Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL53

Gene Name Gene ID Reads Annotation
MRPL53 ENSGALG00000037867 6100 mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]











Genes with expression patterns similar to MRPL53

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPL53 ENSGALG00000037867 6100 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
2. SALL4 ENSGALG00000041365 6760 2.152 - - 0.701 - - - 0.711 0.740 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
3. TXNL1 ENSGALG00000033862 13899 1.675 - - - - - - 0.790 0.885 - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
4. MRPS18C ENSGALG00000023191 6293 1.619 - - 0.765 - - - - 0.854 - - mitochondrial ribosomal protein S18C [Source:NCBI gene;Acc:770813]
5. MED17 ENSGALG00000017218 5821 1.588 - - - - - - 0.772 0.816 - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
6. AP4E1 2726 1.576 - - - - - - 0.746 0.830 - - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
7. PDRG1 ENSGALG00000035111 9863 1.574 - - - - - - 0.768 0.806 - - p53 and DNA damage regulated 1 [Source:HGNC Symbol;Acc:HGNC:16119]
8. RSL1D1 ENSGALG00000033690 13638 1.569 - - 0.788 - - - 0.781 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
9. NDUFS1 ENSGALG00000008606 7898 1.558 - - 0.747 - - - 0.811 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
10. ASAP1 ENSGALG00000037618 2887 1.558 - - - - - - 0.774 0.784 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
11. CBLL1 ENSGALG00000038981 6725 1.552 - - - - - - 0.773 0.779 - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
12. RBBP8 ENSGALG00000014982 3255 1.547 - - - - - - 0.747 0.800 - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
13. gga-mir-7476 gga-mir-7476 20209 1.539 - - - - - - 0.806 0.733 - -
14. SF3A2 ENSGALG00000021679 12580 1.538 - - - - - - 0.749 0.789 - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
15. THOP1 ENSGALG00000041934 10122 1.535 - - - - - - 0.714 0.821 - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
16. MYCL ENSGALG00000024047 10367 1.533 - - - - - - 0.716 0.817 - - MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
17. ALDH7A1 ENSGALG00000008229 5891 1.533 - - 0.722 - - - - 0.811 - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
18. ANKRA2 ENSGALG00000013511 3460 1.524 - - - - - - 0.704 0.820 - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
19. C1orf174 ENSGALG00000000975 4947 1.514 - - 0.754 - - - 0.760 - - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
20. KIAA0196 KIAA0196 4011 1.512 - - 0.740 - - - 0.772 - - -
21. SNX4 ENSGALG00000012052 11634 1.511 - - - - - - 0.729 0.782 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
22. NDUFA12 ENSGALG00000011325 19807 1.509 - - - - - - 0.797 0.712 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
23. UBE2D1 ENSGALG00000021213 5876 1.497 - - - - - - 0.791 - 0.706 - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
24. C4BPA ENSGALG00000001175 4278 1.475 - - - - - - 0.760 0.715 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
25. ENSGALG00000005727 ENSGALG00000005727 4334 1.475 - - - - - - 0.702 0.773 - -
26. ARL13B ENSGALG00000015412 2968 1.454 - - 0.732 - - - 0.722 - - - ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
27. FBXL17 ENSGALG00000000276 2443 1.439 - - 0.726 - - - 0.713 - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
28. SGOL1 SGOL1 3919 1.437 - - 0.710 - - - 0.727 - - -
29. RFC3 ENSGALG00000017064 7011 1.437 - - 0.715 - - - 0.722 - - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
30. ERBB2IP ERBB2IP 5800 0.894 - - - - - - 0.894 - - -
31. UBE2V1 ENSGALG00000008015 17947 0.873 - - - - - - 0.873 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
32. TNFAIP8L1 ENSGALG00000004266 12611 0.871 - - - - - - 0.871 - - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
33. POP5 ENSGALG00000007124 10365 0.87 - - - - - - - 0.870 - - POP5 homolog, ribonuclease P/MRP subunit [Source:HGNC Symbol;Acc:HGNC:17689]
34. ADAT2 ENSGALG00000019976 4169 0.869 - - - - - - - 0.869 - - adenosine deaminase, tRNA specific 2
35. NEK7 ENSGALG00000002216 4532 0.866 - - - - - - - 0.866 - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
36. MSMO1 ENSGALG00000009560 6928 0.863 - - - - - - 0.863 - - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
37. HNRNPD ENSGALG00000011184 10686 0.859 - - - - - - 0.859 - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
38. DCAF12 ENSGALG00000005800 6419 0.858 - - - - - - 0.858 - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
39. MYST2 MYST2 8078 0.857 - - - - - - - 0.857 - -
40. C7orf50 ENSGALG00000004055 5786 0.856 - - - - - - - 0.856 - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
41. TMEM126A ENSGALG00000014066 6149 0.855 - - - - - - 0.855 - - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
42. SLC35B1 ENSGALG00000035057 10683 0.854 - - - - - - - 0.854 - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
43. HDDC2 ENSGALG00000014841 7674 0.852 - - - - - - 0.852 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
44. RALGPS1 ENSGALG00000000906 7207 0.852 - - - - - - - 0.852 - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
45. CUL3 ENSGALG00000005108 9571 0.851 - - - - - - 0.851 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
46. RANBP10 ENSGALG00000001439 4003 0.85 - - - - - - - 0.850 - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
47. C15ORF23 C15ORF23 14264 0.849 - - - - - - - 0.849 - -
48. SACS ENSGALG00000017120 4906 0.849 - - - - - - - 0.849 - - sacsin molecular chaperone [Source:HGNC Symbol;Acc:HGNC:10519]
49. RPB6 RPB6 9517 0.847 - - - - - - 0.847 - - -
50. METTL16 ENSGALG00000014901 3720 0.845 - - - - - - - 0.845 - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
51. TMX3 ENSGALG00000013757 6387 0.844 - - - - - - 0.844 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
52. TCF25 ENSGALG00000000129 7587 0.842 - - - - - - - 0.842 - - transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
53. YWHAZ ENSGALG00000031387 84985 0.84 - - - - - - 0.840 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
54. RABGGTB ENSGALG00000011388 11654 0.84 - - - - - - 0.840 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
55. CDCA7 ENSGALG00000040833 7484 0.839 - - - - - - 0.839 - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
56. FAM160B1 ENSGALG00000031404 3153 0.839 - - - - - - 0.839 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
57. TMLHE ENSGALG00000007443 3619 0.838 - - - - - - - 0.838 - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
58. MYCBP ENSGALG00000024295 13273 0.836 - - - - - - - 0.836 - - MYC binding protein
59. GTF2A2 ENSGALG00000003793 5957 0.835 - - - - - - 0.835 - - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
60. FANCL ENSGALG00000030022 7423 0.835 - - - - - - 0.835 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
61. RPS28 ENSGALG00000024398 244056 0.834 - - - - - - 0.834 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
62. ZFR ENSGALG00000003235 8466 0.833 - - - - - - - 0.833 - - zinc finger RNA binding protein, transcript variant X3
63. FBXO5 ENSGALG00000013607 6156 0.833 - - - - - - 0.833 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
64. EAPP ENSGALG00000010007 5080 0.832 - - - - - - - 0.832 - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
65. SPINZ SPINZ 10341 0.831 - - - - - - 0.831 - - -
66. YARS ENSGALG00000003563 11093 0.831 - - - - - - - 0.831 - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
67. MAP4K5 ENSGALG00000012321 3036 0.831 - - - - - - 0.831 - - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
68. MRPL20 ENSGALG00000001542 28764 0.83 - - - - - - 0.830 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
69. TSC22D2 ENSGALG00000027591 6594 0.83 - - - - - - 0.830 - - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
70. ATG5 ENSGALG00000015387 7752 0.83 - - - - - - 0.830 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
71. RNF8 ENSGALG00000023256 5495 0.83 - - - - - - - 0.830 - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
72. OPA1 ENSGALG00000007150 5488 0.829 - - - - - - - 0.829 - - OPA1, mitochondrial dynamin like GTPase [Source:NCBI gene;Acc:424900]
73. HSPA4 ENSGALG00000040882 20966 0.829 - - - - - - 0.829 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
74. BTAF1 ENSGALG00000030598 3556 0.829 - - - - - - - 0.829 - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
75. RNF114 ENSGALG00000008021 6078 0.828 - - - - - - - 0.828 - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
76. SCAMP5 ENSGALG00000014116 8877 0.828 - - - - - - - 0.828 - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
77. RCOR3 ENSGALG00000009871 7022 0.828 - - - - - - 0.828 - - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
78. MRPL15 ENSGALG00000041086 16820 0.827 - - - - - - 0.827 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
79. PSMD7 ENSGALG00000000707 26350 0.826 - - - - - - - 0.826 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
80. POLA1 ENSGALG00000016312 9440 0.826 - - - - - - - 0.826 - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
81. GNMT ENSGALG00000043290 3288 0.826 - - 0.826 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
82. RTCB ENSGALG00000012611 14360 0.825 - - - - - - 0.825 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
83. RBM17 ENSGALG00000006332 12656 0.823 - - - - - - 0.823 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
84. AKAP9 ENSGALG00000040724 7446 0.823 - - - - - - - 0.823 - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
85. LLPH ENSGALG00000019358 20976 0.822 - - - - - - 0.822 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
86. CCNDBP1 ENSGALG00000004837 11520 0.822 - - - - - - 0.822 - - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
87. CTSL2 CTSL2 7966 0.82 - - - - - - 0.820 - - -
88. GRPEL1 ENSGALG00000015549 11246 0.82 - - - - - - 0.820 - - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
89. SEPSECS ENSGALG00000014386 2611 0.82 - - - - - - - 0.820 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:NCBI gene;Acc:422808]
90. SRP68 ENSGALG00000002062 7370 0.82 - - - - - - - 0.820 - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
91. AP3M2 ENSGALG00000038155 3372 0.819 - - - - - - - 0.819 - - adaptor related protein complex 3 subunit mu 2 [Source:HGNC Symbol;Acc:HGNC:570]
92. CZH9ORF80 CZH9ORF80 12760 0.819 - - - - - - 0.819 - - -
93. UQCRH ENSGALG00000017380 55734 0.819 - - - - - - 0.819 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
94. EIF2B2 ENSGALG00000010301 10772 0.819 - - - - - - - 0.819 - - eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
95. KIF2C ENSGALG00000010120 8999 0.818 - - - - - - 0.818 - - - kinesin family member 2C, transcript variant X1
96. PTCH1 ENSGALG00000012620 4840 0.817 - - - - - - - 0.817 - - patched 1 [Source:NCBI gene;Acc:395806]
97. RIOK2 ENSGALG00000015288 6280 0.816 - - - - - - 0.816 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
98. TRAF7 ENSGALG00000005767 4615 0.816 - - - - - - - 0.816 - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
99. MADH2 MADH2 13017 0.816 - - - - - - 0.816 - - -
100. RUVBL1 ENSGALG00000005931 9379 0.815 - - - - - - 0.815 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]

There are 742 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA