Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MMP11

Gene Name Gene ID Reads Annotation
MMP11 ENSGALG00000005968 3 matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]











Genes with expression patterns similar to MMP11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMP11 ENSGALG00000005968 3 4 - - 1.000 1.000 1.000 - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
2. LRP3 ENSGALG00000004853 13 2 - - - - 1.000 - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
3. SMTN 18 2 - - - - 1.000 - - 1.000 - - smoothelin, transcript variant X2
4. TECPR1 ENSGALG00000003507 20 1 - - 1.000 - - - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
5. IL18R1 ENSGALG00000040621 12 1 - - - - - - - 1.000 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
6. SLC38A10 ENSGALG00000006880 34 1 - - - - - - - 1.000 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
7. BLB1 ENSGALG00000000141 13 1 - - - - - - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
8. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
9. COTL1 ENSGALG00000017644 81 1 - - - - - - - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
10. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
11. ENSGALG00000008047 ENSGALG00000008047 13 1 - - - - - - - 1.000 - -
12. ABCG1 ENSGALG00000016164 10 1 - - - - - - - 1.000 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
13. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
14. FADS6 ENSGALG00000029445 12 1 - - - - - - - 1.000 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
15. FAM124A ENSGALG00000017016 0 1 - - - - - - - 1.000 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
16. CMTR1 ENSGALG00000010149 12 1 - - - 1.000 - - - - - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
17. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
18. BFGF BFGF 1 1 - - 1.000 - - - - - - -
19. PDCL2 ENSGALG00000013783 9 1 - - 1.000 - - - - - - - phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
20. RAD54L ENSGALG00000010356 7 1 - - - - - - - 1.000 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
21. SLC15A1 ENSGALG00000016884 10 1 - - - - - - - 1.000 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
22. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
23. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
24. ANKRD29 ENSGALG00000015034 1 1 - - 1.000 - - - - - - - ankyrin repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:27110]
25. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
26. CYR61 ENSGALG00000008661 43 1 - - - - - - - 1.000 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
27. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
28. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
29. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
30. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
31. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
32. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
33. COL4A3 ENSGALG00000038612 41 1 - - - - - - - 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
34. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
35. ENSGALG00000022967 ENSGALG00000022967 240 1 - - - - - - - 1.000 - -
36. CFD ENSGALG00000040832 222 1 - - - - - - - 1.000 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
37. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
38. B3GALT1 ENSGALG00000010931 6 1 - - 1.000 - - - - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
39. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
40. UBE3C ENSGALG00000006461 57 1 - - - 1.000 - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
41. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
42. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
43. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
44. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
45. SOD3 ENSGALG00000018557 16 1 - - - - 1.000 - - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
46. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
47. FAM83C ENSGALG00000031906 1 1 - - - - 1.000 - - - - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
48. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
49. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
50. SLC30A8 ENSGALG00000034377 3 1 - - - - 1.000 - - - - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
51. MUT ENSGALG00000016697 43 1 - - - - - - - 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
52. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
53. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
54. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
55. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
56. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
57. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
58. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
59. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
60. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
61. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
62. TRAF6 ENSGALG00000007932 12 1 - - - - - - - 1.000 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
63. SLC25A40 ENSGALG00000019662 1 1 - - - - 1.000 - - - - - solute carrier family 25 member 40 [Source:HGNC Symbol;Acc:HGNC:29680]
64. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
65. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
66. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
67. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
68. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
69. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
70. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
71. gga-mir-6699 ENSGALG00000027236 1 1 - - 1.000 - - - - - - - gga-mir-6699 [Source:miRBase;Acc:MI0022521]
72. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
73. KCNS2 ENSGALG00000043764 9 1 - - - - 1.000 - - - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
74. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
75. SGSM1 ENSGALG00000005379 10 1 - - - - 1.000 - - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
76. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
77. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
78. ENSGALG00000027201 ENSGALG00000027201 12 1 - - - - 1.000 - - - - -
79. LICOS LICOS 13 1 - - - - - - - 1.000 - -
80. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
81. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
82. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
83. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
84. NCK2 ENSGALG00000016799 152 1 - - - - 1.000 - - - - - NCK adaptor protein 2 [Source:NCBI gene;Acc:418727]
85. HELIOS HELIOS 2 1 - - - - 1.000 - - - - -
86. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
87. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
88. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
89. KLF11 ENSGALG00000016440 65 1 - - 1.000 - - - - - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
90. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
91. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
92. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
93. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
94. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
95. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
96. RQCD1 RQCD1 110 1 - - - - 1.000 - - - - -
97. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
98. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
99. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
100. NANOG ENSGALG00000027772 89 1 - - 1.000 - - - - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]

There are 244 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA