Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL47

Gene Name Gene ID Reads Annotation
MRPL47 ENSGALG00000013759 9044 mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]











Genes with expression patterns similar to MRPL47

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPL47 ENSGALG00000013759 9044 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
2. RRP1B ENSGALG00000035696 12309 1.598 - - - - - - 0.832 0.766 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
3. RFC1 ENSGALG00000014298 6516 1.59 - - - - - - 0.787 0.803 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
4. FGFR1OP2 ENSGALG00000014084 1881 1.575 - - - - 0.772 - 0.803 - - - FGFR1 oncogene partner 2 [Source:NCBI gene;Acc:418214]
5. PPP1CC ENSGALG00000004571 14748 1.569 - - - - 0.770 - 0.799 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
6. PTPMT1 ENSGALG00000008091 6160 1.567 - - - - - - 0.752 0.815 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
7. BPNT1 ENSGALG00000009576 7445 1.558 - - - - - - 0.727 0.831 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
8. TRAPPC6B ENSGALG00000010157 7567 1.556 - - - - - - 0.833 0.723 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
9. NDUFA12 ENSGALG00000011325 19807 1.556 - - - - - - 0.856 0.700 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
10. SNX7 ENSGALG00000005478 4736 1.552 - - - - - - 0.754 0.798 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
11. HOXA5 ENSGALG00000025929 6231 1.547 - - - - - - 0.818 0.729 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
12. CCNC ENSGALG00000015471 6497 1.544 - - - - - - 0.804 0.740 - - cyclin C [Source:NCBI gene;Acc:421791]
13. TM4SF18 4553 1.541 - - - - - - 0.740 0.801 - - transmembrane 4 L six family member 18, transcript variant X2
14. CTSL2 CTSL2 7966 1.54 - - - - - - 0.801 0.739 - -
15. CWC27 ENSGALG00000014747 8389 1.536 - - - - - - 0.828 0.708 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
16. CCNH ENSGALG00000015641 8051 1.536 - - - - - - 0.813 0.723 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
17. COBRA1 COBRA1 4600 1.536 - - - - - - 0.753 0.783 - -
18. DAD1 ENSGALG00000035626 32604 1.534 - - - - - - 0.752 0.782 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
19. SCFD1 ENSGALG00000009916 5756 1.531 - - - - 0.766 - - 0.765 - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
20. FAM63B 3793 1.53 - - - - - - 0.819 0.711 - - family with sequence similarity 63 member B
21. CENPK ENSGALG00000014753 12414 1.529 - - - - - - 0.727 0.802 - - centromere protein K [Source:NCBI gene;Acc:427162]
22. FAM18B1 ENSGALG00000001335 5177 1.527 - - - - - - 0.776 0.751 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
23. BLMH ENSGALG00000004259 36907 1.52 - - - - - - 0.720 0.800 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
24. KLHL21 ENSGALG00000035211 6145 1.52 - - - - - - 0.742 0.778 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
25. RFC5 ENSGALG00000026517 26113 1.515 - - - - 0.744 - 0.771 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
26. MRPS22 ENSGALG00000005367 8307 1.512 - - - - 0.750 - - 0.762 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
27. HMGB3 ENSGALG00000009071 12011 1.509 - - - - - - 0.781 0.728 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
28. YRDC ENSGALG00000029001 6529 1.505 - - - - - - 0.753 0.752 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
29. FANCL ENSGALG00000030022 7423 1.5 - - - - - - 0.742 0.758 - - FA complementation group L [Source:NCBI gene;Acc:421202]
30. ADRM1 ENSGALG00000005200 5417 1.495 - - - - - - 0.793 0.702 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
31. SETD3 ENSGALG00000034802 4125 1.495 - - - - - - 0.791 0.704 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
32. KTN1 ENSGALG00000012137 4058 1.493 - - - - - - 0.759 0.734 - - kinectin 1 [Source:NCBI gene;Acc:396335]
33. NAA20 ENSGALG00000012587 11349 1.493 - - - - - - 0.725 0.768 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
34. RPA3 ENSGALG00000010700 6212 1.492 - - - - 0.709 - 0.783 - - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
35. KDM3B ENSGALG00000007663 7189 1.492 - - - - - - 0.763 0.729 - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
36. WASF1 ENSGALG00000015066 5628 1.489 - - - - 0.708 - 0.781 - - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
37. PCNP ENSGALG00000015330 15750 1.486 - - - - 0.745 - 0.741 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
38. RHOG ENSGALG00000026995 4875 1.485 - - - - - - 0.706 0.779 - - ras homolog family member G [Source:HGNC Symbol;Acc:HGNC:672]
39. INCENP ENSGALG00000007537 16617 1.476 - - - - - - 0.766 0.710 - - inner centromere protein [Source:NCBI gene;Acc:396270]
40. AKT1 ENSGALG00000011620 4089 1.473 - - - - - - 0.707 0.766 - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
41. SASS6 ENSGALG00000005302 4029 1.468 - - - - - - 0.718 0.750 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
42. GNG12 ENSGALG00000026591 5817 1.466 - - - - 0.711 - 0.755 - - - G protein subunit gamma 12, transcript variant X21
43. TAF2 ENSGALG00000043193 6311 1.457 - - - - - - 0.756 0.701 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
44. XPO4 ENSGALG00000017132 2538 1.455 - - - - - - 0.727 0.728 - - exportin 4 [Source:NCBI gene;Acc:428081]
45. UQCRC1 ENSGALG00000005789 23201 1.443 - - - - 0.701 - 0.742 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
46. EXOSC9 ENSGALG00000011884 3403 1.44 - - - - - - 0.735 0.705 - - exosome component 9 [Source:NCBI gene;Acc:619530]
47. SF3B3 ENSGALG00000002531 19397 1.436 - - - - - - 0.706 0.730 - - splicing factor 3b subunit 3, transcript variant X2
48. CRIPT ENSGALG00000010014 4311 1.434 - - - - - - 0.721 0.713 - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
49. DNAJC25 ENSGALG00000015684 4554 1.434 - - - - - 0.715 - 0.719 - - DnaJ heat shock protein family (Hsp40) member C25
50. MIB1 ENSGALG00000014974 3583 1.429 - - - - - - 0.704 0.725 - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
51. ACER3 ENSGALG00000000755 5761 1.426 - - - - - - 0.712 0.714 - - alkaline ceramidase 3 [Source:HGNC Symbol;Acc:HGNC:16066]
52. CNI CNI 18453 1.423 - - - - - - 0.705 0.718 - -
53. MBIP ENSGALG00000010096 2476 1.413 - - - - - - 0.709 0.704 - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
54. PTTG1 17936 0.882 - - - - - - 0.882 - - - pituitary tumor-transforming 1, transcript variant X1
55. TFDP1 ENSGALG00000016823 17019 0.876 - - - - - - 0.876 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
56. R3HDM1 ENSGALG00000012246 6580 0.875 - - - - - - 0.875 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
57. SNRNP40 ENSGALG00000000615 32298 0.874 - - - - - - 0.874 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
58. SDHD ENSGALG00000007878 25129 0.873 - - - - - - 0.873 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
59. NOP58 ENSGALG00000008454 34630 0.872 - - - - - - 0.872 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
60. EGLN1 ENSGALG00000041422 11032 0.871 - - - - - - 0.871 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
61. SMC4 ENSGALG00000009553 15715 0.868 - - - - - - 0.868 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
62. ENSGALG00000017396 ENSGALG00000017396 9028 0.866 - - - - - - 0.866 - - -
63. HSPA4 ENSGALG00000040882 20966 0.865 - - - - - - 0.865 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
64. C11H16ORF80 C11H16ORF80 18673 0.863 - - - - - - 0.863 - - -
65. PREP ENSGALG00000015405 17050 0.862 - - - - - - 0.862 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
66. MADH2 MADH2 13017 0.862 - - - - - - 0.862 - - -
67. NUDT7 ENSGALG00000034395 7396 0.861 - - - - - - - 0.861 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
68. LAPTM4A ENSGALG00000016479 15973 0.86 - - - - - - 0.860 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
69. EIF4A2 ENSGALG00000008684 58507 0.86 - - - - - - 0.860 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
70. KIAA0020 KIAA0020 14353 0.86 - - - - - - 0.860 - - -
71. CSE1L ENSGALG00000004707 20653 0.859 - - - - - - 0.859 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
72. WBSCR22 6082 0.859 - - - - - - 0.859 - - - Williams-Beuren syndrome chromosome region 22
73. DERL1 ENSGALG00000033950 15074 0.858 - - - - - - 0.858 - - - derlin 1 [Source:NCBI gene;Acc:420350]
74. RSL1D1 ENSGALG00000033690 13638 0.858 - - - - - - 0.858 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
75. BIRC6 ENSGALG00000010541 7999 0.857 - - - - - - 0.857 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
76. MRPL39 ENSGALG00000015742 7025 0.856 - - - - - - 0.856 - - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
77. GMPPB ENSGALG00000002500 9454 0.855 - - - - - - 0.855 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
78. TFB2M ENSGALG00000010651 4374 0.855 - - - - - - 0.855 - - - transcription factor B2, mitochondrial
79. LMAN2 ENSGALG00000033232 11740 0.854 - - - - - - 0.854 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
80. BMS1 ENSGALG00000002624 8339 0.853 - - - - - - 0.853 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
81. KRR1 ENSGALG00000010227 11783 0.852 - - - - - - 0.852 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
82. TDP2 ENSGALG00000013637 6595 0.852 - - - - - - - 0.852 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
83. YWHAZ ENSGALG00000031387 84985 0.846 - - - - - - 0.846 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
84. LLPH ENSGALG00000019358 20976 0.846 - - - - - - 0.846 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
85. MRPL40 ENSGALG00000001587 20893 0.845 - - - - - - 0.845 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
86. EIF3B ENSGALG00000040999 49971 0.845 - - - - - - 0.845 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
87. UTP11L UTP11L 11927 0.845 - - - - - - 0.845 - - -
88. MRPL50 ENSGALG00000015543 11649 0.844 - - - - - - 0.844 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
89. PARP1 ENSGALG00000009228 39433 0.842 - - - - - - 0.842 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
90. OSTC ENSGALG00000010526 19422 0.842 - - - - - - 0.842 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
91. SNRNP27 ENSGALG00000013883 22212 0.84 - - - - - - 0.840 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
92. TMEM30A ENSGALG00000015904 8533 0.84 - - - - - - 0.840 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
93. GLRX3 ENSGALG00000010464 22578 0.84 - - - - - - 0.840 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
94. DKC1 ENSGALG00000005054 30350 0.84 - - - - - - 0.840 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
95. RABGGTB ENSGALG00000011388 11654 0.84 - - - - - - 0.840 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
96. WDR51B WDR51B 5757 0.839 - - - - - - 0.839 - - -
97. KDELR2 ENSGALG00000040793 29669 0.838 - - - - - - 0.838 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
98. RANBP1 ENSGALG00000002107 17715 0.838 - - - - - - 0.838 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
99. MED17 ENSGALG00000017218 5821 0.837 - - - - - - 0.837 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
100. NDUFC2 ENSGALG00000029172 26136 0.836 - - - - - - 0.836 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]

There are 803 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA