Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MRPL21

Gene Name Gene ID Reads Annotation
MRPL21 ENSDARG00000003846 3244 mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]










Genes with expression patterns similar to MRPL21

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MRPL21 ENSDARG00000003846 3244 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
2. nudt3a ENSDARG00000016256 2713 3.106 0.768 0.862 - - - - 0.753 0.723 - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
3. eif2s3 ENSDARG00000008292 17051 2.553 0.762 0.848 - - - - - - 0.943 eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
4. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 2.434 - 0.731 0.992 - - - - 0.711 - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
5. ipo7 ENSDARG00000035751 7095 2.416 - 0.756 0.915 - - - 0.745 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
6. fitm1 ENSDARG00000056464 1759 2.318 0.857 0.710 - - - - 0.751 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
7. CU633479.5 ENSDARG00000114818 1815 2.259 0.723 0.828 - - - - 0.708 - -
8. chrna1 ENSDARG00000009021 2931 2.248 0.779 0.734 - - - - 0.735 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
9. C13H10orf71 3489 2.238 0.758 0.753 - - - - 0.727 - - chromosome 13 C10orf71 homolog
10. hapln1a ENSDARG00000089769 12334 2.233 0.725 0.785 - - - - 0.723 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
11. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 2.225 0.720 0.723 - - - - 0.782 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
12. tbl3 ENSDARG00000052344 1530 2.216 0.718 0.765 - - - - 0.733 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
13. TMPO TMPO 3264 2.208 0.793 0.704 - - - - 0.711 - -
14. MYOT ENSDARG00000076312 1791 2.2 0.710 0.790 - - - - 0.700 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
15. eif3m ENSDARG00000013931 8117 2.194 0.723 0.736 - - - - 0.735 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
16. ATP5J_2 ATP5J_2 2381 2.144 0.733 0.710 - - - - 0.701 - -
17. txn2 ENSDARG00000034777 4071 2.141 0.711 0.722 - - - - 0.708 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
18. samm50 ENSDARG00000045814 4511 1.833 - 0.844 - - - - - - 0.989 SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
19. zgc:123105 ENSDARG00000003127 3061 1.818 - 0.825 - - - - - - 0.993 zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
20. ptcd3 ENSDARG00000103856 2107 1.796 - - 0.992 - - - 0.804 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
21. C3H19orf43 C3H19orf43 2961 1.795 - 0.804 0.991 - - - - - -
22. nmt1a ENSDARG00000052966 5918 1.793 - 0.846 0.947 - - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
23. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.766 - 0.789 - - - - - - 0.977 synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
24. pa2g4b ENSDARG00000070657 7999 1.764 - 0.812 0.952 - - - - - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
25. C22H19orf70 C22H19orf70 4393 1.758 - - - - - - 0.766 - 0.992
26. sdhb ENSDARG00000075768 5493 1.75 - - - - - - 0.756 - 0.994 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
27. pl10 pl10 10795 1.736 - 0.766 - - - - - - 0.970
28. lin7a ENSDARG00000013414 1589 1.733 0.739 - - - - - - - 0.994 lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
29. ATOX1 ENSDARG00000087693 4016 1.731 - - 0.982 - 0.749 - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
30. numb ENSDARG00000027279 2905 1.731 - - 0.990 - 0.741 - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
31. LPL_1 LPL_1 1150 1.727 - - 0.990 - 0.737 - - - -
32. psmd4a ENSDARG00000101295 1410 1.723 - - - - 0.728 - - - 0.995 proteasome 26S subunit, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]
33. ptpn21 ENSDARG00000062248 2010 1.722 - 0.729 - - - - - - 0.993 protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
34. efr3bb 1533 1.722 - 0.728 - - - - - - 0.994 EFR3 homolog Bb (S. cerevisiae), transcript variant X2
35. eif2s1b ENSDARG00000052178 11961 1.711 - - - - - - 0.760 - 0.951 eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
36. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.71 - - 0.992 - - - 0.718 - -
37. dtnba ENSDARG00000077694 5483 1.709 0.726 - - - - - - - 0.983 dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
38. coa5 ENSDARG00000094833 1988 1.706 - - 0.990 0.716 - - - - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
39. kif2c ENSDARG00000076228 2281 1.702 - - - - - 0.708 - - 0.994 kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
40. nolc1 ENSDARG00000024561 3457 1.697 - 0.703 - - - - - - 0.994 nucleolar and coiled-body phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6349]
41. fam96b 2255 1.697 - 0.702 - - - - - - 0.995 family with sequence similarity 96, member B
42. acap3a ENSDARG00000075990 9652 1.697 - - - - - - 0.712 - 0.985 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
43. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.692 0.772 - 0.920 - - - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
44. fkbp7 ENSDARG00000010962 2986 1.684 - - 0.977 - - - 0.707 - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
45. schip1 ENSDARG00000035175 3838 1.683 - - 0.981 - - - 0.702 - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
46. NDNF ENSDARG00000062936 7287 1.665 - - 0.890 - - - 0.775 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
47. ACVR2B 6615 1.664 - 0.750 0.914 - - - - - - activin A receptor, type IIB
48. g3bp1 ENSDARG00000017741 7622 1.658 - - 0.893 - - 0.765 - - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
49. C25H12orf73 C25H12orf73 2031 1.654 - 0.835 - - - - 0.819 - -
50. C1QBP ENSDARG00000039887 11186 1.648 0.781 - - - - - 0.867 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
51. timm9 ENSDARG00000043865 2456 1.645 0.814 0.831 - - - - - - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
52. cdv3 ENSDARG00000023028 12380 1.645 - - 0.919 - - - 0.726 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
53. pomp ENSDARG00000032296 4439 1.645 - 0.837 - - - - 0.808 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
54. rreb1b ENSDARG00000042652 2731 1.618 - 0.835 - - - - 0.783 - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
55. ywhaqa ENSDARG00000042539 7034 1.615 - - 0.886 - 0.729 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
56. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.609 0.774 - - - - - 0.835 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
57. uqcrc2a ENSDARG00000014794 3949 1.605 - 0.783 - - - - 0.822 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
58. cilp ENSDARG00000053362 1429 1.603 - 0.852 - - - - 0.751 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
59. homer3 homer3 1974 1.601 - 0.751 - - - - 0.850 - -
60. mrpl12 ENSDARG00000038768 5539 1.593 0.788 0.805 - - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
61. tjp1a ENSDARG00000077506 2658 1.59 - 0.816 - - - - 0.774 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
62. rpf2 ENSDARG00000043960 2719 1.586 - 0.781 - - - - 0.805 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
63. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.579 0.811 - - - - - 0.768 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
64. sms ENSDARG00000008155 1192 1.576 0.731 0.845 - - - - - - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
65. myog ENSDARG00000009438 2368 1.575 - 0.777 - - - - 0.798 - - myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265]
66. RB1CC1 ENSDARG00000076559 2771 1.574 - 0.810 - - - - - 0.764 - RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
67. fbxw5 ENSDARG00000099139 2802 1.573 0.818 - - - - - 0.755 - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
68. C10H21orf59 275 1.573 - 0.808 - - - - 0.765 - - c10h21orf59 homolog (H. sapiens)
69. bysl ENSDARG00000001057 2621 1.571 - 0.703 0.868 - - - - - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
70. cnbpb ENSDARG00000070922 14606 1.57 0.833 - - - - - 0.737 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
71. prkacaa ENSDARG00000100349 2711 1.567 - 0.801 - - 0.766 - - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
72. hmgb3b ENSDARG00000006408 3442 1.567 0.701 0.866 - - - - - - - high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]
73. r3hcc1l ENSDARG00000089243 1254 1.566 - 0.790 - - 0.776 - - - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
74. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.565 - 0.829 - - - - 0.736 - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
75. ptp4a3 ENSDARG00000039997 1964 1.561 0.791 - - - 0.770 - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
76. pak2b ENSDARG00000018476 4331 1.559 - 0.753 - - 0.806 - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
77. eif4e2 ENSDARG00000038585 2116 1.557 0.757 - - - - - 0.800 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
78. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.556 - 0.729 - - - - 0.827 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
79. she ENSDARG00000087956 941 1.554 - 0.824 - - - - 0.730 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
80. mrpl40 ENSDARG00000043554 2198 1.55 - 0.762 - - 0.788 - - - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
81. setd3 ENSDARG00000016513 1507 1.55 - 0.722 - - - - 0.828 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
82. ube2g1b ENSDARG00000069527 5376 1.548 0.709 0.839 - - - - - - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
83. fam13a ENSDARG00000075564 1905 1.546 - - - - 0.734 - 0.812 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
84. MYOM3 2720 1.546 0.712 0.834 - - - - - - - myomesin 3, transcript variant X2
85. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.545 - 0.765 - - - - 0.780 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
86. cct5 ENSDARG00000045399 11572 1.543 0.801 0.742 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
87. sgcd ENSDARG00000098573 4980 1.541 0.835 - - - - - 0.706 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
88. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.536 - 0.771 - - - - 0.765 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
89. vwde ENSDARG00000103443 5758 1.535 0.734 0.801 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
90. ngdn ENSDARG00000045372 782 1.534 - 0.740 - - - - 0.794 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
91. ndufab1b ENSDARG00000014915 12796 1.533 - 0.808 - - - - 0.725 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
92. apex1 ENSDARG00000045843 6345 1.533 0.709 0.824 - - - - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
93. ect2 ENSDARG00000007278 1193 1.532 - - - - 0.818 - 0.714 - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
94. casc4 ENSDARG00000074490 2019 1.529 - 0.789 - - 0.740 - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
95. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.528 - 0.801 - - - - 0.727 - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
96. RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 1.526 0.789 - - - - 0.737 - - - ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]
97. hfe2 4113 1.524 0.767 0.757 - - - - - - - hemochromatosis type 2
98. cct4 ENSDARG00000013475 23959 1.523 0.735 - 0.788 - - - - - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
99. mrpl9 ENSDARG00000063249 783 1.523 - 0.797 - 0.726 - - - - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
100. si:ch211-85n16.3 ENSDARG00000096346 1095 1.521 - 0.701 - - - - 0.820 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]

There are 1543 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA