Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL28

Gene Name Gene ID Reads Annotation
MRPL28 ENSGALG00000007473 19134 mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]











Genes with expression patterns similar to MRPL28

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPL28 ENSGALG00000007473 19134 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
2. SRP9 ENSGALG00000026009 12418 1.731 - - - - - - 0.764 0.967 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
3. WDR45B ENSGALG00000001563 5870 1.702 - - - - - - 0.730 0.972 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
4. TNRC6A ENSGALG00000006068 9166 1.686 - - - - - - 0.745 0.941 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
5. TCEA2 ENSGALG00000005976 9143 1.685 - - - - - - - 0.971 - 0.714 transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
6. UBE2J2 ENSGALG00000001848 6527 1.671 - - - - - - 0.700 0.971 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
7. GLRX3 ENSGALG00000010464 22578 1.583 - - - - - - 0.789 0.794 - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
8. ZNF451 ENSGALG00000016282 3380 1.563 - - - - - - 0.717 0.846 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
9. SNRNP40 ENSGALG00000000615 32298 1.562 - - - - - - 0.820 - - 0.742 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
10. PPFIBP1 ENSGALG00000014106 9864 1.555 - - - - - - 0.733 0.822 - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
11. CSK ENSGALG00000031270 11541 1.543 - - - - - - 0.739 0.804 - - C-terminal Src kinase [Source:NCBI gene;Acc:396396]
12. PSMD12 ENSGALG00000026225 17473 1.502 - - - - - - 0.777 0.725 - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
13. DYNLT1 ENSGALG00000019979 38176 1.482 - - - - - - 0.707 0.775 - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
14. HSPA4 ENSGALG00000040882 20966 1.438 - - - - - - 0.737 0.701 - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
15. TAF12 ENSGALG00000000991 8709 0.981 - - - - - - - 0.981 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
16. RABL5 RABL5 5264 0.979 - - - - - - - 0.979 - -
17. TARS ENSGALG00000003288 12702 0.979 - - - - - - - 0.979 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
18. ITCH ENSGALG00000040474 2646 0.976 - - - - - - - 0.976 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
19. VPS26A ENSGALG00000004174 9198 0.975 - - - - - - - 0.975 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
20. EMC1 ENSGALG00000003969 6876 0.973 - - - - - - - 0.973 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
21. POLDIP2 ENSGALG00000003211 11664 0.972 - - - - - - - 0.972 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
22. UBE2Q2 3861 0.971 - - - - - - - 0.971 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
23. POLR2C ENSGALG00000001168 10703 0.97 - - - - - - - 0.970 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
24. C2CD2 ENSGALG00000016148 2734 0.97 - - - - - - - 0.970 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
25. WDR82 ENSGALG00000025904 4783 0.97 - - - - - - - 0.970 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
26. CDC73 ENSGALG00000002469 4586 0.969 - - - - - - - 0.969 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
27. DLGAP4 ENSGALG00000001046 6872 0.969 - - - - - - - 0.969 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
28. FNTA ENSGALG00000015397 3741 0.969 - - - - - - - 0.969 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
29. CHST2 ENSGALG00000034507 6172 0.969 - - - - - - - 0.969 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
30. C1orf21 ENSGALG00000020922 4035 0.968 - - - - - - - 0.968 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
31. EXOSC1 ENSGALG00000039917 5259 0.967 - - - - - - - 0.967 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
32. SRPK2 ENSGALG00000008154 7385 0.967 - - - - - - - 0.967 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
33. FGD5 ENSGALG00000008546 4031 0.967 - - - - - - - 0.967 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
34. UTP23 ENSGALG00000032400 3601 0.967 - - - - - - - 0.967 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
35. AKR1B10L3 ENSGALG00000019284 5869 0.967 - - - - - - - 0.967 - - aldo-keto reductase family 1 member B10-like 3
36. C5orf63 C5orf63 3718 0.967 - - - - - - - 0.967 - -
37. FGD3 ENSGALG00000005237 4410 0.967 - - - - - - - 0.967 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
38. CABLES1 ENSGALG00000014998 1636 0.966 - - - - - - - 0.966 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
39. TLN2 2295 0.966 - - - - - - - 0.966 - - talin 2, transcript variant X5
40. MAP4K5 ENSGALG00000012321 3036 0.966 - - - - - - - 0.966 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
41. MRPL10 ENSGALG00000014387 12386 0.965 - - - - - - - 0.965 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
42. TYW3 ENSGALG00000032549 4869 0.965 - - - - - - - 0.965 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
43. HVCN1 ENSGALG00000004562 2550 0.965 - - - - - - - 0.965 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
44. ENSGALG00000005615 ENSGALG00000005615 4354 0.963 - - - - - - - 0.963 - -
45. TBCE ENSGALG00000013950 3076 0.963 - - - - - - - 0.963 - - tubulin folding cofactor E
46. LUC7L3 ENSGALG00000007386 11944 0.962 - - - - - - - 0.962 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
47. PAM16 9684 0.962 - - - - - - - 0.962 - - presequence translocase associated motor 16 homolog, transcript variant X2
48. GNB1L ENSGALG00000001925 1981 0.961 - - - - - - - 0.961 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
49. LIPA ENSGALG00000006378 4414 0.961 - - - - - - - 0.961 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
50. METTL6 ENSGALG00000040665 4467 0.961 - - - - - - - 0.961 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
51. AARSD1 ENSGALG00000002880 3068 0.961 - - - - - - - 0.961 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
52. SEMA3F ENSGALG00000029621 2079 0.96 - - - - - - - 0.960 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
53. CTSA ENSGALG00000006876 5380 0.96 - - - - - - - 0.960 - - cathepsin A [Source:NCBI gene;Acc:428163]
54. KPNA4 ENSGALG00000009549 3674 0.959 - - - - - - - 0.959 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
55. GNE ENSGALG00000015331 1577 0.959 - - - - - - - 0.959 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
56. CAPRIN2 1473 0.959 - - - - - - - 0.959 - - caprin family member 2, transcript variant X7
57. SETD2 ENSGALG00000042051 2981 0.959 - - - - - - - 0.959 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
58. SLX4 ENSGALG00000031841 1208 0.958 - - - - - - - 0.958 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
59. VASH1 ENSGALG00000043036 1235 0.958 - - - - - - - 0.958 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
60. PLA2G7 ENSGALG00000016713 2100 0.958 - - - - - - - 0.958 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
61. NR3C2 ENSGALG00000010035 603 0.958 - - - - - - - 0.958 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
62. HIP1R ENSGALG00000031511 1981 0.958 - - - - - - - 0.958 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
63. CXorf23 1582 0.957 - - - - - - - 0.957 - - chromosome X open reading frame 23, transcript variant X3
64. HIPK3 ENSGALG00000011695 6842 0.957 - - - - - - - 0.957 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
65. FTSJ2 FTSJ2 2951 0.956 - - - - - - - 0.956 - -
66. RASGEF1B 2014 0.956 - - - - - - - 0.956 - - RasGEF domain family member 1B, transcript variant X8
67. ENSGALG00000001591 ENSGALG00000001591 784 0.955 - - - - - - - 0.955 - -
68. WNK2 ENSGALG00000038850 4712 0.955 - - - - - - - 0.955 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
69. MBNL2 ENSGALG00000016890 3162 0.955 - - - - - - - 0.955 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
70. ASPM ENSGALG00000032398 12784 0.954 - - - - - - - 0.954 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
71. HMOX1 ENSGALG00000012550 1186 0.953 - - - - - - - 0.953 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
72. SLC26A8 ENSGALG00000040498 253 0.952 - - - - - - - 0.952 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
73. CPEB2 ENSGALG00000014516 1187 0.951 - - - - - - - 0.951 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
74. FPGT ENSGALG00000026958 788 0.95 - - - - - - - 0.950 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
75. NCS1 ENSGALG00000012710 1104 0.95 - - - - - - - 0.950 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
76. PHF20L1 ENSGALG00000033205 7598 0.95 - - - - - - - 0.950 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
77. LOC420160 ENSGALG00000004252 188 0.95 - - - - - - - 0.950 - - cathepsin L1-like, transcript variant X3
78. NKX-6.2 NKX-6.2 1370 0.95 - - - - - - - 0.950 - -
79. YTHDF3 ENSGALG00000039774 170 0.949 - - - - - - - 0.949 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
80. TOR1B TOR1B 197 0.949 - - - - - - - 0.949 - -
81. CAPN9 158 0.949 - - - - - - - 0.949 - - calpain 9
82. ENSGALG00000020092 ENSGALG00000020092 3067 0.948 - - - - - - - 0.948 - -
83. C10orf11 C10orf11 3087 0.945 - - - - - - - 0.945 - -
84. APPBP2 ENSGALG00000005314 6447 0.941 - - - - - - - 0.941 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
85. NPEPL1 ENSGALG00000007533 5908 0.94 - - - - - - - 0.940 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
86. MOB4 ENSGALG00000008128 10322 0.932 - - - - - - - 0.932 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
87. RALBP1 ENSGALG00000008405 13780 0.929 - - - - - - - 0.929 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
88. NPM3 ENSGALG00000032329 21138 0.918 - - - - - - - 0.918 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
89. PCDH1 ENSGALG00000002553 2938 0.918 - - - - - - - 0.918 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
90. RAP1A ENSGALG00000001476 5287 0.914 - - - - - - - 0.914 - - RAP1A, member of RAS oncogene family
91. THOC2 ENSGALG00000008507 9501 0.912 - - - - - - - 0.912 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
92. NID2 ENSGALG00000012394 6717 0.911 - - - - - - - 0.911 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
93. CCT8 ENSGALG00000015821 12161 0.907 - - - - - - - 0.907 - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
94. CLINT1 ENSGALG00000003702 11269 0.883 - - - - - - - 0.883 - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
95. RCN1 RCN1 11758 0.881 - - - - - - 0.881 - - -
96. ENSGALG00000000360 ENSGALG00000000360 15320 0.877 - - - - - - - 0.877 - -
97. SDF2L1 ENSGALG00000031982 6084 0.859 - - - - - - 0.859 - - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
98. COX16 ENSGALG00000020449 5959 0.859 - - - - - - - 0.859 - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
99. ARIH2 ENSGALG00000006956 3692 0.854 - - - - - - - 0.854 - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
100. HAT1 ENSGALG00000009525 24864 0.853 - - - - - - - 0.853 - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]

There are 410 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA