Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MMD

Gene Name Gene ID Reads Annotation
MMD ENSGALG00000003078 21311 monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]











Genes with expression patterns similar to MMD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMD ENSGALG00000003078 21311 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
2. TMEM199 ENSGALG00000023757 10781 1.645 - - - - - - 0.809 0.836 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
3. SERINC1 ENSGALG00000014868 12484 1.624 - - - - 0.723 - 0.901 - - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
4. HMGN1 ENSGALG00000016067 17375 1.619 - - - - 0.738 - 0.881 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
5. FBXO9 ENSGALG00000016320 9600 1.591 - - - - - - 0.737 0.854 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
6. CPSF4 ENSGALG00000004714 14353 1.562 - - - - - - 0.769 0.793 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
7. TPMT ENSGALG00000012687 9537 1.54 - - - - 0.761 - 0.779 - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
8. PPAP2B PPAP2B 11002 1.527 - - - - 0.753 - 0.774 - - -
9. GLO1 ENSGALG00000010127 31662 1.524 - - - - - - 0.753 0.771 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
10. FKBP12 FKBP12 64317 1.511 - - - - 0.747 - 0.764 - - -
11. PPIH ENSGALG00000004874 25558 1.51 - - - - 0.733 - 0.777 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
12. PPAT ENSGALG00000013728 7563 1.508 - - - - - - 0.754 0.754 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
13. ADAR ENSGALG00000021475 6004 1.502 - - - - - - 0.747 0.755 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
14. DHX33 ENSGALG00000001630 7783 1.455 - - - - 0.703 - 0.752 - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
15. TTC37 ENSGALG00000014670 5715 1.451 - - - - 0.707 - 0.744 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
16. SCAMP5 ENSGALG00000014116 8877 1.449 - - 0.735 - 0.714 - - - - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
17. PWP1 ENSGALG00000012631 10536 1.437 - - - - 0.707 - 0.730 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
18. DEK ENSGALG00000012684 14179 0.88 - - - - - - 0.880 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
19. COMMD1 ENSGALG00000008931 12202 0.872 - - - - - - 0.872 - - - copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
20. PCNP ENSGALG00000015330 15750 0.871 - - - - - - 0.871 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
21. TRABD ENSGALG00000030705 6577 0.87 - - - - - - 0.870 - - - TraB domain containing [Source:NCBI gene;Acc:417746]
22. PPP2R5C ENSGALG00000029996 5759 0.87 - - - - - - 0.870 - - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
23. LDB2 ENSGALG00000014485 22490 0.867 - - - - - - 0.867 - - - LIM domain binding 2 [Source:NCBI gene;Acc:395631]
24. SEC11A ENSGALG00000037553 32123 0.866 - - - - - - 0.866 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
25. XPR1 ENSGALG00000003893 5642 0.861 - - - - - - 0.861 - - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
26. TXN2 ENSGALG00000012532 12518 0.86 - - - - - - 0.860 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
27. SRI ENSGALG00000008985 13865 0.857 - - - - - - 0.857 - - - sorcin [Source:NCBI gene;Acc:420538]
28. ENSGALG00000016887 ENSGALG00000016887 20086 0.857 - - - - - - 0.857 - - -
29. ATP6V0B ENSGALG00000010091 14901 0.853 - - - - - - - 0.853 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
30. Mar-05 Mar-05 6330 0.848 - - - - - - 0.848 - - -
31. XBP1 ENSGALG00000005796 14007 0.847 - - - - - - 0.847 - - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
32. ENSGALG00000006463 ENSGALG00000006463 45151 0.845 - - - - - - 0.845 - - -
33. NIPSNAP3L ENSGALG00000027334 7514 0.845 - - - - - - 0.845 - - - nipsnap homolog 3-like
34. TACC3 ENSGALG00000015709 17336 0.843 - - - - - - 0.843 - - - transforming acidic coiled-coil containing protein 3 [Source:NCBI gene;Acc:422899]
35. DOCK7 6385 0.839 - - - - - - 0.839 - - - dedicator of cytokinesis 7, transcript variant X3
36. UQCRC2 ENSGALG00000002490 23477 0.838 - - - - - - 0.838 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
37. NDUFS7 ENSGALG00000009703 19674 0.837 - - - - - - 0.837 - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
38. SOD1 ENSGALG00000015844 35836 0.837 - - - - - - 0.837 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
39. BRD7 ENSGALG00000003786 26858 0.832 - - - - - - 0.832 - - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
40. TXNDC12 ENSGALG00000010569 13822 0.831 - - - - - - 0.831 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
41. HMGN3 ENSGALG00000015880 30919 0.831 - - - - - - 0.831 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
42. PDCD10 ENSGALG00000009477 7061 0.828 - - - - - - 0.828 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
43. ZC3H14 ENSGALG00000010622 7024 0.828 - - - - - - 0.828 - - - zinc finger CCCH-type containing 14 [Source:NCBI gene;Acc:423399]
44. MYCBP ENSGALG00000024295 13273 0.828 - - - - - - 0.828 - - - MYC binding protein
45. REEP5 ENSGALG00000023157 6282 0.827 - - - - - - 0.827 - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
46. ZMAT2 ENSGALG00000041746 23601 0.827 - - - - - - 0.827 - - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
47. PDIA6 ENSGALG00000016447 51308 0.826 - - - - - - 0.826 - - - protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
48. EIF2S1 ENSGALG00000009565 63906 0.826 - - - - - - 0.826 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
49. CAT ENSGALG00000030187 7534 0.825 - - - - - - 0.825 - - - catalase [Source:NCBI gene;Acc:423600]
50. NDUFS8 ENSGALG00000040173 24745 0.824 - - - - - - 0.824 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
51. MORF4L1 ENSGALG00000008146 29940 0.823 - - - - - - 0.823 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
52. SSBP1 ENSGALG00000012876 34256 0.822 - - - - - - 0.822 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
53. TMA16 ENSGALG00000009501 6651 0.822 - - - - - - 0.822 - - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
54. THYN1 ENSGALG00000001529 9423 0.821 - - - - - - 0.821 - - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
55. ARFIP1 ENSGALG00000041361 7351 0.821 - - - - - - 0.821 - - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
56. COMMD5 ENSGALG00000008867 12173 0.82 - - - - - - 0.820 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
57. DUT ENSGALG00000038032 34659 0.82 - - - - - - 0.820 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
58. PPP1R7 ENSGALG00000031766 22187 0.817 - - - - - - 0.817 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
59. STRN3 ENSGALG00000040464 9045 0.817 - - - - - - 0.817 - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
60. ZCCHC8 ENSGALG00000004486 3201 0.816 - - - - - - 0.816 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
61. HNRNPR ENSGALG00000000814 32290 0.814 - - - - - - - 0.814 - - heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:419570]
62. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 0.814 - - - - - - 0.814 - - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
63. GPX8 ENSGALG00000026704 4497 0.812 - - - - - - 0.812 - - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
64. TMEM123 ENSGALG00000017185 6798 0.811 - - - - - - 0.811 - - - transmembrane protein 123 [Source:NCBI gene;Acc:418984]
65. RMI1 ENSGALG00000012592 3750 0.811 - - - - - - 0.811 - - - RecQ mediated genome instability 1 [Source:NCBI gene;Acc:431669]
66. SLC25A3 ENSGALG00000011514 62606 0.809 - - - - - - 0.809 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
67. LUC7L2 ENSGALG00000036238 11817 0.806 - - - - - - 0.806 - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
68. MRPL20 ENSGALG00000001542 28764 0.804 - - - - - - 0.804 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
69. HOXA7 ENSGALG00000026989 6746 0.801 - - - - - - 0.801 - - - homeobox A7 [Source:NCBI gene;Acc:395290]
70. CLINT1 ENSGALG00000003702 11269 0.801 - - - - - - 0.801 - - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
71. NBL1 ENSGALG00000040297 8165 0.801 - - - - - - 0.801 - - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
72. BLMH ENSGALG00000004259 36907 0.801 - - - - - - 0.801 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
73. THRAP3 ENSGALG00000002144 21958 0.8 - - - - - - 0.800 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
74. PSMB4 ENSGALG00000000905 46735 0.8 - - - - - - 0.800 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
75. Sep-15 Sep-15 6935 0.798 - - - - - - 0.798 - - -
76. DNAJC9 ENSGALG00000002701 19249 0.797 - - - - - - 0.797 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
77. DPP9 ENSGALG00000004200 4515 0.796 - - - - - - 0.796 - - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
78. PDIA4 ENSGALG00000043006 22992 0.795 - - - - - - 0.795 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
79. EIF3B ENSGALG00000040999 49971 0.795 - - - - - - 0.795 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
80. MTAP ENSGALG00000008174 10976 0.794 - - - - - - 0.794 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
81. RCN2 ENSGALG00000039284 17848 0.794 - - - - - - 0.794 - - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
82. HMGB2 ENSGALG00000010745 89235 0.793 - - - - - - 0.793 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
83. PPP1CC ENSGALG00000004571 14748 0.793 - - - - - - 0.793 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
84. RPA2 39663 0.79 - - - - - - 0.790 - - - replication protein A2
85. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.79 - - - - - - 0.790 - - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
86. ANAPC16 ENSGALG00000004410 18001 0.79 - - - - - - 0.790 - - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
87. PCF11 ENSGALG00000017249 4714 0.79 - - - - - - 0.790 - - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
88. ENSGALG00000016007 ENSGALG00000016007 62448 0.787 - - - - 0.787 - - - - -
89. WDR12 ENSGALG00000008470 7654 0.787 - - - - - - 0.787 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
90. RYK ENSGALG00000006488 10533 0.786 - - - - - - 0.786 - - - receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:10481]
91. SDF2 ENSGALG00000037709 12283 0.786 - - - - - - 0.786 - - - stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]
92. PFKP ENSGALG00000006939 10149 0.786 - - - - - - 0.786 - - - phosphofructokinase, platelet [Source:NCBI gene;Acc:428411]
93. EWSR1 ENSGALG00000008149 13014 0.785 - - - - - - 0.785 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
94. NDUFA1 ENSGALG00000008613 20410 0.785 - - - - - - 0.785 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:NCBI gene;Acc:772150]
95. RALB ENSGALG00000026493 14590 0.785 - - - - - - 0.785 - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
96. AATF ENSGALG00000005420 6501 0.785 - - - - - - 0.785 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
97. DKC1 ENSGALG00000005054 30350 0.781 - - - - - - 0.781 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
98. SEC22B ENSGALG00000039704 16080 0.781 - - - - 0.781 - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
99. ULK2 ENSGALG00000004727 10729 0.781 - - - - - - 0.781 - - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
100. NUTF2 ENSGALG00000001602 32832 0.781 - - - - - - 0.781 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]

There are 321 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA