Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MMP9

Gene Name Gene ID Reads Annotation
MMP9 ENSGALG00000006992 78 matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]











Genes with expression patterns similar to MMP9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMP9 ENSGALG00000006992 78 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
2. CLDN16 ENSGALG00000025821 14 2 - - - - - 1.000 - 1.000 - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
3. TMEM114 ENSGALG00000039005 13 1.814 - - - - - 0.921 - 0.893 - - transmembrane protein 114 [Source:HGNC Symbol;Acc:HGNC:33227]
4. ENSGALG00000023638 ENSGALG00000023638 16 1.756 - - - - - 1.000 - 0.756 - -
5. PSMD4 ENSGALG00000028505 16 1.714 - - 0.972 - - - 0.742 - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
6. CLIC3 ENSGALG00000038789 233 1.678 - - 0.866 - - - - 0.812 - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
7. CDK7 ENSGALG00000014790 148 1.546 - - - - - - 0.824 0.722 - - cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]
8. MC5R ENSGALG00000032087 2 1 - - - - - - 1.000 - - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
9. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
10. Mar-04 Mar-04 7 1 - - - - - - 1.000 - - -
11. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
12. HAAO ENSGALG00000009926 6 1 - - - - - - - 1.000 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
13. TMEM207 ENSGALG00000026953 7 1 - - - - - - - 1.000 - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
14. LRFN2 ENSGALG00000010050 28 1 - - - - - - 1.000 - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
15. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
16. PKN2 ENSGALG00000006237 37 1 - - - - - - 1.000 - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
17. NOG ENSGALG00000003114 12 1 - - - - - - 1.000 - - - noggin [Source:NCBI gene;Acc:373912]
18. ABI3BP ENSGALG00000015307 4 1 - - - - - - - 1.000 - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
19. BCMO1 BCMO1 35 1 - - - - - - 1.000 - - -
20. CCL5 ENSGALG00000043603 10 1 - - - - - - 1.000 - - - chemokine (C-C motif) ligand 5 [Source:NCBI gene;Acc:417465]
21. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
22. TEKT5 ENSGALG00000007257 5 1 - - - - - - - 1.000 - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
23. K123 ENSGALG00000041978 16 1 - - - - - - 1.000 - - - K123 protein [Source:NCBI gene;Acc:395873]
24. TNN ENSGALG00000004538 21 1 - - - - - - 1.000 - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
25. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
26. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
27. OBSL1 ENSGALG00000011242 22 1 - - - - - - 1.000 - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
28. HBEGF ENSGALG00000000949 15 1 - - - - - - - 1.000 - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
29. JDP2 ENSGALG00000010322 11 1 - - - - - - 1.000 - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
30. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
31. CSMD3 ENSGALG00000031578 23 1 - - - - - - 1.000 - - - CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
32. PCYT1B 190 1 - - - - - - 1.000 - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
33. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
34. TMTC1 ENSGALG00000012956 160 1 - - - - - - 1.000 - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
35. CMBL ENSGALG00000013033 3 1 - - - - - - 1.000 - - - carboxymethylenebutenolidase homolog, transcript variant X4
36. NDEL1 ENSGALG00000001163 16 1 - - - - - - 1.000 - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
37. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
38. LPAR5 ENSGALG00000014455 10 1 - - - - - - 1.000 - - - lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
39. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
40. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
41. CLRN2 ENSGALG00000027453 3 1 - - - - - - 1.000 - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
42. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
43. UBAP1 ENSGALG00000021378 11 1 - - - - - - 1.000 - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
44. RCOR1 ENSGALG00000011384 22 1 - - - - - - 1.000 - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
45. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
46. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
47. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
48. TIMP2 ENSGALG00000027070 33 1 - - - - - - 1.000 - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
49. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
50. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
51. ZHX1 ENSGALG00000034999 21 1 - - - - - - 1.000 - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
52. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
53. ENSGALG00000026637 ENSGALG00000026637 12 1 - - - - - - 1.000 - - -
54. AJAP1 ENSGALG00000027265 11 1 - - - - - - 1.000 - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
55. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
56. SESN3 ENSGALG00000017204 7 1 - - - - - - 1.000 - - - sestrin 3, transcript variant X2
57. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
58. CNDP1 ENSGALG00000013697 7 1 - - - - - - 1.000 - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
59. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
60. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
61. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
62. SUFU ENSGALG00000008096 307 1 - - - - - - 1.000 - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
63. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
64. SNX13 ENSGALG00000010840 13 1 - - - - - - 1.000 - - - sorting nexin 13 [Source:NCBI gene;Acc:420598]
65. GLRA4 ENSGALG00000004936 23 1 - - - - - - 1.000 - - - glycine receptor alpha 4 [Source:HGNC Symbol;Acc:HGNC:31715]
66. ROS1 ENSGALG00000014913 7 1 - - - - - - 1.000 - - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
67. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
68. FABP1 ENSGALG00000015937 12 1 - - - - - - - 1.000 - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
69. LRRC9 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 9
70. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - 1.000 - - -
71. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
72. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
73. ASPR ASPR 1 1 - - - - - 1.000 - - - -
74. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
75. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
76. RAB43 ENSGALG00000005021 5 1 - - - - - 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
77. ARHGDIG ENSGALG00000036819 18 1 - - - - - - 1.000 - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
78. TEX33 ENSGALG00000012490 11 1 - - - - - 1.000 - - - - testis expressed 33, transcript variant X2
79. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
80. RS1 ENSGALG00000016523 11 1 - - - - - - - 1.000 - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
81. CASS4 ENSGALG00000007744 10 1 - - - - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
82. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
83. FAM208B 24 1 - - - - - - 1.000 - - - family with sequence similarity 208 member B, transcript variant X3
84. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
85. STARD10 ENSGALG00000002577 245 1 - - - - - - 1.000 - - - StAR related lipid transfer domain containing 10
86. FZD10 ENSGALG00000042003 11 1 - - - - - - 1.000 - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
87. SORCS2 ENSGALG00000015554 7 1 - - - - - - 1.000 - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
88. QSOX1 ENSGALG00000003933 184 1 - - - - - 1.000 - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
89. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
90. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
91. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
92. TNFRSF8 ENSGALG00000039741 6 1 - - - - - - - 1.000 - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
93. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
94. CA8 ENSGALG00000039145 109 1 - - - - - - 1.000 - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
95. CHAT ENSGALG00000002289 26 1 - - - - - 1.000 - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
96. FAT2 ENSGALG00000004320 4 1 - - - - - 1.000 - - - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
97. TNFRSF9 9 1 - - - - - - 1.000 - - - tumor necrosis factor receptor superfamily member 9
98. ENSGALG00000027169 ENSGALG00000027169 2 1 - - - - - - 1.000 - - -
99. GAB3 ENSGALG00000008408 19 1 - - - - - - 1.000 - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
100. C1orf168 C1orf168 98 1 - - - - - - 1.000 - - -

There are 337 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA