Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MRPL53

Gene Name Gene ID Reads Annotation
MRPL53 ENSDARG00000008920 147 mitochondrial ribosomal protein L53 [Source:ZFIN;Acc:ZDB-GENE-040912-93]










Genes with expression patterns similar to MRPL53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MRPL53 ENSDARG00000008920 147 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L53 [Source:ZFIN;Acc:ZDB-GENE-040912-93]
2. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.649 - 0.879 - - - - 0.770 - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
3. asb5b ENSDARG00000053222 1207 1.62 - 0.853 - - - - 0.767 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
4. mrps9 ENSDARG00000061505 1636 1.615 - 0.769 - - - - 0.846 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
5. sh3bgr ENSDARG00000021633 3498 1.597 - 0.852 - - - - 0.745 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
6. zgc:66479 ENSDARG00000008732 3347 1.589 - 0.818 - - - - 0.771 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
7. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.588 - 0.834 - - - - 0.754 - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
8. LRRC14B ENSDARG00000060788 363 1.586 - 0.792 - - - - 0.794 - - leucine rich repeat containing 14B [Source:ZFIN;Acc:ZDB-GENE-060503-910]
9. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 1.586 - 0.827 - - - - 0.759 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
10. mdm1 ENSDARG00000045675 64 1.559 - - - - - - 0.797 0.762 - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
11. ppp1r14c ENSDARG00000077341 1587 1.551 - 0.762 - - - - 0.789 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
12. efcab2 ENSDARG00000074323 88 1.549 - 0.762 - - - - - 0.787 - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
13. alpk3a ENSDARG00000078989 1992 1.543 - 0.798 - - - - 0.745 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
14. minal minal 383 1.543 - 0.747 - - - - 0.796 - -
15. txlnbb ENSDARG00000076241 6396 1.541 - 0.820 - - - - 0.721 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
16. mlf1 ENSDARG00000077301 789 1.541 - 0.823 - - - - 0.718 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
17. NRAP ENSDARG00000009341 3565 1.53 - 0.821 - - - - 0.709 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
18. stac3 ENSDARG00000098883 1765 1.525 - 0.800 - - - - 0.725 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
19. ntmt1 ENSDARG00000022399 5779 1.52 - 0.791 - - - - 0.729 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
20. ddx49 ENSDARG00000012899 1604 1.511 - 0.778 - - - - 0.733 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
21. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 1.507 - 0.796 - - - - 0.711 - - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
22. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.496 - 0.774 - - - - 0.722 - -
23. gmpr ENSDARG00000016160 1537 1.488 - 0.773 - - - - 0.715 - - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
24. kal1b kal1b 495 1.483 - 0.718 - - - - 0.765 - -
25. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.482 - 0.734 - - - - 0.748 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
26. mcamb ENSDARG00000005368 1660 1.475 - 0.764 - - - - 0.711 - - melanoma cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030219-213]
27. hhatla ENSDARG00000039051 6598 1.472 - 0.758 - - - - 0.714 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
28. spop ENSDARG00000100519 177 1.471 - 0.707 - - - - 0.764 - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
29. mrrf ENSDARG00000034174, ENSDARG00000115754 791 1.467 - 0.700 - - - - 0.767 - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
30. pcmt ENSDARG00000015201 5132 1.464 - 0.760 - - - - 0.704 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
31. cmya5 ENSDARG00000061379 1423 1.454 - 0.730 - - - - 0.724 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
32. ssbp1 ENSDARG00000039350 809 1.442 - 0.723 - - - - 0.719 - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
33. pdss1 ENSDARG00000017910 1290 1.427 - 0.712 - - - - 0.715 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
34. tlk1a ENSDARG00000042467 2339 1.424 - 0.717 - - - - 0.707 - - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
35. plod2 ENSDARG00000011821 1656 0.916 - 0.916 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
36. akap6 ENSDARG00000077295 1382 0.914 - 0.914 - - - - - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
37. nop2 ENSDARG00000043304 2511 0.895 - - - - - - 0.895 - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
38. aqp4 ENSDARG00000010565 624 0.893 - 0.893 - - - - - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
39. tnc ENSDARG00000021948, ENSDARG00000113518 12162 0.884 - 0.884 - - - - - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
40. pdcd2l ENSDARG00000002754 417 0.883 - - - - - - 0.883 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
41. TMEM102 ENSDARG00000087162 312 0.882 - - - - - - 0.882 - - transmembrane protein 102 [Source:HGNC Symbol;Acc:HGNC:26722]
42. BX530018.3 ENSDARG00000107022 614 0.882 - 0.882 - - - - - - -
43. znf648 ENSDARG00000104823 1918 0.879 - 0.879 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
44. mthfr ENSDARG00000053087 373 0.877 - 0.877 - - - - - - - methylenetetrahydrofolate reductase (NAD(P)H) [Source:ZFIN;Acc:ZDB-GENE-041111-215]
45. nrip2 ENSDARG00000079985 505 0.876 - 0.876 - - - - - - - nuclear receptor interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9425]
46. rpp30 ENSDARG00000027428 286 0.876 - 0.876 - - - - - - - ribonuclease P/MRP 30 subunit [Source:ZFIN;Acc:ZDB-GENE-050320-45]
47. foxn3 ENSDARG00000012833 169 0.874 - - - - - 0.874 - - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
48. ehbp1l1b ENSDARG00000079895 559 0.869 - 0.869 - - - - - - - EH domain binding protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-091204-238]
49. mybbp1a ENSDARG00000078214 2458 0.865 - 0.865 - - - - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
50. eya4 ENSDARG00000012397, ENSDARG00000117039 887 0.864 - 0.864 - - - - - - - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
51. vcl vcl 6667 0.856 - 0.856 - - - - - - -
52. obsl1b ENSDARG00000077388 2511 0.856 - 0.856 - - - - - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
53. foxc1b ENSDARG00000055398 1499 0.855 - 0.855 - - - - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
54. dpysl5b ENSDARG00000059311 600 0.854 - 0.854 - - - - - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
55. myhc4 ENSDARG00000035438 1322 0.852 - 0.852 - - - - - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
56. srl ENSDARG00000104587 11126 0.851 - 0.851 - - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
57. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 0.85 - 0.850 - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
58. CR392006.1 CR392006.1 1401 0.849 - 0.849 - - - - - - -
59. STXBP6 ENSDARG00000088862 988 0.848 - - - - - 0.848 - - - syntaxin binding protein 6 (amisyn) [Source:ZFIN;Acc:ZDB-GENE-040625-31]
60. UACA UACA 1218 0.846 - 0.846 - - - - - - -
61. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 0.844 - - - - - 0.844 - - - tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
62. tgm1l1 ENSDARG00000102106 1437 0.843 - 0.843 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
63. acsl1 acsl1 4216 0.842 - - - - - - 0.842 - -
64. jph1a ENSDARG00000058603 2852 0.842 - 0.842 - - - - - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
65. BX294434.1 ENSDARG00000061272 6493 0.84 - 0.840 - - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
66. CR388002.1 CR388002.1 1998 0.839 - 0.839 - - - - - - -
67. rabl5 rabl5 245 0.839 - 0.839 - - - - - - -
68. mef2cb ENSDARG00000009418 1124 0.838 - 0.838 - - - - - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
69. sptb ENSDARG00000030490 7128 0.837 - 0.837 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
70. srpk3 ENSDARG00000005916 1546 0.837 - 0.837 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
71. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 0.836 - 0.836 - - - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
72. slc43a1b ENSDARG00000037748 1406 0.835 - 0.835 - - - - - - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
73. ptk2.1 ptk2.1 766 0.835 - 0.835 - - - - - - -
74. vgll2b ENSDARG00000053773 444 0.835 - 0.835 - - - - - - - vestigial-like family member 2b [Source:ZFIN;Acc:ZDB-GENE-050809-113]
75. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 0.834 - 0.834 - - - - - - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
76. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 0.833 - 0.833 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
77. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 0.833 - 0.833 - - - - - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
78. actn3b ENSDARG00000001431 15747 0.833 - 0.833 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
79. si:dkey-246i21.1 197 0.833 - 0.833 - - - - - - - si:dkey-246i21.1, transcript variant X2
80. zcchc24 ENSDARG00000078026 1619 0.833 - 0.833 - - - - - - - zinc finger, CCHC domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-3573]
81. xirp2a ENSDARG00000071113 7113 0.832 - 0.832 - - - - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
82. CABZ01043311.1 CABZ01043311.1 475 0.832 - 0.832 - - - - - - -
83. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 0.831 - - - - - - - 0.831 - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
84. nmrk2 ENSDARG00000067848 10293 0.83 - 0.830 - - - - - - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
85. bbs7 ENSDARG00000059911 165 0.83 - - - - - - - 0.830 - Bardet-Biedl syndrome 7 [Source:ZFIN;Acc:ZDB-GENE-030219-90]
86. rab11fip4b ENSDARG00000103207, ENSDARG00000114706, ENSDARG00000116431 309 0.83 - 0.830 - - - - - - - RAB11 family interacting protein 4 (class II) b [Source:ZFIN;Acc:ZDB-GENE-080722-8]
87. mybphb ENSDARG00000003081 5208 0.828 - 0.828 - - - - - - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
88. hdac6 ENSDARG00000008384 144 0.827 - - - - - 0.827 - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
89. edn2 ENSDARG00000070578 276 0.827 - - - - - 0.827 - - - endothelin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-774]
90. sgcb ENSDARG00000052341 4168 0.827 - 0.827 - - - - - - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
91. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 0.827 - - - - - - 0.827 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
92. fam120c ENSDARG00000019205 1365 0.825 - 0.825 - - - - - - - family with sequence similarity 120C [Source:ZFIN;Acc:ZDB-GENE-090313-228]
93. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 0.824 - - - - - - - 0.824 - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
94. tnw 16679 0.824 - 0.824 - - - - - - - tenascin W, transcript variant X2
95. klhl38 klhl38 44 0.824 - - 0.824 - - - - - -
96. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 0.823 - - - - - - - 0.823 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
97. lox lox 7 0.821 - - - - - - - 0.821 -
98. nfkbiz ENSDARG00000102097 218 0.821 - - - - - - - 0.821 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta [Source:ZFIN;Acc:ZDB-GENE-071024-1]
99. smyd2b ENSDARG00000005629 8181 0.821 - 0.821 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
100. PCOLCE PCOLCE 25 0.821 - - - - - - - 0.821 -

There are 729 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA