - - inner centromere protein [Source:NCBI gene;Acc:396270]
34. ABHD17B ENSGALG00000015139 2805 1.501 - - - 0.780 - - 0.721 - - - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
35. PPP1CC ENSGALG00000004571 14748 1.499 - - - - 0.776 - 0.723 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
36. AAMP ENSGALG00000011445 2528 1.499 - - - 0.736 - - 0.763 - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
37. CDK2AP1 ENSGALG00000034919 5469 1.498 - - - - - - 0.781 0.717 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
38. CHRAC1 ENSGALG00000040823 5695 1.497 - - - - - - 0.709 0.788 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
39. CNOT11 ENSGALG00000039563 11251 1.489 - - - - - - 0.735 0.754 - - CCR4-NOT transcription complex subunit 11
40. MED17 ENSGALG00000017218 5821 1.489 - - - - - - 0.773 - - 0.716 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
41. PCM1 ENSGALG00000013602 6347 1.488 - - - - - - 0.716 0.772 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
42. ENSGALG00000001398 ENSGALG00000001398 3248 1.487 - - - - - - 0.741 0.746 - -
43. ATG16L1 ENSGALG00000001619 3562 1.484 - - - 0.765 - - 0.719 - - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
44. ATG4B ENSGALG00000006298 2288 1.482 - - - 0.766 - - - - - 0.716 autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
45. HMG20A ENSGALG00000041641 5818 1.478 - - - - - - 0.711 0.767 - - high mobility group 20A [Source:NCBI gene;Acc:415346]
46. ENSGALG00000007514 ENSGALG00000007514 4866 1.476 - - - 0.735 - - - 0.741 - -
47. MFAP1 ENSGALG00000028295 6043 1.474 - - - - - - 0.702 0.772 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
48. SRSF11 ENSGALG00000011305 10435 1.471 - - - 0.713 - - - 0.758 - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
49. R3HDM1 ENSGALG00000012246 6580 1.468 - - - - - - 0.704 0.764 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
50. SPCS1 ENSGALG00000001655 7718 1.466 - - - - - - 0.726 0.740 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
51. ADI1 ENSGALG00000025796 8636 1.462 - - - - - - 0.746 0.716 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
52. CCNC ENSGALG00000015471 6497 1.461 - - - - 0.725 - - 0.736 - - cyclin C [Source:NCBI gene;Acc:421791]
53. CENPK ENSGALG00000014753 12414 1.46 - - - - - - 0.736 0.724 - - centromere protein K [Source:NCBI gene;Acc:427162]
54. PFKL ENSGALG00000006543 4361 1.456 - - - 0.749 - - - 0.707 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
55. COX17 ENSGALG00000014981 5646 1.456 - - - - - - 0.702 0.754 - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
56. TMEM68 ENSGALG00000031835 1691 1.456 - - - - 0.751 - - 0.705 - - transmembrane protein 68 [Source:NCBI gene;Acc:421124]
57. TFB2M ENSGALG00000010651 4374 1.453 - - - - - - 0.750 0.703 - - transcription factor B2, mitochondrial
58. SCPEP1 ENSGALG00000003185 2322 1.453 - - - 0.741 - - - 0.712 - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
59. ATR ENSGALG00000002663 4626 1.451 - - - 0.731 - - - 0.720 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
60. RBM22 ENSGALG00000004555 4882 1.45 - - - - - - 0.730 0.720 - - RNA binding motif protein 22 [Source:NCBI gene;Acc:416270]
61. FAM18B1 ENSGALG00000001335 5177 1.447 - - - - - - 0.707 0.740 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
62. PSMF1 ENSGALG00000000259 5782 1.446 - - - - 0.711 - - 0.735 - - proteasome inhibitor subunit 1 [Source:NCBI gene;Acc:430115]
63. SEC22A ENSGALG00000011697 7981 1.445 - - - - - - 0.733 0.712 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
64. RSF1 ENSGALG00000039068 3438 1.445 - - - 0.726 - - - 0.719 - - remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:HGNC:18118]
65. UBFD1 ENSGALG00000006117 5242 1.444 - - - - - - 0.723 0.721 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
66. ADSL ENSGALG00000012034 10280 1.443 - - - - - - 0.720 0.723 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
67. CHM ENSGALG00000006906 4953 1.436 - - - 0.735 - - - 0.701 - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
68. PHTF1 ENSGALG00000001845 3276 1.435 - - - 0.727 - - - 0.708 - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
69. ZMYM2 ENSGALG00000017139 3747 1.423 - - - - 0.710 - - 0.713 - - zinc finger MYM-type containing 2, transcript variant X10
70. YIPF6 ENSGALG00000035973 3333 1.423 - - - 0.717 - - - 0.706 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
71. SSR2 ENSGALG00000000764 32190 1.422 - - - 0.713 - - - 0.709 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
72. ASH2L ENSGALG00000003233 4814 1.422 - - - - - - 0.709 0.713 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
73. GNG12 ENSGALG00000026591 5817 1.42 - - - - 0.700 - 0.720 - - - G protein subunit gamma 12, transcript variant X21
74. ENSGALG00000020510 ENSGALG00000020510 4037 1.405 - - - - - - 0.700 0.705 - -
75. ZNF618 ENSGALG00000008886 1326 1.404 - - - - 0.704 - - - - 0.700 zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
76. PDIA5 ENSGALG00000011689 6913 0.876 - - - - 0.876 - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
77. ORC4 ENSGALG00000012448 8405 0.869 - - - - 0.869 - - - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
78. CAMLG ENSGALG00000006411 662 0.868 - - - - 0.868 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
79. AVL9 ENSGALG00000041568 1558 0.868 - - - - 0.868 - - - - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
80. GLT8D1 ENSGALG00000001642 4232 0.859 - - - - 0.859 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
81. PIGN ENSGALG00000012903 853 0.856 - - - - 0.856 - - - - - phosphatidylinositol glycan anchor biosynthesis class N [Source:HGNC Symbol;Acc:HGNC:8967]
82. SRSF4 1200 0.853 - - - - 0.853 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
83. CCDC6 ENSGALG00000003165 93 0.851 - - - - 0.851 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
84. MOCS3 ENSGALG00000007986 308 0.851 - - - - 0.851 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
85. AARSD1 ENSGALG00000002880 3068 0.851 - - - - 0.851 - - - - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
86. PAQR8 ENSGALG00000016675 85 0.851 - - - - 0.851 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
87. CANT1 ENSGALG00000011822 2218 0.851 - - - - 0.851 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
88. CECR1 336 0.849 - - - - 0.849 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
89. FAM171B ENSGALG00000002646 837 0.846 - - - - 0.846 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
90. KIAA1407 KIAA1407 252 0.845 - - - - 0.845 - - - - -
91. KCNC4 ENSGALG00000000400 129 0.845 - - - - 0.845 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
92. PPM1M ENSGALG00000033277 556 0.844 - - - - 0.844 - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
93. STON2 ENSGALG00000010579 76 0.843 - - - - 0.843 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
94. BBX ENSGALG00000015353 1281 0.842 - - - - 0.842 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
95. ASTE1 ENSGALG00000036171 155 0.842 - - - - 0.842 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
96. TAC1 ENSGALG00000009737 2211 0.842 - - - - 0.842 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
97. ENSGALG00000022967 ENSGALG00000022967 240 0.842 - - - - 0.842 - - - - -
98. SCAF4 ENSGALG00000033965 2027 0.841 - - - - 0.841 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
99. CADM3 ENSGALG00000036925 1753 0.841 - - - - 0.841 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
100. HSCB ENSGALG00000005706 12953 0.84 - - - - - - - 0.840 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]

There are 844 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA