Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MMP13

Gene Name Gene ID Reads Annotation
MMP13 ENSGALG00000017183 7 matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]











Genes with expression patterns similar to MMP13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMP13 ENSGALG00000017183 7 2 - - 1.000 - - - 1.000 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
2. COL4A3BP ENSGALG00000014952 96 1.773 - - 0.773 - - - 1.000 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
3. TBC1D2B ENSGALG00000003322 54 1.757 - - 0.859 - - - 0.898 - - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
4. GNPTG ENSGALG00000006441 50 1.662 - - 0.897 - - - 0.765 - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
5. CCDC125 ENSGALG00000015572 51 1.519 - - 0.812 - - - 0.707 - - - coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]
6. ENSGALG00000027367 ENSGALG00000027367 7 1 - - - - - - 1.000 - - -
7. LOC427545 ENSGALG00000004428 3 1 - - - - - - 1.000 - - - histamine H3 receptor-like
8. FGD4 ENSGALG00000012932 50 1 - - - - - - 1.000 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
9. ZBTB11 ENSGALG00000015334 22 1 - - - - - - 1.000 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
10. ST8SIA6 ENSGALG00000008671 8 1 - - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
11. LHX8 ENSGALG00000011369 77 1 - - - - - - 1.000 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
12. TRIM25 ENSGALG00000003144 12 1 - - - - - - 1.000 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
13. VRK2 ENSGALG00000032770 117 1 - - - - - - 1.000 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
14. DIRAS2 ENSGALG00000005323 11 1 - - - - - - 1.000 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
15. GLRA2 ENSGALG00000016571 10 1 - - - - - - 1.000 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
16. KCNV1 ENSGALG00000031449 64 1 - - - - - - 1.000 - - - potassium voltage-gated channel modifier subfamily V member 1
17. ADAM23 ENSGALG00000008582 28 1 - - - - - - 1.000 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
18. FGA ENSGALG00000009266 291 1 - - - - - - 1.000 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
19. PLA2G1BL ENSGALG00000007236 4 1 - - - - - - 1.000 - - - phospholipase A2, major isoenzyme-like
20. EGR4 ENSGALG00000016086 4 1 - - - - - - 1.000 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
21. SPERT ENSGALG00000016981 145 1 - - - - - - 1.000 - - - spermatid associated [Source:NCBI gene;Acc:418848]
22. POLR1A ENSGALG00000038160 236 1 - - - - - - 1.000 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
23. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - 1.000 - - -
24. RD RD 99 1 - - - - - - 1.000 - - -
25. CBLN4 ENSGALG00000030821 9 1 - - - - - - 1.000 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
26. HPS3 ENSGALG00000040089 44 1 - - - - - - 1.000 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
27. SNORD79 SNORD79 12 1 - - - - - - 1.000 - - -
28. FGF13 ENSGALG00000006508 8 1 - - - - - - 1.000 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
29. FOXP1 127 1 - - - - - - 1.000 - - - forkhead box P1, transcript variant X14
30. P2RY13 ENSGALG00000039432 16 1 - - - - - - 1.000 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
31. LZTS2 ENSGALG00000023612 9 1 - - - - - - 1.000 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
32. TRAIL-LIKE ENSGALG00000007240 8 0.994 - - 0.994 - - - - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
33. TMIE 6 0.994 - - 0.994 - - - - - - - transmembrane inner ear
34. EFHC1 ENSGALG00000016674 14 0.994 - - 0.994 - - - - - - - EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16406]
35. ENSGALG00000003796 ENSGALG00000003796 7 0.994 - - 0.994 - - - - - - -
36. ENSGALG00000007855 ENSGALG00000007855 7 0.994 - - 0.994 - - - - - - -
37. OR11A1 ENSGALG00000041229 9 0.994 - - 0.994 - - - - - - - olfactory receptor family 11 subfamily A member 1
38. TLR5 ENSGALG00000009392 28 0.994 - - 0.994 - - - - - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
39. INPP5J ENSGALG00000023266 6 0.994 - - 0.994 - - - - - - - inositol polyphosphate-5-phosphatase J [Source:HGNC Symbol;Acc:HGNC:8956]
40. TAF5L ENSGALG00000011098 17 0.994 - - 0.994 - - - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
41. JMJD4 ENSGALG00000005417 10 0.994 - - 0.994 - - - - - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
42. STAB1 21 0.989 - - 0.989 - - - - - - - stabilin 1, transcript variant X2
43. LRP6 ENSGALG00000031503 39 0.989 - - 0.989 - - - - - - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
44. ARHGDIG ENSGALG00000036819 18 0.988 - - 0.988 - - - - - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
45. ZNF385C ENSGALG00000003403 9 0.987 - - 0.987 - - - - - - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
46. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 0.987 - - 0.987 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
47. RAP2A ENSGALG00000016889 26 0.986 - - 0.986 - - - - - - - RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
48. SLC30A9 ENSGALG00000031415 36 0.986 - - 0.986 - - - - - - - solute carrier family 30 member 9
49. TMCO4 ENSGALG00000004081 31 0.984 - - 0.984 - - - - - - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
50. KCNC1 ENSGALG00000006220 15 0.983 - - 0.983 - - - - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
51. PLEKHF1 ENSGALG00000004474 8 0.983 - - 0.983 - - - - - - - pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
52. SLC2A1 ENSGALG00000004889 10 0.982 - - 0.982 - - - - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
53. AIM1 51 0.98 - - 0.980 - - - - - - - absent in melanoma 1, transcript variant X2
54. SPOCK3 ENSGALG00000009568 33 0.978 - - 0.978 - - - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
55. PPL ENSGALG00000002201 13 0.977 - - 0.977 - - - - - - - periplakin
56. MFSD8 ENSGALG00000010199 11 0.971 - - 0.971 - - - - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
57. WDR37 ENSGALG00000006749 44 0.971 - - 0.971 - - - - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
58. ENSGALG00000020349 ENSGALG00000020349 10 0.97 - - 0.970 - - - - - - -
59. ENSGALG00000027162 ENSGALG00000027162 8 0.969 - - 0.969 - - - - - - -
60. IGSF6 ENSGALG00000007059 25 0.968 - - 0.968 - - - - - - - immunoglobulin superfamily member 6 [Source:NCBI gene;Acc:771906]
61. KCNQ1 ENSGALG00000037138 179 0.967 - - 0.967 - - - - - - - potassium voltage-gated channel subfamily Q member 1 [Source:HGNC Symbol;Acc:HGNC:6294]
62. FANCA ENSGALG00000000516 250 0.963 - - 0.963 - - - - - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
63. ST6GAL2 ENSGALG00000016803 24 0.962 - - 0.962 - - - - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
64. IQSEC1 ENSGALG00000005042 24 0.961 - - 0.961 - - - - - - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
65. MYRF ENSGALG00000041253 13 0.96 - - 0.960 - - - - - - - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
66. ST6GALNAC1 ENSGALG00000001862 133 0.96 - - 0.960 - - - - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396168]
67. EX-FABP EX-FABP 516 0.955 - - 0.955 - - - - - - -
68. DRD2 ENSGALG00000007794 399 0.952 - - 0.952 - - - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
69. ALS2CL ENSGALG00000005430 161 0.951 - - 0.951 - - - - - - - ALS2 C-terminal like [Source:HGNC Symbol;Acc:HGNC:20605]
70. HECW1 ENSGALG00000037193 24 0.945 - - 0.945 - - - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
71. UROS ENSGALG00000013688 10 0.944 - - 0.944 - - - - - - - uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]
72. ZNF438 ENSGALG00000007266 26 0.944 - - 0.944 - - - - - - - zinc finger protein 438 [Source:HGNC Symbol;Acc:HGNC:21029]
73. MBLAC2 ENSGALG00000014649 16 0.943 - - 0.943 - - - - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
74. ARHGAP10 ENSGALG00000010031 31 0.942 - - 0.942 - - - - - - - Rho GTPase activating protein 10 [Source:HGNC Symbol;Acc:HGNC:26099]
75. CNR1 ENSGALG00000037511 38 0.94 - - 0.940 - - - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
76. GALNT2 ENSGALG00000011106 167 0.939 - - 0.939 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
77. GGH ENSGALG00000031130 40 0.939 - - 0.939 - - - - - - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
78. FOXRED2 ENSGALG00000012530 36 0.937 - - 0.937 - - - - - - - FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
79. SLC38A7 ENSGALG00000002313 25 0.936 - - 0.936 - - - - - - - solute carrier family 38 member 7, transcript variant X5
80. ANAPC1 ENSGALG00000008254 2519 0.935 - - 0.935 - - - - - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
81. ZNF410 ENSGALG00000010193 28 0.934 - - 0.934 - - - - - - - zinc finger protein 410 [Source:NCBI gene;Acc:423340]
82. TNS3 ENSGALG00000039139 63 0.934 - - 0.934 - - - - - - - tensin 3 [Source:NCBI gene;Acc:420792]
83. HGF/SF HGF/SF 345 0.933 - - 0.933 - - - - - - -
84. CCND2 ENSGALG00000017283 38 0.93 - - 0.930 - - - - - - - cyclin D2 [Source:NCBI gene;Acc:374047]
85. ENSGALG00000005498 ENSGALG00000005498 11 0.929 - - 0.929 - - - - - - -
86. PLXNC1 ENSGALG00000011309 69 0.928 - - - - - - 0.928 - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
87. NFAT5 ENSGALG00000039300 29 0.928 - - 0.928 - - - - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
88. CHST3 ENSGALG00000024056 308 0.926 - - - - - - 0.926 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
89. CFD ENSGALG00000040832 222 0.923 - - 0.923 - - - - - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
90. MKNK1 ENSGALG00000010440 196 0.923 - - 0.923 - - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
91. SLC35D3 ENSGALG00000030545 55 0.92 - - 0.920 - - - - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
92. C10ORF57 C10ORF57 249 0.92 - - 0.920 - - - - - - -
93. CHRNG ENSGALG00000007906 19 0.919 - - 0.919 - - - - - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
94. APPL1 ENSGALG00000005527 104 0.918 - - 0.918 - - - - - - - adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 [Source:HGNC Symbol;Acc:HGNC:24035]
95. KDSR ENSGALG00000012882 57 0.918 - - 0.918 - - - - - - - 3-ketodihydrosphingosine reductase [Source:NCBI gene;Acc:420902]
96. EFCAB11 ENSGALG00000020402 16 0.918 - - 0.918 - - - - - - - EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:HGNC:20357]
97. SHCBP1 ENSGALG00000004444 59 0.915 - - 0.915 - - - - - - - SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
98. ESRP1 ENSGALG00000031076 28 0.902 - - 0.902 - - - - - - - epithelial splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25966]
99. SLP76 SLP76 84 0.899 - - 0.899 - - - - - - -
100. FAM96A ENSGALG00000026448 41 0.898 - - 0.898 - - - - - - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]

There are 162 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA