Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MMP1

Gene Name Gene ID Reads Annotation
MMP1 ENSG00000196611 1 matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]



Genes with expression patterns similar to MMP1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. MMP1 ENSG00000196611 1 2 1.000 1.000 matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]
2. SNORA65 ENSG00000201302 0 1 - 1.000 small nucleolar RNA, H/ACA box 65 [Source:HGNC Symbol;Acc:HGNC:10222]
3. SERHL2 ENSG00000183569 0 1 - 1.000 serine hydrolase like 2 [Source:HGNC Symbol;Acc:HGNC:29446]
4. LOC100129083 0 1 - 1.000 uncharacterized LOC100129083
5. C20orf78 ENSG00000149443 0 1 - 1.000 chromosome 20 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:16210]
6. HLA-J ENSG00000204622, ENSG00000223439, ENSG00000226586, ENSG00000228220, ENSG00000228524, ENSG00000234074, ENSG00000235309, ENSG00000243336 3 1 - 1.000 major histocompatibility complex, class I, J (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4967]
7. DNAH17-AS1 ENSG00000267432 0 1 - 1.000 DNAH17 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48594]
8. LINC00032 ENSG00000283945 1 1 1.000 - long intergenic non-protein coding RNA 32 [Source:HGNC Symbol;Acc:HGNC:16506]
9. LINC00840 ENSG00000226808 0 1 - 1.000 long intergenic non-protein coding RNA 840 [Source:HGNC Symbol;Acc:HGNC:44987]
10. IFNL1 ENSG00000182393 0 1 - 1.000 interferon lambda 1 [Source:HGNC Symbol;Acc:HGNC:18363]
11. FAM87B ENSG00000177757 3 1 - 1.000 family with sequence similarity 87 member B [Source:HGNC Symbol;Acc:HGNC:32236]
12. TTLL13P ENSG00000213471 0 1 - 1.000 tubulin tyrosine ligase like 13, pseudogene [Source:HGNC Symbol;Acc:HGNC:32484]
13. FAM182A ENSG00000125804 0 1 - 1.000 family with sequence similarity 182 member A [Source:HGNC Symbol;Acc:HGNC:16222]
14. DNMT3L ENSG00000142182 0 1 - 1.000 DNA methyltransferase 3 like [Source:HGNC Symbol;Acc:HGNC:2980]
15. FAM177B ENSG00000197520 0 1 - 1.000 family with sequence similarity 177 member B [Source:HGNC Symbol;Acc:HGNC:34395]
16. NAALADL2-AS2 ENSG00000226779 3 1 - 1.000 NAALADL2 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41015]
17. NLRP11 ENSG00000179873 5 1 1.000 - NLR family pyrin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:22945]
18. SFTA3 ENSG00000229415 0 1 - 1.000 surfactant associated 3 [Source:HGNC Symbol;Acc:HGNC:18387]
19. CD1B ENSG00000158485 0 1 - 1.000 CD1b molecule [Source:HGNC Symbol;Acc:HGNC:1635]
20. MID1IP1-AS1 ENSG00000238123 3 1 1.000 - MID1IP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40932]
21. SLC25A19 ENSG00000125454 0 1 - 1.000 solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]
22. CYMP ENSG00000240194 2 1 - 1.000 chymosin pseudogene [Source:HGNC Symbol;Acc:HGNC:2588]
23. VWA3B ENSG00000168658 5 1 1.000 - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
24. PDE6H ENSG00000139053 4 1 1.000 - phosphodiesterase 6H [Source:HGNC Symbol;Acc:HGNC:8790]
25. LINC01191 ENSG00000234199 0 1 - 1.000 long intergenic non-protein coding RNA 1191 [Source:HGNC Symbol;Acc:HGNC:49595]
26. ZNF705G ENSG00000215372, ENSG00000274195 0 1 - 1.000 zinc finger protein 705G [Source:HGNC Symbol;Acc:HGNC:37134]
27. CETN4P ENSG00000224786 3 1 1.000 - centrin 4, pseudogene [Source:HGNC Symbol;Acc:HGNC:35450]
28. C12orf40 ENSG00000180116 7 1 - 1.000 chromosome 12 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:26846]
29. LINC00577 LINC00577 6 1 1.000 -
30. WASH7P ENSG00000227232 0 1 - 1.000 WAS protein family homolog 7, pseudogene [Source:HGNC Symbol;Acc:HGNC:38034]
31. SNORD127 ENSG00000239043 1 1 1.000 - small nucleolar RNA, C/D box 127 [Source:HGNC Symbol;Acc:HGNC:33555]
32. SPATA25 ENSG00000149634 0 1 - 1.000 spermatogenesis associated 25 [Source:HGNC Symbol;Acc:HGNC:16158]
33. LOC102723895 0 1 - 1.000 uncharacterized LOC102723895
34. TMEM252 ENSG00000181778 1 1 1.000 - transmembrane protein 252 [Source:HGNC Symbol;Acc:HGNC:28537]
35. LINC00377 ENSG00000229246 0 1 - 1.000 long intergenic non-protein coding RNA 377 [Source:HGNC Symbol;Acc:HGNC:42703]
36. ARL14 ENSG00000179674 1 1 1.000 - ADP ribosylation factor like GTPase 14 [Source:HGNC Symbol;Acc:HGNC:22974]
37. KRT3 ENSG00000186442 2 1 1.000 - keratin 3 [Source:HGNC Symbol;Acc:HGNC:6440]
38. CYP1A2 ENSG00000140505 4 1 1.000 - cytochrome P450 family 1 subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:2596]
39. YWHAEP1 ENSG00000232727 6 1 1.000 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:49442]
40. ANP32AP1 ENSG00000259516 0 1 - 1.000 acidic nuclear phosphoprotein 32 family member A pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42949]
41. KCNK7 ENSG00000173338 0 1 - 1.000 potassium two pore domain channel subfamily K member 7 [Source:HGNC Symbol;Acc:HGNC:6282]
42. KRT14 ENSG00000186847 0 1 - 1.000 keratin 14 [Source:HGNC Symbol;Acc:HGNC:6416]
43. TUBAL3 ENSG00000178462 0 1 - 1.000 tubulin alpha like 3 [Source:HGNC Symbol;Acc:HGNC:23534]
44. OR2L2 ENSG00000203663 0 1 - 1.000 olfactory receptor family 2 subfamily L member 2 [Source:HGNC Symbol;Acc:HGNC:8266]
45. LOC101929164 0 1 - 1.000 uncharacterized LOC101929164
46. CD300LF ENSG00000186074 1 1 1.000 - CD300 molecule like family member f [Source:HGNC Symbol;Acc:HGNC:29883]
47. LOC101927845 0 1 - 1.000 uncharacterized LOC101927845
48. IQCJ ENSG00000214216 2 1 1.000 - IQ motif containing J [Source:HGNC Symbol;Acc:HGNC:32406]
49. CEBPE ENSG00000092067 0 1 - 1.000 CCAAT enhancer binding protein epsilon [Source:HGNC Symbol;Acc:HGNC:1836]
50. MMP19 ENSG00000123342 3 1 1.000 - matrix metallopeptidase 19 [Source:HGNC Symbol;Acc:HGNC:7165]
51. LOC100288123 0 1 - 1.000 uncharacterized LOC100288123
52. C1QTNF8 ENSG00000184471 0 1 - 1.000 C1q and TNF related 8 [Source:HGNC Symbol;Acc:HGNC:31374]
53. LINC00676 ENSG00000234854 0 1 - 1.000 long intergenic non-protein coding RNA 676 [Source:HGNC Symbol;Acc:HGNC:44394]
54. C1orf68 ENSG00000198854 0 1 - 1.000 chromosome 1 open reading frame 68 [Source:HGNC Symbol;Acc:HGNC:29468]
55. LOC284395 2 1 1.000 - uncharacterized LOC284395
56. LINC00482 ENSG00000185168 3 1 - 1.000 long intergenic non-protein coding RNA 482 [Source:HGNC Symbol;Acc:HGNC:26816]
57. LOC101929023 2 1 1.000 - uncharacterized LOC101929023, transcript variant 2
58. SNTN ENSG00000188817 3 1 1.000 - sentan, cilia apical structure protein [Source:HGNC Symbol;Acc:HGNC:33706]
59. TEX38 ENSG00000186118 5 1 - 1.000 testis expressed 38 [Source:HGNC Symbol;Acc:HGNC:29589]
60. KCNG3 ENSG00000171126 0 1 - 1.000 potassium voltage-gated channel modifier subfamily G member 3 [Source:HGNC Symbol;Acc:HGNC:18306]
61. C4orf51 ENSG00000237136 0 1 - 1.000 chromosome 4 open reading frame 51 [Source:HGNC Symbol;Acc:HGNC:37264]
62. RARRES3 ENSG00000133321 0 1 - 1.000 retinoic acid receptor responder 3 [Source:HGNC Symbol;Acc:HGNC:9869]
63. PDIA2 ENSG00000185615 4 1 - 1.000 protein disulfide isomerase family A member 2 [Source:HGNC Symbol;Acc:HGNC:14180]
64. IGF2BP2-AS1 ENSG00000163915 3 1 1.000 - IGF2BP2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:32674]
65. LOC101929497 0 1 - 1.000 uncharacterized LOC101929497
66. CHKB-CPT1B ENSG00000254413 0 1 - 1.000 CHKB-CPT1B readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:41998]
67. MMP13 ENSG00000137745 0 1 - 1.000 matrix metallopeptidase 13 [Source:HGNC Symbol;Acc:HGNC:7159]
68. MAP3K15 ENSG00000180815 0 1 - 1.000 mitogen-activated protein kinase kinase kinase 15 [Source:HGNC Symbol;Acc:HGNC:31689]
69. LOC101927780 10 1 - 1.000 uncharacterized LOC101927780, transcript variant 2
70. DPRX ENSG00000204595 0 1 - 1.000 divergent-paired related homeobox [Source:HGNC Symbol;Acc:HGNC:32166]
71. TSSK1B ENSG00000212122 0 1 - 1.000 testis specific serine kinase 1B [Source:HGNC Symbol;Acc:HGNC:14968]
72. PTGES3L-AARSD1 ENSG00000108825 5 1 1.000 - PTGES3L-AARSD1 readthrough [Source:HGNC Symbol;Acc:HGNC:43946]
73. LOC101927701 0 1 - 1.000 uncharacterized LOC101927701
74. LINC00704 0 1 - 1.000 long intergenic non-protein coding RNA 704
75. GFAP ENSG00000131095 3 1 1.000 - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
76. OTX1 ENSG00000115507 4 1 - 1.000 orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8521]
77. BTBD18 ENSG00000233436 0 1 - 1.000 BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:37214]
78. CCER1 ENSG00000197651 0 1 - 1.000 coiled-coil glutamate rich protein 1 [Source:HGNC Symbol;Acc:HGNC:28373]
79. LOC101929595 0 1 - 1.000 uncharacterized LOC101929595
80. ISM1-AS1 ENSG00000226263 0 1 - 1.000 ISM1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44313]
81. VWA5B2 ENSG00000145198 2 1 1.000 - von Willebrand factor A domain containing 5B2 [Source:HGNC Symbol;Acc:HGNC:25144]
82. TUBA3E ENSG00000152086 0 1 - 1.000 tubulin alpha 3e [Source:HGNC Symbol;Acc:HGNC:20765]
83. AADACP1 ENSG00000240602 2 1 1.000 - arylacetamide deacetylase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50305]
84. HEPHL1 ENSG00000181333 0 1 - 1.000 hephaestin like 1 [Source:HGNC Symbol;Acc:HGNC:30477]
85. LINC01220 ENSG00000259687 10 1 1.000 - long intergenic non-protein coding RNA 1220 [Source:HGNC Symbol;Acc:HGNC:49664]
86. ODF1 ENSG00000155087 2 1 1.000 - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
87. RASSF9 ENSG00000198774 23 1 1.000 - Ras association domain family member 9 [Source:HGNC Symbol;Acc:HGNC:15739]
88. ZNF280A ENSG00000169548, ENSG00000275499 54 1 1.000 - zinc finger protein 280A [Source:HGNC Symbol;Acc:HGNC:18597]
89. GLS2 ENSG00000135423 4 1 1.000 - glutaminase 2 [Source:HGNC Symbol;Acc:HGNC:29570]
90. FAM167A-AS1 ENSG00000184608, ENSG00000285275 0 1 - 1.000 FAM167A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:15548]
91. LOC339539 0 1 - 1.000 uncharacterized LOC339539
92. XDH ENSG00000158125 0 1 - 1.000 xanthine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12805]
93. LCN15 ENSG00000177984 0 1 - 1.000 lipocalin 15 [Source:HGNC Symbol;Acc:HGNC:33777]
94. LINC00687 ENSG00000228422 0 1 - 1.000 long intergenic non-protein coding RNA 687 [Source:HGNC Symbol;Acc:HGNC:16194]
95. LOC100505625 3 1 - 1.000 uncharacterized LOC100505625
96. LARS2-AS1 ENSG00000232455 4 1 - 1.000 LARS2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40796]
97. CRISP2 ENSG00000124490 2 1 - 1.000 cysteine rich secretory protein 2 [Source:HGNC Symbol;Acc:HGNC:12024]
98. NHLRC4 ENSG00000257108 18 1 1.000 - NHL repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:26700]
99. IGSF11-AS1 ENSG00000239877 0 1 - 1.000 IGSF11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40777]
100. TAS2R13 ENSG00000212128, ENSG00000273457, ENSG00000277254 2 1 1.000 - taste 2 receptor member 13 [Source:HGNC Symbol;Acc:HGNC:14919]

There are 26 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA