Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MMP2

Gene Name Gene ID Reads Annotation
MMP2 ENSGALG00000003580 13120 matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]











Genes with expression patterns similar to MMP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMP2 ENSGALG00000003580 13120 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
2. RPS20 ENSGALG00000014432 209638 1.657 - - - - - 0.737 0.920 - - - ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
3. gga-mir-1778 ENSGALG00000025181 8765 1.569 - - - - - 0.768 - - 0.801 - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
4. MYLK ENSGALG00000011708 10434 1.528 - - - - 0.724 - - - - 0.804 Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
5. LUM ENSGALG00000011271 44020 1.466 - - - - 0.765 0.701 - - - - lumican [Source:NCBI gene;Acc:417891]
6. AKR1D1 ENSGALG00000012834 15183 1.459 - - - - - 0.749 - - - 0.710 aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
7. SNX24 ENSGALG00000018874 4482 0.999 - - - - - - 0.999 - - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
8. TTLL5 ENSGALG00000010340 4875 0.999 - - - - - - 0.999 - - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
9. ING3 ENSGALG00000009023 4961 0.999 - - - - - - 0.999 - - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
10. CCNY ENSGALG00000007076 3921 0.999 - - - - - - 0.999 - - - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
11. RAB14 ENSGALG00000001474 12617 0.999 - - - - - - 0.999 - - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
12. RNF114 ENSGALG00000008021 6078 0.999 - - - - - - 0.999 - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
13. PSMD9 ENSGALG00000004352 7284 0.999 - - - - - - 0.999 - - - proteasome 26S subunit, non-ATPase 9 [Source:NCBI gene;Acc:416853]
14. NEDD4L ENSGALG00000034584 5881 0.999 - - - - - - 0.999 - - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
15. ENSGALG00000003150 ENSGALG00000003150 10001 0.999 - - - - - - 0.999 - - -
16. IL17RD ENSGALG00000005499 5844 0.999 - - - - - - 0.999 - - - interleukin 17 receptor D [Source:NCBI gene;Acc:395186]
17. ARHGEF28 ENSGALG00000014923 2523 0.998 - - - - - - 0.998 - - - Rho guanine nucleotide exchange factor 28 [Source:HGNC Symbol;Acc:HGNC:30322]
18. POLDIP3 ENSGALG00000011863 6424 0.998 - - - - - - 0.998 - - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
19. PRRC1 ENSGALG00000014703 9962 0.998 - - - - - - 0.998 - - - proline rich coiled-coil 1 [Source:NCBI gene;Acc:427127]
20. DGKD ENSGALG00000001730 4456 0.998 - - - - - - 0.998 - - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
21. VPS39 ENSGALG00000008991 4018 0.998 - - - - - - 0.998 - - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
22. ERP29 ENSGALG00000023510 47100 0.998 - - - - - - 0.998 - - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
23. NT5DC2 ENSGALG00000035596 27633 0.998 - - - - - - 0.998 - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
24. PASK ENSGALG00000006016 3096 0.998 - - - - - - 0.998 - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
25. GNA13 ENSGALG00000036028 9791 0.998 - - - - - - 0.998 - - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
26. ISCA1 ENSGALG00000012606 10342 0.998 - - - - - - 0.998 - - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
27. PTGR2 ENSGALG00000009269 4991 0.998 - - - - - - 0.998 - - - prostaglandin reductase 2 [Source:NCBI gene;Acc:423244]
28. WNT7B ENSGALG00000036255 3343 0.998 - - - - - - 0.998 - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
29. SULF1 ENSGALG00000039553 5115 0.997 - - - - - - 0.997 - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
30. KIF4A ENSGALG00000004195 25487 0.997 - - - - - - 0.997 - - - kinesin family member 4A [Source:NCBI gene;Acc:395823]
31. NUP93 ENSGALG00000003010 16504 0.996 - - - - - - 0.996 - - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
32. Sep-02_1 Sep-02_1 19203 0.995 - - - - - - 0.995 - - -
33. WDFY3 10775 0.995 - - - - - - 0.995 - - - WD repeat and FYVE domain containing 3, transcript variant X7
34. PRKACB ENSGALG00000028530 12506 0.995 - - - - - - 0.995 - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
35. MYL12A ENSGALG00000014854 63033 0.988 - - - - - - 0.988 - - - myosin, light chain 12A, regulatory, non-sarcomeric [Source:NCBI gene;Acc:396284]
36. ENSGALG00000022570 ENSGALG00000022570 90374 0.984 - - - - - - 0.984 - - -
37. MARCKSL1 ENSGALG00000032335 88728 0.968 - - - - - - 0.968 - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
38. SNRPD1 ENSGALG00000041334 219195 0.967 - - - - - - 0.967 - - - small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
39. SMNDC1 ENSGALG00000008561 14415 0.956 - - - - - - 0.956 - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
40. MSX2 ENSGALG00000038848 6950 0.955 - - - - - - 0.955 - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
41. TGFBR3 ENSGALG00000006038 2951 0.904 - - - - - - - 0.904 - - transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
42. UCHL5 ENSGALG00000002524 28460 0.865 - - - - - - 0.865 - - - ubiquitin C-terminal hydrolase L5 [Source:NCBI gene;Acc:424359]
43. DDRGK1 ENSGALG00000016003 9098 0.864 - - - - - - 0.864 - - - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
44. PUS1 ENSGALG00000002354 10153 0.862 - - - - - - 0.862 - - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
45. ACTG1_1 ENSGALG00000001381 64662 0.849 - - - - - - 0.849 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
46. ANXA1 ENSGALG00000015148 13804 0.845 - - - - - 0.845 - - - - annexin A1 [Source:NCBI gene;Acc:404271]
47. PRKCDBP PRKCDBP 2249 0.839 - - - - - - - 0.839 - -
48. MT-ND3 MT-ND3 510729 0.835 - - - - - 0.835 - - - -
49. LPAR4 ENSGALG00000004121 2543 0.825 - - - - - - - 0.825 - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
50. MYH9 ENSGALG00000043092 3026 0.818 - - - - - - - 0.818 - - myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:396469]
51. CALD1 ENSGALG00000033471 8950 0.816 - - - - - - - 0.816 - - caldesmon 1 [Source:NCBI gene;Acc:373965]
52. TRIQK 1395 0.812 - - - - - - - - 0.812 - triple QxxK/R motif containing
53. TOR4A ENSGALG00000008623 1364 0.806 - - - - - - - 0.806 - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
54. EGFLAM ENSGALG00000003726 4588 0.805 - - - - - - - 0.805 - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
55. TTYH3 ENSGALG00000004310 7422 0.804 - - - - - - - - 0.804 - tweety family member 3 [Source:HGNC Symbol;Acc:HGNC:22222]
56. NAV2 ENSGALG00000003999 6587 0.802 - - - - - 0.802 - - - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
57. ANAPC4 ENSGALG00000014378 1556 0.801 - - - - - - - - 0.801 - anaphase promoting complex subunit 4, transcript variant X2
58. TMED3 ENSGALG00000008272 2838 0.801 - - - - - - - 0.801 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
59. DPYSL3 ENSGALG00000007582 7743 0.798 - - - - - - - 0.798 - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
60. LEPROT ENSGALG00000011047 7132 0.797 - - - - - - - 0.797 - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
61. CXorf23 1582 0.795 - - - - - - - - 0.795 - chromosome X open reading frame 23, transcript variant X3
62. UBE2H ENSGALG00000031975 12964 0.795 - - - - - - - 0.795 - - ubiquitin conjugating enzyme E2 H [Source:NCBI gene;Acc:416678]
63. PRRG1 ENSGALG00000016266 3473 0.79 - - - - - 0.790 - - - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
64. CGNL1 ENSGALG00000004294 1177 0.785 - - - - - - - - 0.785 - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
65. CD9 ENSGALG00000017274 960 0.784 - - - - - - - 0.784 - - CD9 molecule [Source:NCBI gene;Acc:395527]
66. TOX2 ENSGALG00000003106 2472 0.783 - - - - - - - 0.783 - - TOX high mobility group box family member 2, transcript variant X1
67. ZNF593 ENSGALG00000000542 79105 0.783 - - - - - 0.783 - - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
68. NET1 ENSGALG00000008437 9850 0.782 - - - - - 0.782 - - - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
69. ENOX1 ENSGALG00000016967 1123 0.78 - - - - - - - 0.780 - - ecto-NOX disulfide-thiol exchanger 1 [Source:HGNC Symbol;Acc:HGNC:25474]
70. EEF1A EEF1A 1025209 0.778 - - - - - 0.778 - - - -
71. SFRP1 ENSGALG00000003473 5917 0.778 - - - - - - - 0.778 - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
72. TPM1 ENSGALG00000003521 11894 0.777 - - - - - - - 0.777 - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
73. SYF2 ENSGALG00000013639 267 0.775 - - - - - - - - 0.775 - SYF2 pre-mRNA splicing factor [Source:NCBI gene;Acc:419593]
74. COLEC10 ENSGALG00000033144 3436 0.774 - - - - - 0.774 - - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
75. CCDC85A ENSGALG00000043080 7624 0.772 - - - - - 0.772 - - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
76. CDH11 ENSGALG00000039985 18212 0.772 - - - - - - - - - 0.772 cadherin 11 [Source:NCBI gene;Acc:415797]
77. SPINK5 SPINK5 195 0.771 - - - - - - - - 0.771 -
78. SLIT3 ENSGALG00000001916 738 0.768 - - - - - - - 0.768 - - slit guidance ligand 3 [Source:NCBI gene;Acc:374173]
79. BAMBI ENSGALG00000040993 7562 0.767 - - - - - 0.767 - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
80. ADAMTS19 ENSGALG00000000151 3217 0.766 - - - - - - - 0.766 - - ADAM metallopeptidase with thrombospondin type 1 motif 19 [Source:HGNC Symbol;Acc:HGNC:17111]
81. PDGFRA ENSGALG00000013929 12501 0.766 - - - - 0.766 - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:NCBI gene;Acc:395509]
82. DECR1 ENSGALG00000036990 6360 0.765 - - - - - - - 0.765 - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
83. ENSGALG00000011687 ENSGALG00000011687 4553 0.765 - - - - - - - 0.765 - -
84. EYA4 ENSGALG00000031656 463 0.764 - - - - - - - - 0.764 - EYA transcriptional coactivator and phosphatase 4 [Source:NCBI gene;Acc:395716]
85. SGK3 ENSGALG00000043570 2045 0.764 - - - - - - - 0.764 - - serum/glucocorticoid regulated kinase family member 3 [Source:NCBI gene;Acc:420167]
86. GSN ENSGALG00000001446 5605 0.763 - - - - - - - 0.763 - - gelsolin [Source:NCBI gene;Acc:395774]
87. GLIPR2 ENSGALG00000028821 5791 0.763 - - - - - - - 0.763 - - GLI pathogenesis related 2, transcript variant X2
88. KRT19 ENSGALG00000019719 38711 0.762 - - - - - 0.762 - - - - keratin 19 [Source:NCBI gene;Acc:395861]
89. TRPC4 ENSGALG00000017044 300 0.76 - - - - - - - 0.760 - - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
90. SPCS3 ENSGALG00000010839 19106 0.758 - - - - - 0.758 - - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
91. TAPA1 TAPA1 8669 0.758 - - - - - 0.758 - - - -
92. MAP9 ENSGALG00000020253 785 0.756 - - - - - - - - 0.756 - microtubule associated protein 9, transcript variant X7
93. STK17A ENSGALG00000031117 454 0.756 - - - - - - - 0.756 - - serine/threonine kinase 17a [Source:NCBI gene;Acc:420775]
94. MUC5B MUC5B 62 0.755 - - - - - - - - 0.755 -
95. COL1A2 ENSGALG00000009641 46236 0.754 - - - - 0.754 - - - - - collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
96. ANO1 ENSGALG00000041808 5149 0.754 - - - - - 0.754 - - - - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
97. FGFRL1 ENSGALG00000037525 1687 0.753 - - - - - - - - 0.753 - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
98. DACT1 ENSGALG00000012023 1008 0.752 - - - - - - - - 0.752 - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
99. U3 U3 1604 0.751 - - - - - - - 0.751 - -
100. TCF7L2 ENSGALG00000008883 13688 0.751 - - - - - 0.751 - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]

There are 61 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA