Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL19

Gene Name Gene ID Reads Annotation
MRPL19 ENSGALG00000016731 22670 mitochondrial ribosomal protein L19, transcript variant X1











Genes with expression patterns similar to MRPL19

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRPL19 ENSGALG00000016731 22670 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L19, transcript variant X1
2. TRAM1 ENSGALG00000041112 22876 1.782 - - - - 0.868 - 0.914 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
3. SOD2 ENSGALG00000011661 13178 1.733 - - - - 0.844 - 0.889 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
4. LAP3 ENSGALG00000006334 21076 1.7 - - - - 0.820 - 0.880 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
5. DYNC1LI1 ENSGALG00000011491 11011 1.699 - - - - 0.846 - 0.853 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
6. ASPM ENSGALG00000032398 12784 1.682 - - - - 0.831 - - 0.851 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
7. PSMD12 ENSGALG00000026225 17473 1.673 - - - - 0.895 - - 0.778 - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
8. THOC2 ENSGALG00000008507 9501 1.644 - - - - - - 0.825 0.819 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
9. EIF4G3 ENSGALG00000010084 5881 1.635 - - - - 0.833 - 0.802 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
10. FGD3 ENSGALG00000005237 4410 1.624 - - - - - - 0.831 0.793 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
11. SPTBN1 ENSGALG00000029512 18579 1.623 - - - - - - 0.879 0.744 - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
12. MAP1LC3A ENSGALG00000038721 2230 1.621 - - - - 0.814 - 0.807 - - - microtubule associated protein 1 light chain 3 alpha
13. LTBP3 LTBP3 13316 1.609 - - - - - - 0.825 0.784 - -
14. MRPL20 ENSGALG00000001542 28764 1.583 - - 0.710 - 0.873 - - - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
15. HAT1 ENSGALG00000009525 24864 1.425 - - 0.703 - - - - 0.722 - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
16. MINOS1 ENSGALG00000004039 37740 0.963 - - - - - - 0.963 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
17. ADH5 ENSGALG00000012245 38217 0.947 - - - - - - 0.947 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
18. PSMC2 ENSGALG00000008236 25980 0.936 - - - - - - 0.936 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
19. TCP1 ENSGALG00000011637 73216 0.934 - - - - - - 0.934 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
20. NAA25 ENSGALG00000041821 12729 0.933 - - - - - - 0.933 - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
21. AIRC AIRC 15851 0.931 - - - - - - 0.931 - - -
22. MAGOH 28688 0.931 - - - - - - 0.931 - - - mago homolog, exon junction complex core component
23. MCM4 ENSGALG00000012915 13151 0.929 - - - - - - 0.929 - - - minichromosome maintenance complex component 4
24. ARL6IP5 ENSGALG00000038904 12956 0.927 - - - - - - 0.927 - - - ADP ribosylation factor like GTPase 6 interacting protein 5 [Source:NCBI gene;Acc:426074]
25. DNAJC15 ENSGALG00000016965 9163 0.926 - - - - - - 0.926 - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
26. VMP1 ENSGALG00000005160 12859 0.923 - - - - - - 0.923 - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
27. PTBP1 ENSGALG00000001962 66983 0.923 - - - - - - 0.923 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
28. CREPT CREPT 17142 0.92 - - - - - - 0.920 - - -
29. GCLM ENSGALG00000005782 15789 0.918 - - - - - - 0.918 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
30. SNORA72 SNORA72 27695 0.917 - - - - - - 0.917 - - -
31. CLPTM1L ENSGALG00000013187 9733 0.916 - - - - - - 0.916 - - - CLPTM1 like [Source:NCBI gene;Acc:420973]
32. ENSGALG00000007509 ENSGALG00000007509 18441 0.911 - - - - - - 0.911 - - -
33. FUNDC1 ENSGALG00000028187 10511 0.91 - - - - - - 0.910 - - - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
34. UBR7 ENSGALG00000010842 16488 0.908 - - - - - - 0.908 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
35. FAM96B 14435 0.907 - - - - - - 0.907 - - - family with sequence similarity 96 member B
36. KIF20A ENSGALG00000035030 10249 0.906 - - - - - - 0.906 - - - kinesin family member 20A [Source:NCBI gene;Acc:416220]
37. COX7A2L ENSGALG00000037996 13646 0.905 - - - - - - 0.905 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
38. ACAA2 ENSGALG00000031142 29220 0.904 - - - - - - 0.904 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
39. NARS ENSGALG00000040506 9506 0.901 - - - - - - 0.901 - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
40. NDUFB10 ENSGALG00000005465 41984 0.901 - - - - - - 0.901 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
41. ARPC4 ENSGALG00000006691 33311 0.899 - - - - - - 0.899 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
42. SNRPF ENSGALG00000011409 23557 0.898 - - - - - - 0.898 - - - small nuclear ribonucleoprotein polypeptide F [Source:NCBI gene;Acc:417916]
43. NRD1 NRD1 10827 0.898 - - - - - - 0.898 - - -
44. MGST1 ENSGALG00000013098 17632 0.897 - - - - - - 0.897 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
45. GABPA ENSGALG00000015763 11567 0.895 - - - - - - 0.895 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
46. KIF15 ENSGALG00000036645 9946 0.895 - - - - - - 0.895 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
47. BUB1 ENSGALG00000008233 11536 0.895 - - - - 0.895 - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
48. RANBP1 ENSGALG00000002107 17715 0.894 - - - - 0.894 - - - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
49. NDUFS6 ENSGALG00000013191 15874 0.893 - - - - - - 0.893 - - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
50. UTP3 ENSGALG00000011553 8814 0.893 - - - - - - 0.893 - - - UTP3, small subunit processome component homolog (S. cerevisiae)
51. PSMA6 ENSGALG00000010060 26517 0.891 - - - - - - 0.891 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
52. XPA ENSGALG00000028998 8621 0.891 - - - - - - 0.891 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
53. VPS29 ENSGALG00000004529 22509 0.889 - - - - 0.889 - - - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
54. PEPD ENSGALG00000004899 9785 0.888 - - - - - - 0.888 - - - peptidase D [Source:NCBI gene;Acc:415776]
55. COPE ENSGALG00000003153 19444 0.885 - - - - - - 0.885 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
56. PSMB3 ENSGALG00000001597 22588 0.884 - - - - - - 0.884 - - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
57. TM9SF3 ENSGALG00000005534 15290 0.884 - - - - - - 0.884 - - - transmembrane 9 superfamily member 3
58. CLTA ENSGALG00000015326 26867 0.884 - - - - - - 0.884 - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
59. NDUFA9 ENSGALG00000017282 14358 0.882 - - - - - - 0.882 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
60. CCDC58 ENSGALG00000014413 9022 0.882 - - - - - - 0.882 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
61. C5H14ORF166 C5H14ORF166 24176 0.881 - - - - 0.881 - - - - -
62. NCOA4 ENSGALG00000002066 10544 0.881 - - - - - - 0.881 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
63. TP53BP2 ENSGALG00000042816 12368 0.881 - - - - - - 0.881 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
64. MRPL44 ENSGALG00000003067 15256 0.881 - - - - - - 0.881 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
65. PMM2 ENSGALG00000007326 8260 0.881 - - - - - - 0.881 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
66. ATRX ENSGALG00000007843 34172 0.88 - - - - - - 0.880 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
67. COPS4 ENSGALG00000011130 21515 0.88 - - - - - - 0.880 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
68. EIF3M ENSGALG00000012109 38661 0.88 - - - - - - 0.880 - - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
69. ALDH4A1 ENSGALG00000042184 9432 0.878 - - - - - - 0.878 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
70. SF3A3 ENSGALG00000001540 9664 0.878 - - - - - - 0.878 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
71. SFT2D1 ENSGALG00000020005 10855 0.877 - - - - - - 0.877 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
72. BCCIP ENSGALG00000006617 13291 0.877 - - - - 0.877 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
73. GFM1 ENSGALG00000009634 7213 0.874 - - - - - - 0.874 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
74. CLINT1 ENSGALG00000003702 11269 0.873 - - - - - - - 0.873 - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
75. GOLGA7 ENSGALG00000003483 26525 0.872 - - - - 0.872 - - - - - golgin A7 [Source:NCBI gene;Acc:426787]
76. PSMG3 ENSGALG00000004203 11240 0.872 - - - - - - 0.872 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
77. LARP1 ENSGALG00000040109 14808 0.871 - - - - - - 0.871 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
78. CKAP5 ENSGALG00000008325 8494 0.871 - - - - 0.871 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
79. SDF4 ENSGALG00000001872 6382 0.87 - - - - - - 0.870 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
80. ACTR6 ENSGALG00000040976 31271 0.869 - - - - 0.869 - - - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
81. HADH ENSGALG00000016124 18216 0.868 - - - - - - 0.868 - - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
82. GPX1 ENSGALG00000028204 62935 0.868 - - - - - - 0.868 - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
83. CISD2 ENSGALG00000027860 12968 0.867 - - - - 0.867 - - - - - CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]
84. POR ENSGALG00000002053 5223 0.866 - - - - - - 0.866 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
85. HNRNPLL ENSGALG00000008504 14719 0.866 - - - - 0.866 - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
86. RPA1 ENSGALG00000003072 8023 0.866 - - - - - - 0.866 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
87. BTAF1 ENSGALG00000030598 3556 0.866 - - - - - - 0.866 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
88. SUGT1 ENSGALG00000016946 22881 0.864 - - - - 0.864 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
89. STK4 ENSGALG00000004098 11366 0.864 - - - - - - 0.864 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
90. MPPED1 ENSGALG00000014186 5726 0.864 - - - - 0.864 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
91. FOXK2 ENSGALG00000001577 6346 0.864 - - - - 0.864 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
92. PEBP1 ENSGALG00000007403 77502 0.863 - - - - - - 0.863 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
93. FASTKD2 ENSGALG00000008529 7439 0.863 - - - - - - 0.863 - - - FAST kinase domains 2 [Source:HGNC Symbol;Acc:HGNC:29160]
94. UBA3 ENSGALG00000013410 6923 0.862 - - - - - - 0.862 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
95. MRPS11 ENSGALG00000006777 16009 0.862 - - - - - - 0.862 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
96. ZNF217 ZNF217 14511 0.862 - - - - 0.862 - - - - -
97. BPTF ENSGALG00000038222 7521 0.862 - - - - - - 0.862 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
98. MRE11A MRE11A 5754 0.859 - - - - - - 0.859 - - -
99. SRSF6 ENSGALG00000000990 12424 0.859 - - - - 0.859 - - - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
100. WBP11 ENSGALG00000011745 11182 0.859 - - - - - - 0.859 - - - WW domain binding protein 11, transcript variant X1

There are 316 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA