Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRPL18

Gene Name Gene ID Reads Annotation
MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]










Genes with expression patterns similar to MRPL18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
2. uck2b ENSDARG00000022213 1542 1.75 0.855 0.895 - - - - - - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
3. OTTDARG00000032278 OTTDARG00000032278 1016 1.717 0.880 0.837 - - - - - - -
4. COL4A3BP COL4A3BP 3288 1.681 0.836 0.845 - - - - - - -
5. ppp1r14bb ENSDARG00000030161 2349 1.672 0.821 0.851 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
6. crcp ENSDARG00000069373 730 1.657 - 0.780 - - - 0.877 - - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
7. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.648 0.892 - - - - - 0.756 - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
8. PRSS23 ENSDARG00000055786 564 1.644 0.873 0.771 - - - - - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
9. PLEKHH3 ENSDARG00000070174 2117 1.638 0.931 0.707 - - - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
10. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.638 0.875 - - - - - 0.763 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
11. itgb1bp1 ENSDARG00000007169 2723 1.622 0.906 - - - - 0.716 - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
12. wwp2 ENSDARG00000061345 3459 1.614 0.742 0.872 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
13. ddx49 ENSDARG00000012899 1604 1.609 0.860 - - - - 0.749 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
14. mrpl32 ENSDARG00000060489 2728 1.606 0.779 - - - - 0.827 - - - mitochondrial ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060825-188]
15. immt ENSDARG00000102874 3435 1.599 - 0.892 - - - - 0.707 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
16. dlgap4a ENSDARG00000060849 1813 1.591 0.857 0.734 - - - - - - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
17. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.584 0.707 0.877 - - - - - - - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
18. PRKAB2 2489 1.581 - 0.838 - - - 0.743 - - - protein kinase, AMP-activated, beta 2 non-catalytic subunit
19. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.567 - 0.804 - - - - 0.763 - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
20. wu:fb12e11 wu:fb12e11 2332 1.564 0.783 - - - - 0.781 - - -
21. myof ENSDARG00000006112 618 1.559 0.803 0.756 - - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
22. fam3a ENSDARG00000070675, ENSDARG00000115910 1377 1.553 0.738 0.815 - - - - - - - family with sequence similarity 3, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1772]
23. zgc:136892 ENSDARG00000069505 365 1.549 0.739 0.810 - - - - - - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
24. ahsa1 ahsa1 2012 1.545 - 0.813 - - - 0.732 - - -
25. prkg1a ENSDARG00000020656 918 1.542 - 0.817 - - - 0.725 - - - protein kinase cGMP-dependent 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1308]
26. BX248510.1 ENSDARG00000075422 1449 1.539 - - - - - 0.801 0.738 - - mitochondrial ribosomal protein L49 [Source:NCBI gene;Acc:558658]
27. ndufs6 ENSDARG00000056583 7220 1.537 - - - - - 0.774 0.763 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
28. nob1 ENSDARG00000016080 2483 1.536 0.833 - - - - 0.703 - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
29. MRPL55 MRPL55 1711 1.533 - - - - - 0.776 0.757 - -
30. timm9 ENSDARG00000043865 2456 1.521 - - - - - 0.817 0.704 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
31. cox7c ENSDARG00000104537 12169 1.52 - - - - - 0.758 0.762 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
32. slc30a9 ENSDARG00000057272 766 1.511 - 0.781 - - - 0.730 - - - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
33. hadhab ENSDARG00000060594 3664 1.506 - - - - - 0.723 0.783 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
34. rp42-pen rp42-pen 3395 1.504 0.788 - - - - - 0.716 - -
35. bccip ENSDARG00000004948 593 1.503 - 0.797 - 0.706 - - - - - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
36. hspa14 ENSDARG00000058030, ENSDARG00000112257, ENSDARG00000114313 1614 1.498 0.757 - - - - 0.741 - - - heat shock protein 14 [Source:ZFIN;Acc:ZDB-GENE-041210-73]
37. nid1a ENSDARG00000068710 3948 1.497 - - - - - 0.769 0.728 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
38. fkbp10b ENSDARG00000045129 3525 1.487 - 0.716 - - - - 0.771 - - FK506 binding protein 10b [Source:ZFIN;Acc:ZDB-GENE-030131-3101]
39. uqcrfs1_1 ENSDARG00000007745 2687 1.475 - - - - - 0.769 0.706 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
40. atp5o 10343 1.464 - - - - - 0.707 0.757 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
41. psmb2 ENSDARG00000031511 4016 1.45 - 0.718 - - - 0.732 - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
42. cilp ENSDARG00000053362 1429 1.448 - - - - - 0.736 0.712 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
43. hadhaa ENSDARG00000057128 2179 1.448 - - - - - 0.738 0.710 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
44. cyc1 ENSDARG00000038075 16699 1.445 - - - - - 0.738 0.707 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
45. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.436 - - - - - 0.730 0.706 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
46. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.431 - - - - - 0.712 0.719 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
47. AEBP1 ENSDARG00000091726 1431 1.43 - - - - - 0.710 0.720 - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
48. nnt ENSDARG00000023536 7357 1.429 - - - - - 0.716 0.713 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
49. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.424 - - - - - 0.703 0.721 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
50. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.419 - - - - - 0.703 0.716 - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
51. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.411 - 0.704 - - - 0.707 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
52. BOLA3 ENSDARG00000098130 1340 0.921 - 0.921 - - - - - - - bolA family member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-32]
53. smim8 ENSDARG00000071040 622 0.92 0.920 - - - - - - - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
54. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 0.918 - 0.918 - - - - - - - reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
55. psmg1 ENSDARG00000040620 1359 0.918 0.918 - - - - - - - - proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]
56. cdh11 ENSDARG00000021442 1601 0.917 - 0.917 - - - - - - - cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]
57. vrk1 ENSDARG00000018006 1759 0.913 0.913 - - - - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
58. arfrp1 ENSDARG00000057857 2840 0.913 0.913 - - - - - - - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
59. dgcr6 ENSDARG00000005500 479 0.912 0.912 - - - - - - - - DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
60. znf503 ENSDARG00000018492 5974 0.912 0.912 - - - - - - - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
61. aff2 ENSDARG00000052242 540 0.908 0.908 - - - - - - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
62. gab1 ENSDARG00000037018 1489 0.905 0.905 - - - - - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
63. pcnp ENSDARG00000037713 2754 0.905 - 0.905 - - - - - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
64. tpst1l ENSDARG00000044513 1339 0.905 0.905 - - - - - - - - tyrosylprotein sulfotransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040316-1]
65. lum ENSDARG00000045580 5395 0.905 0.905 - - - - - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
66. mafba ENSDARG00000017121 1215 0.904 0.904 - - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
67. si:ch211-209a2.1 250 0.903 0.903 - - - - - - - - si:ch211-209a2.1, transcript variant X2
68. stm ENSDARG00000035694 1567 0.902 0.902 - - - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
69. gna11a ENSDARG00000010002, ENSDARG00000111208 1303 0.902 0.902 - - - - - - - - guanine nucleotide binding protein (G protein), alpha 11a (Gq class) [Source:ZFIN;Acc:ZDB-GENE-050208-597]
70. clpp ENSDARG00000020679 2125 0.902 0.902 - - - - - - - - caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
71. map3k7 ENSDARG00000020469 2845 0.902 - 0.902 - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
72. kpnb3 ENSDARG00000040245 7967 0.902 0.902 - - - - - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
73. itgb4 ENSDARG00000028507 2568 0.901 0.901 - - - - - - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
74. tusc2a ENSDARG00000099817 560 0.901 0.901 - - - - - - - - tumor suppressor 2, mitochondrial calcium regulator a [Source:ZFIN;Acc:ZDB-GENE-061013-612]
75. ddrgk1_1 ENSDARG00000037172 1563 0.9 0.900 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
76. CHORDC1 CHORDC1 544 0.9 - 0.900 - - - - - - -
77. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 0.899 0.899 - - - - - - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
78. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.898 0.898 - - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
79. wdr91 ENSDARG00000015153 388 0.898 0.898 - - - - - - - - WD repeat domain 91 [Source:ZFIN;Acc:ZDB-GENE-050113-2]
80. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 0.896 0.896 - - - - - - - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
81. TMEM14A ENSDARG00000095157 611 0.896 0.896 - - - - - - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
82. nol9 ENSDARG00000077751 2471 0.896 - 0.896 - - - - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
83. me3 ENSDARG00000002305 3305 0.896 0.896 - - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
84. usp14 ENSDARG00000025889 2701 0.896 - 0.896 - - - - - - - ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) [Source:ZFIN;Acc:ZDB-GENE-030131-7676]
85. rbm25 rbm25 3629 0.895 0.895 - - - - - - - -
86. BX511263.1_1 BX511263.1_1 368 0.895 0.895 - - - - - - - -
87. si:ch211-218g4.2 ENSDARG00000078145 778 0.894 - 0.894 - - - - - - - si:ch211-218g4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-60]
88. TMTC2 TMTC2 478 0.893 0.893 - - - - - - - -
89. tmem180 tmem180 430 0.893 0.893 - - - - - - - -
90. asb6 ENSDARG00000007125 389 0.892 0.892 - - - - - - - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
91. sft2d3 ENSDARG00000070284 351 0.892 0.892 - - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
92. myo1ea ENSDARG00000036179 891 0.892 0.892 - - - - - - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
93. nle1 ENSDARG00000057105 522 0.892 0.892 - - - - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
94. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 0.891 0.891 - - - - - - - - ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
95. CABZ01020207.1 CABZ01020207.1 145 0.891 0.891 - - - - - - - -
96. fzd7b ENSDARG00000027589 2562 0.891 0.891 - - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
97. pho ENSDARG00000035133 670 0.89 0.890 - - - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
98. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 0.89 0.890 - - - - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
99. GATAD2B ENSDARG00000005834 3855 0.889 0.889 - - - - - - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
100. tvp23b ENSDARG00000057060 361 0.888 0.888 - - - - - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]

There are 1140 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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