Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MMP23B

Gene Name Gene ID Reads Annotation
MMP23B ENSGALG00000001392 53 matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]











Genes with expression patterns similar to MMP23B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMP23B ENSGALG00000001392 53 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
2. TMEM170B ENSGALG00000012744 24 1.858 - - - - - - 1.000 - - 0.858 transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
3. ZC2HC1A ENSGALG00000035932 17 1.841 - - - - - 0.841 1.000 - - - zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
4. TNPO1 ENSGALG00000015014 57 1.828 - - 0.901 - 0.927 - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
5. HAAO ENSGALG00000009926 6 1.812 - - - - - - 0.824 - - 0.988 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
6. POMGNT2 ENSGALG00000011518 36 1.728 - - 0.875 - 0.853 - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
7. DRD4 ENSGALG00000040761 79 1.661 - - - - 0.842 - - - - 0.819 dopamine receptor D4 [Source:NCBI gene;Acc:423016]
8. SRMS ENSGALG00000005852 174 1.556 - - - - 0.840 - - - - 0.716 src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
9. GAL ENSGALG00000007047 606 1.446 - - - - - 0.730 0.716 - - - galanin and GMAP prepropeptide [Source:NCBI gene;Acc:423117]
10. ENSGALG00000002522 ENSGALG00000002522 21 1 - - - - - - 1.000 - - -
11. AREG ENSGALG00000010866 16 1 - - - - - - 1.000 - - - amphiregulin [Source:NCBI gene;Acc:428752]
12. FOXN3 ENSGALG00000010665 18 1 - - - - - - 1.000 - - - forkhead box N3 [Source:HGNC Symbol;Acc:HGNC:1928]
13. C4A ENSGALG00000017040 5 1 - - - - - - 1.000 - - - complement C4A (Rodgers blood group), transcript variant X2
14. TRMT13 ENSGALG00000005290 95 1 - - - - - - 1.000 - - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
15. ZFYVE21 ENSGALG00000011534 7 1 - - - - - - 1.000 - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
16. PPIL3 ENSGALG00000008228 150 1 - - - - - - 1.000 - - - peptidylprolyl isomerase like 3 [Source:NCBI gene;Acc:424075]
17. CAD ENSGALG00000016524 94 1 - - - - - - 1.000 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, transcript variant X2
18. CSF1R ENSGALG00000005725 5 1 - - - - - - 1.000 - - - Gallus gallus colony stimulating factor 1 receptor (CSF1R), mRNA. [Source:RefSeq mRNA;Acc:NM_001321517]
19. PTPRS ENSGALG00000004048 70 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type S [Source:NCBI gene;Acc:396375]
20. GAL2 GAL2 32 1 - - - - - - 1.000 - - -
21. SUSD1 ENSGALG00000015677 12 1 - - - - - - 1.000 - - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
22. ENSGALG00000023265 ENSGALG00000023265 4 1 - - - - - - 1.000 - - -
23. CCNA1 ENSGALG00000017052 23 1 - - - - - - 1.000 - - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
24. KMO ENSGALG00000007503 7 1 - - - - - - 1.000 - - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
25. NEDD9 ENSGALG00000012747 30 1 - - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
26. APOAIV APOAIV 5 1 - - - - - - 1.000 - - -
27. CCDC96 9 1 - - - - - - 1.000 - - - coiled-coil domain containing 96
28. ENSGALG00000020781 ENSGALG00000020781 5 1 - - - - - - 1.000 - - -
29. CHRNA3 ENSGALG00000003014 6 1 - - - - - - 1.000 - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
30. TPP1 52 1 - - - - - - 1.000 - - - tripeptidyl peptidase 1
31. ENSGALG00000020719 ENSGALG00000020719 25 1 - - - - - - 1.000 - - -
32. SPAG8 2 1 - - - - - - 1.000 - - - sperm associated antigen 8, transcript variant X3
33. ABCC8 ENSGALG00000006172 41 1 - - - - - - 1.000 - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
34. C1orf172 C1orf172 1 1 - - - - - - 1.000 - - -
35. TMEM240 ENSGALG00000035387 14 1 - - - - - - 1.000 - - - transmembrane protein 240 [Source:HGNC Symbol;Acc:HGNC:25186]
36. MYCT1 ENSGALG00000013603 44 1 - - - - - - 1.000 - - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
37. KBTBD8 ENSGALG00000007569 20 1 - - - - - - 1.000 - - - kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
38. CEP350 ENSGALG00000003955 184 1 - - - - - - 1.000 - - - centrosomal protein 350 [Source:HGNC Symbol;Acc:HGNC:24238]
39. GCNT7 ENSGALG00000007717 11 1 - - - - - - 1.000 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
40. P2RY12 ENSGALG00000036470 20 1 - - - - - - 1.000 - - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
41. KDSR ENSGALG00000012882 57 1 - - - - - - 1.000 - - - 3-ketodihydrosphingosine reductase [Source:NCBI gene;Acc:420902]
42. EFCAB4A EFCAB4A 12 1 - - - - - - 1.000 - - -
43. GOLPH3L ENSGALG00000014640 272 1 - - - - - - 1.000 - - - golgi phosphoprotein 3 like, transcript variant X2
44. TMEM132D ENSGALG00000002671 12 1 - - - - - - 1.000 - - - transmembrane protein 132D, transcript variant X6
45. MEGF9 3 1 - - - - - - 1.000 - - - multiple EGF-like-domains 9
46. FAM83B ENSGALG00000016299 17 0.997 - - - - - - - - - 0.997 family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
47. GPR83 ENSGALG00000017212 6 0.988 - - - - - - - - - 0.988 G protein-coupled receptor 83 [Source:NCBI gene;Acc:428093]
48. TLR7 ENSGALG00000016590 6 0.988 - - - - - - - - - 0.988 toll like receptor 7 [Source:NCBI gene;Acc:418638]
49. ENSGALG00000026169 ENSGALG00000026169 30 0.988 - - - - - - - - - 0.988
50. CD38 ENSGALG00000014508 3 0.988 - - - - - - - - - 0.988 CD38 molecule [Source:NCBI gene;Acc:422827]
51. ENSGALG00000019640 ENSGALG00000019640 2 0.988 - - - - - - - - - 0.988
52. ANKS3 ENSGALG00000000643 2 0.988 - - - - - - - - - 0.988 ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
53. CCDC178 6 0.988 - - - - - - - - - 0.988 coiled-coil domain containing 178, transcript variant X3
54. NMU ENSGALG00000020151 29 0.988 - - - - - - - - - 0.988 neuromedin U [Source:NCBI gene;Acc:422748]
55. GTSF1 ENSGALG00000001109 15 0.988 - - - - - - - - - 0.988 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
56. SLC4A5 ENSGALG00000032146 3 0.988 - - - - - - - - - 0.988 solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
57. RHOC ENSGALG00000001569 53 0.988 - - - - - - - - - 0.988 ras homolog family member C [Source:NCBI gene;Acc:395869]
58. SLC2A1 ENSGALG00000004889 10 0.988 - - - - - - - - - 0.988 solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
59. ENSGALG00000008598 ENSGALG00000008598 2 0.988 - - - - - - - - - 0.988
60. KLHL35 ENSGALG00000017332 1 0.988 - - - - - - - - - 0.988 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
61. AHR2 ENSGALG00000023742 21 0.988 - - - - - - - - - 0.988 Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
62. IL8 ENSGALG00000026098 16 0.988 - - - - - - - - - 0.988 interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
63. VSTM2A ENSGALG00000041764 2 0.988 - - - - - - - - - 0.988 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
64. LY96 ENSGALG00000032701 18 0.988 - - - - - - - - - 0.988 lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
65. ENSGALG00000026135 ENSGALG00000026135 16 0.988 - - - - - - - - - 0.988
66. ENSGALG00000014502 ENSGALG00000014502 2 0.988 - - - - - - - - - 0.988
67. SEMA4D ENSGALG00000010697 10 0.973 - - - - - - - - - 0.973 semaphorin 4D [Source:NCBI gene;Acc:396331]
68. MDGA1 ENSGALG00000010145 13 0.972 - - - - - 0.972 - - - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
69. ST8SIA1 ENSGALG00000013211 14 0.971 - - - - 0.971 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
70. BTBD19 ENSGALG00000028978 20 0.971 - - - - 0.971 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
71. CDH6 ENSGALG00000012917 17 0.971 - - - - 0.971 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
72. DSE ENSGALG00000014963 70 0.97 - - - - - 0.970 - - - - dermatan sulfate epimerase, transcript variant X1
73. CAT-1 CAT-1 115 0.964 - - - - - 0.964 - - - -
74. CLGN ENSGALG00000009826 54 0.961 - - - - 0.961 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
75. SMCR8 ENSGALG00000024082 44 0.959 - - - - 0.959 - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
76. ENSGALG00000015097 ENSGALG00000015097 93 0.957 - - - - 0.957 - - - - -
77. LAPTM5 ENSGALG00000038636 18 0.954 - - - - 0.954 - - - - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
78. C9orf171 C9orf171 35 0.952 - - - - 0.952 - - - - -
79. PQLC3 ENSGALG00000016449 39 0.95 - - - - - 0.950 - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
80. CERKL ENSGALG00000008910 70 0.949 - - - - 0.949 - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
81. BNC1 ENSGALG00000006041 63 0.945 - - - - - 0.945 - - - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
82. KLHL28 ENSGALG00000012489 2 0.945 - - - - - 0.945 - - - - kelch like family member 28 [Source:HGNC Symbol;Acc:HGNC:19741]
83. NTRK2 ENSGALG00000012594 24 0.945 - - - - - 0.945 - - - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
84. ENSGALG00000022810 ENSGALG00000022810 1 0.945 - - - - - 0.945 - - - -
85. PTPRT ENSGALG00000037889 5 0.945 - - - - - 0.945 - - - - protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
86. HELB ENSGALG00000009885 8 0.945 - - - - - 0.945 - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
87. KCNK9 ENSGALG00000037285 1 0.945 - - - - - 0.945 - - - - potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
88. LOC417973 ENSGALG00000019325 9 0.945 - - - - - 0.945 - - - - uncharacterized LOC417973, transcript variant X1
89. TG ENSGALG00000039509 19 0.945 - - - - - 0.945 - - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
90. STAR ENSGALG00000003242 4 0.945 - - - - - 0.945 - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
91. ENSGALG00000027371 ENSGALG00000027371 1 0.945 - - - - - 0.945 - - - -
92. GPR156 ENSGALG00000014973 4 0.945 - - - - - 0.945 - - - - G protein-coupled receptor 156, transcript variant X4
93. MEX3D ENSGALG00000001106 2 0.945 - - - - - 0.945 - - - - mex-3 RNA binding family member D, transcript variant X3
94. HEPACAM2 ENSGALG00000009482 3 0.945 - - - - - 0.945 - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
95. IP3KA IP3KA 4 0.945 - - - - - 0.945 - - - -
96. SCARNA7 SCARNA7 2 0.945 - - - - - 0.945 - - - -
97. SYNRG ENSGALG00000005468 27 0.945 - - - - - 0.945 - - - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
98. SLC5A12 ENSGALG00000013304 1 0.945 - - - - - 0.945 - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
99. C8orf22 C8orf22 37 0.945 - - - - - 0.945 - - - -
100. CECR5 3 0.945 - - - - - 0.945 - - - - cat eye syndrome chromosome region, candidate 5, transcript variant X2

There are 315 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA