Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL54

Gene Name Gene ID Reads Annotation
MRPL54 ENSGALG00000027611 39450 mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]











Genes with expression patterns similar to MRPL54

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPL54 ENSGALG00000027611 39450 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
2. CETN1 ENSGALG00000026741 7243 1.771 - - - - - - 0.838 0.933 - - centrin 1 [Source:NCBI gene;Acc:422668]
3. RFC3 ENSGALG00000017064 7011 1.751 - - - - - - 0.800 0.951 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
4. EXO1 ENSGALG00000010748 7572 1.747 - - - - - - 0.814 0.933 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
5. RCOR3 ENSGALG00000009871 7022 1.714 - - - - - - 0.778 0.936 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
6. SBNO1 ENSGALG00000003392 6731 1.71 - - - - - - 0.816 0.894 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
7. ENSGALG00000017396 ENSGALG00000017396 9028 1.68 - - - - - - 0.835 0.845 - -
8. CDCA7 ENSGALG00000040833 7484 1.678 - - - - - - 0.743 0.935 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
9. TMEM126A ENSGALG00000014066 6149 1.671 - - - - - - 0.735 0.936 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
10. RBM7 ENSGALG00000007017 8779 1.66 - - - - - - 0.726 0.934 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
11. PDHB ENSGALG00000029576 12254 1.66 - - - - - - 0.728 0.932 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
12. KIAA0196 KIAA0196 4011 1.66 - - - - - - 0.759 0.901 - -
13. FUNDC2 ENSGALG00000029585 9334 1.647 - - - - - - 0.711 0.936 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
14. NVL ENSGALG00000009322 5286 1.643 - - - - - - 0.708 0.935 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
15. XRCC5 ENSGALG00000011492 6802 1.642 - - - - - - 0.777 0.865 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
16. TRIP12 ENSGALG00000002929 11713 1.638 - - - - - - 0.787 0.851 - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
17. FAM98A ENSGALG00000010428 9585 1.608 - - - - - - 0.773 0.835 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
18. TNFAIP8L1 ENSGALG00000004266 12611 1.596 - - - - - - 0.760 0.836 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
19. GTF2H5 ENSGALG00000013733 12293 1.499 - - - - - - 0.728 0.771 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
20. GARS ENSGALG00000005694 18264 0.953 - - - - - - - 0.953 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
21. CHD4 ENSGALG00000013565 25695 0.952 - - - - - - - 0.952 - - chromodomain helicase DNA binding protein 4
22. G3BP2 ENSGALG00000010882 21129 0.937 - - - - - - - 0.937 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
23. PPM1D ENSGALG00000035610 6530 0.935 - - - - - - - 0.935 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
24. MAP2K2 ENSGALG00000001267 3857 0.935 - - - - - - - 0.935 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
25. TMEM192 ENSGALG00000009528 2428 0.935 - - - - - - - 0.935 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
26. C6ORF192 C6ORF192 4224 0.934 - - - - - - - 0.934 - -
27. gga-mir-6587 ENSGALG00000026386 9441 0.934 - - - - - - - 0.934 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
28. TTL ENSGALG00000008614 3991 0.934 - - - - - - - 0.934 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
29. CENPL ENSGALG00000038411 4867 0.934 - - - - - - - 0.934 - - centromere protein L [Source:NCBI gene;Acc:426563]
30. SLC25A39 ENSGALG00000042894 10654 0.934 - - - - - - - 0.934 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
31. RNFT1 ENSGALG00000005205 2888 0.933 - - - - - - - 0.933 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
32. ATE1 ENSGALG00000009502 3751 0.933 - - - - - - - 0.933 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
33. ALS2 ENSGALG00000008415 2576 0.932 - - - - - - - 0.932 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
34. CRNKL1 ENSGALG00000008429 7280 0.932 - - - - - - - 0.932 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
35. SLC35D1 ENSGALG00000011121 4456 0.932 - - - - - - - 0.932 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
36. RFT1 ENSGALG00000001945 2446 0.932 - - - - - - - 0.932 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
37. NBL1 ENSGALG00000040297 8165 0.932 - - - - - - - 0.932 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
38. MCTS1 ENSGALG00000008517 27514 0.932 - - - - - - 0.932 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
39. CRELD2 ENSGALG00000008551 2084 0.931 - - - - - - - 0.931 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
40. PIGL ENSGALG00000004492 669 0.931 - - - - - - - 0.931 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
41. ZNF319 ENSGALG00000000999 1272 0.931 - - - - - - - 0.931 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
42. PMP22 ENSGALG00000031425 5358 0.931 - - - - - - - 0.931 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
43. ENSGALG00000012250 ENSGALG00000012250 581 0.93 - - - - - - - 0.930 - -
44. ELAVL4 ENSGALG00000010533 4978 0.93 - - - - - - - 0.930 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
45. SNIP1 ENSGALG00000002010 1429 0.93 - - - - - - - 0.930 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
46. SPDYA ENSGALG00000017392 503 0.93 - - - - - - - 0.930 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
47. ATP2B4 ENSGALG00000003601 3746 0.929 - - - - - - - 0.929 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
48. SFT2D1 ENSGALG00000020005 10855 0.929 - - - - - - - 0.929 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
49. RNF168 ENSGALG00000006392 507 0.929 - - - - - - - 0.929 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
50. PDCD6IP ENSGALG00000033500 580 0.929 - - - - - - - 0.929 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
51. RAI2 ENSGALG00000016538 1074 0.929 - - - - - - - 0.929 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
52. FBF1 ENSGALG00000002179 1738 0.929 - - - - - - - 0.929 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
53. JSC JSC 7982 0.927 - - - - - - - 0.927 - -
54. DLC1 ENSGALG00000013715 5297 0.926 - - - - - - - 0.926 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
55. RBBP4 ENSGALG00000003522 72455 0.926 - - - - - - 0.926 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
56. AP2B1 ENSGALG00000042125 13229 0.925 - - - - - - - 0.925 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
57. PPP3R1 ENSGALG00000023648 3417 0.925 - - - - - - - 0.925 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
58. YAF2 ENSGALG00000009540 8452 0.922 - - - - - - - 0.922 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
59. COX7A2L ENSGALG00000037996 13646 0.921 - - - - - - - 0.921 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
60. GLRX3 ENSGALG00000010464 22578 0.92 - - - - - - 0.920 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
61. IFNAR2 ENSGALG00000041867 1596 0.919 - - - - - - - 0.919 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
62. CASP3 ENSGALG00000010638 11572 0.914 - - - - - - 0.914 - - - caspase 3 [Source:NCBI gene;Acc:395476]
63. EIF2B EIF2B 28702 0.911 - - - - - - 0.911 - - -
64. YWHAZ ENSGALG00000031387 84985 0.91 - - - - - - 0.910 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
65. EIF4A2 ENSGALG00000008684 58507 0.908 - - - - - - 0.908 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
66. XPO5 ENSGALG00000010341 24765 0.908 - - - - - - - 0.908 - - exportin 5 [Source:NCBI gene;Acc:421450]
67. SNRNP40 ENSGALG00000000615 32298 0.906 - - - - - - 0.906 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
68. PSMD12 ENSGALG00000026225 17473 0.904 - - - - - - 0.904 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
69. SRRM1 ENSGALG00000001283 23820 0.902 - - - - - - 0.902 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
70. CPSF6 ENSGALG00000019355 7634 0.9 - - - - - - 0.900 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
71. KDM5B ENSGALG00000038948 50645 0.898 - - - - - - 0.898 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
72. RAD21 ENSGALG00000029523 25658 0.898 - - - - - - 0.898 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
73. PSMD3 ENSGALG00000033162 25615 0.895 - - - - - - 0.895 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
74. TPD52 ENSGALG00000040167 9891 0.894 - - - - - - - 0.894 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
75. SMC4 ENSGALG00000009553 15715 0.891 - - - - - - 0.891 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
76. PRTG ENSGALG00000037336 34665 0.891 - - - - - - - 0.891 - - protogenin [Source:NCBI gene;Acc:415407]
77. LRPPRC ENSGALG00000009967 17091 0.891 - - - - - - - 0.891 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
78. INPP5A ENSGALG00000010493 6769 0.89 - - - - - - - 0.890 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
79. RPS3A ENSGALG00000010077 292185 0.889 - - - - - - 0.889 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
80. WDR61 ENSGALG00000003221 11352 0.889 - - - - - - 0.889 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
81. ANKRD11 ENSGALG00000006222 12327 0.888 - - - - - - - 0.888 - - ankyrin repeat domain 11, transcript variant X2
82. NUP107 ENSGALG00000009934 2097 0.888 - - - - - - - 0.888 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
83. RPL35 ENSGALG00000035677 252113 0.887 - - - - - - 0.887 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
84. ENY2 ENSGALG00000036618 30314 0.886 - - - - - - 0.886 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
85. NXN 20202 0.885 - - - - - - 0.885 - - - nucleoredoxin, transcript variant X1
86. GTPBP4 ENSGALG00000006703 16183 0.885 - - - - - - 0.885 - - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
87. COX7C ENSGALG00000027963 84312 0.885 - - - - - - 0.885 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
88. PHAX ENSGALG00000014691 8114 0.884 - - - - - - 0.884 - - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
89. RANBP1 ENSGALG00000002107 17715 0.884 - - - - - - 0.884 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
90. RPL7L1 ENSGALG00000011974 20292 0.882 - - - - - - 0.882 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
91. GSPT1 15580 0.882 - - - - - - 0.882 - - - G1 to S phase transition 1, transcript variant X1
92. GLO1 ENSGALG00000010127 31662 0.879 - - - - - - 0.879 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
93. BUB1 ENSGALG00000008233 11536 0.878 - - - - - - 0.878 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
94. RRP9 ENSGALG00000043359 9747 0.877 - - - - - - 0.877 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
95. ZNF593 ENSGALG00000000542 79105 0.876 - - - - - - 0.876 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
96. PTP4A2 ENSGALG00000003265 24826 0.876 - - - - - - 0.876 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
97. RPL36AL ENSGALG00000004952 205590 0.875 - - - - - - 0.875 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
98. VPS35 ENSGALG00000004375 8059 0.875 - - - - - - 0.875 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
99. TXNDC17 ENSGALG00000027950 45004 0.874 - - - - - - 0.874 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
100. ASF1A ENSGALG00000014887 11319 0.874 - - - - - - 0.874 - - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]

There are 901 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA