Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL42

Gene Name Gene ID Reads Annotation
MRPL42 ENSGALG00000011293 15145 mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:HGNC:14493]











Genes with expression patterns similar to MRPL42

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPL42 ENSGALG00000011293 15145 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:HGNC:14493]
2. YIPF1 5945 1.669 - - - - - - 0.760 0.909 - - Yip1 domain family member 1, transcript variant 4
3. RBM26 ENSGALG00000016910 13769 1.664 - - - - 0.844 - 0.820 - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
4. ZMAT2 ENSGALG00000041746 23601 1.64 - - - - 0.935 - 0.705 - - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
5. RNF113A ENSGALG00000000538 3985 1.63 - - - - 0.883 - 0.747 - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
6. BEND5 ENSGALG00000010505 3298 1.629 - - - - - - 0.736 0.893 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
7. ABCC1 ENSGALG00000006646 2596 1.625 - - - - 0.878 - 0.747 - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
8. MYEOV2 MYEOV2 5155 1.603 - - - - 0.884 - 0.719 - - -
9. EPB41L1 ENSGALG00000034171 3616 1.59 - - - - 0.877 - 0.713 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
10. TSPAN13 ENSGALG00000027240 8999 1.482 - - - - - - 0.725 0.757 - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
11. SNX12 ENSGALG00000005659 9503 0.971 - - - - 0.971 - - - - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
12. ACO1 ENSGALG00000002162 6645 0.968 - - - - 0.968 - - - - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
13. WBP11 ENSGALG00000011745 11182 0.961 - - - - 0.961 - - - - - WW domain binding protein 11, transcript variant X1
14. AZIN1 ENSGALG00000029295 11085 0.944 - - - - 0.944 - - - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
15. VHL ENSGALG00000028009 25009 0.936 - - - - 0.936 - - - - - von Hippel-Lindau tumor suppressor, transcript variant X1
16. KLHL18 ENSGALG00000005582 3053 0.923 - - - - - - - 0.923 - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
17. LCLAT1 ENSGALG00000009056 5207 0.914 - - - - 0.914 - - - - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
18. COX4I1 68632 0.911 - - - - 0.911 - - - - - cytochrome c oxidase subunit 4I1, transcript variant X1
19. BLCAP ENSGALG00000027126 12200 0.903 - - - - - - - 0.903 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
20. TMEM60 ENSGALG00000008330 6303 0.903 - - - - - - - 0.903 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
21. TEX10 ENSGALG00000013438 3121 0.903 - - - - - - - 0.903 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
22. ZCCHC10 ENSGALG00000036666 5148 0.903 - - - - - - - 0.903 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
23. NEO1 ENSGALG00000001774 10165 0.902 - - - - - - - 0.902 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
24. HPS4 ENSGALG00000005595 2217 0.902 - - - - - - - 0.902 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
25. PRDM6 ENSGALG00000005351 2078 0.901 - - - - - - - 0.901 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
26. DIMT1 ENSGALG00000020569 5150 0.901 - - - - - - - 0.901 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
27. SIRT6 ENSGALG00000001245 3716 0.901 - - - - - - - 0.901 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
28. SFXN1 ENSGALG00000033956 2713 0.901 - - - - - - - 0.901 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
29. MYO9A ENSGALG00000033618 4505 0.899 - - - - - - - 0.899 - - myosin IXA, transcript variant X10
30. DEPDC1B ENSGALG00000014729 5334 0.899 - - - - - - - 0.899 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
31. EDF1 ENSGALG00000038003 6757 0.899 - - - - - - - 0.899 - - endothelial differentiation related factor 1 [Source:NCBI gene;Acc:417286]
32. RAB20 ENSGALG00000016844 3250 0.899 - - - - - - - 0.899 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
33. PSMC5 ENSGALG00000000349 21346 0.899 - - - - - - - 0.899 - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
34. MTFR2 ENSGALG00000019967 4436 0.898 - - - - - - - 0.898 - - mitochondrial fission regulator 2, transcript variant X1
35. TSSC4 ENSGALG00000006530 10413 0.898 - - - - 0.898 - - - - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
36. PIGB ENSGALG00000037734 2193 0.898 - - - - - - - 0.898 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
37. ADAMTS6 ENSGALG00000014751 1293 0.897 - - - - - - - 0.897 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
38. AVENAII AVENAII 4552 0.897 - - - - - - - 0.897 - -
39. MIEN1 ENSGALG00000026328 3396 0.897 - - - - - - - 0.897 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
40. COPS8 ENSGALG00000033385 10166 0.897 - - - - - - - 0.897 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
41. FSBP 3152 0.897 - - - - - - - 0.897 - - fibrinogen silencer binding protein
42. KCNK2 ENSGALG00000009687 1552 0.897 - - - - - - - 0.897 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
43. ACBD3 ENSGALG00000009246 8405 0.897 - - - - - - - 0.897 - - acyl-CoA binding domain containing 3 [Source:NCBI gene;Acc:421317]
44. DCK ENSGALG00000028501 8675 0.896 - - - - - - - 0.896 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
45. ATP11B ENSGALG00000008839 3455 0.896 - - - - - - - 0.896 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
46. GNL2 ENSGALG00000001973 10148 0.896 - - - - - - - 0.896 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
47. CNPY3 ENSGALG00000028471 1413 0.896 - - - - - - - 0.896 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
48. NKIRAS2 ENSGALG00000028971 3414 0.896 - - - - - - - 0.896 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
49. FBXW11 ENSGALG00000002229 5805 0.896 - - - - - - - 0.896 - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
50. CDKAL1 ENSGALG00000012677 4733 0.895 - - - - - - - 0.895 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
51. TNNI1 ENSGALG00000000313 4069 0.895 - - - - - - - 0.895 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
52. RAD52 ENSGALG00000039171 6989 0.895 - - - - - - - 0.895 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
53. TMEM200C ENSGALG00000030210 1434 0.895 - - - - - - - 0.895 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
54. CCDC15 1759 0.895 - - - - - - - 0.895 - - coiled-coil domain containing 15
55. TMEM26 ENSGALG00000025862 2222 0.894 - - - - - - - 0.894 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
56. ENSGALG00000002852 ENSGALG00000002852 2687 0.894 - - - - - - - 0.894 - -
57. EFR3B ENSGALG00000016605 234 0.894 - - - - - - - 0.894 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
58. KIF1A ENSGALG00000006221 1989 0.894 - - - - - - - 0.894 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
59. SYNM ENSGALG00000007048 705 0.894 - - - - - - - 0.894 - - synemin [Source:NCBI gene;Acc:395599]
60. FAXDC2 ENSGALG00000003972 172 0.893 - - - - - - - 0.893 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
61. ENSGALG00000006278 ENSGALG00000006278 202 0.893 - - - - - - - 0.893 - -
62. IVD ENSGALG00000040267 5820 0.893 - - - - - - - 0.893 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
63. TTC37 ENSGALG00000014670 5715 0.893 - - - - - - - 0.893 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
64. CDK9 ENSGALG00000035576 3659 0.893 - - - - - - - 0.893 - - cyclin dependent kinase 9 [Source:NCBI gene;Acc:417226]
65. ARHGEF18 ENSGALG00000003572 224 0.893 - - - - - - - 0.893 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
66. MRPL32 ENSGALG00000037258 6861 0.893 - - - - - - - 0.893 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
67. RAC2 ENSGALG00000012456 987 0.892 - - - - - - - 0.892 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
68. ZNHIT3 ENSGALG00000026031 8652 0.892 - - - - - - - 0.892 - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
69. PTPN12 9302 0.891 - - - - - - 0.891 - - - protein tyrosine phosphatase, non-receptor type 12
70. SULF1 ENSGALG00000039553 5115 0.891 - - - - - - - 0.891 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
71. TSHZ3 ENSGALG00000004528 3964 0.89 - - - - - - - 0.890 - - teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:30700]
72. CCDC104 CCDC104 6584 0.889 - - - - - - - 0.889 - -
73. GATC ENSGALG00000007195 8610 0.888 - - - - - - - 0.888 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
74. STX2 ENSGALG00000002536 10438 0.888 - - - - - - - 0.888 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
75. RBM15B 5416 0.888 - - - - - - - 0.888 - - RNA binding motif protein 15B
76. PREP ENSGALG00000015405 17050 0.888 - - - - - - - 0.888 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
77. ACVR1 ENSGALG00000037301 6448 0.886 - - - - - - - 0.886 - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
78. ENSGALG00000004931 ENSGALG00000004931 2737 0.886 - - - - - - - 0.886 - -
79. ACVR2B ENSGALG00000006158 8692 0.886 - - - - - - - 0.886 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
80. DAB2 ENSGALG00000003803 6143 0.885 - - - - - - - 0.885 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
81. NDST2 ENSGALG00000005107 4224 0.884 - - - - 0.884 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
82. MRPL22 ENSGALG00000003919 2760 0.884 - - - - 0.884 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
83. WHSC1L1 4065 0.883 - - - - 0.883 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
84. gga-mir-6584 ENSGALG00000028834 1481 0.882 - - - - 0.882 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
85. GGT1 ENSGALG00000006565 690 0.882 - - - - - - - 0.882 - - gamma-glutamyltransferase 1, transcript variant X11
86. HTRA3 ENSGALG00000034673 512 0.881 - - - - 0.881 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
87. KIF3A ENSGALG00000006860 6209 0.88 - - - - - - - 0.880 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
88. PPAPDC1B PPAPDC1B 6698 0.88 - - - - 0.880 - - - - -
89. CCDC59 ENSGALG00000028648 9272 0.88 - - - - 0.880 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
90. OPTC ENSGALG00000003554 3698 0.88 - - - - 0.880 - - - - - opticin [Source:NCBI gene;Acc:395130]
91. SPEN ENSGALG00000036932 9688 0.88 - - - - - - - 0.880 - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
92. RAE1 ENSGALG00000007653 8930 0.879 - - - - 0.879 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
93. NOL6 ENSGALG00000030730 7191 0.879 - - - - 0.879 - - - - - nucleolar protein 6
94. PHKA1 ENSGALG00000004801 2510 0.879 - - - - 0.879 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
95. SPR ENSGALG00000000067 3456 0.879 - - - - - - - 0.879 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
96. AP5Z1 ENSGALG00000040528 4302 0.878 - - - - - - - 0.878 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
97. NDUFB4 ENSGALG00000027688 8951 0.878 - - - - - - - 0.878 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
98. C17H9ORF16 C17H9ORF16 7908 0.878 - - - - - - - 0.878 - -
99. TBC1D7 ENSGALG00000012731 4891 0.878 - - - - 0.878 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
100. MED1 ENSGALG00000001708 9556 0.878 - - - - 0.878 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]

There are 341 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA