Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MIB1

Gene Name Gene ID Reads Annotation
MIB1 ENSGALG00000014974 3583 mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]











Genes with expression patterns similar to MIB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MIB1 ENSGALG00000014974 3583 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
2. YBX3 ENSGALG00000031890 819 2.681 - - 0.923 - - - - - 0.889 0.869 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
3. SESN1 ENSGALG00000015286 2387 2.342 - - 0.909 - - - 0.722 - - 0.711 sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
4. ASH2L ENSGALG00000003233 4814 2.327 - - 0.864 - - - 0.745 0.718 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
5. FAM18B1 ENSGALG00000001335 5177 2.193 - - - - - - 0.700 0.722 0.771 - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
6. HMGB3 ENSGALG00000009071 12011 2.178 - - - - - - 0.704 0.761 - 0.713 high mobility group box 3 [Source:NCBI gene;Acc:396232]
7. DCP1B 1306 1.813 - - 0.917 - - - - - 0.896 - decapping mRNA 1B
8. ZDHHC7 ENSGALG00000042522 1774 1.792 - - 0.916 - - - - - 0.876 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
9. CHAMP1 ENSGALG00000016813 508 1.784 - - 0.964 - - - - - 0.820 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
10. RBBP8 ENSGALG00000014982 3255 1.775 - - 0.887 - - - - - 0.888 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
11. LRRC71 ENSGALG00000027351 695 1.748 - - 0.961 - - - - - 0.787 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
12. SLC37A3 ENSGALG00000012849 836 1.745 - - 0.949 - - - - - 0.796 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
13. RALGAPA2 240 1.737 - - 0.925 - - - - - 0.812 - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
14. MBSP MBSP 5634 1.699 - - 0.900 - - - - - 0.799 -
15. TRUB1 ENSGALG00000009091 1005 1.693 - - 0.858 - - - - - 0.835 - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
16. WTAP ENSGALG00000011660 10811 1.685 - - 0.824 - - - - - 0.861 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
17. PEMT ENSGALG00000004875 4094 1.675 - - 0.954 - - - - 0.721 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
18. WDR92 ENSGALG00000008760 3934 1.672 - - 0.951 - - - - - 0.721 - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
19. CAMSAP1 ENSGALG00000001692 2617 1.668 - - 0.940 - - - 0.728 - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
20. TTPAL ENSGALG00000004244 2734 1.668 - - 0.951 - - - - - 0.717 - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
21. POGZ ENSGALG00000036365 4056 1.658 - - 0.878 - - - - - 0.780 - pogo transposable element with ZNF domain, transcript variant X2
22. PGS1 ENSGALG00000007181 3187 1.658 - - 0.818 - - - - - 0.840 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
23. CHGA ENSGALG00000010820 1028 1.653 - - 0.947 - - - - - 0.706 - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
24. SMC4 ENSGALG00000009553 15715 1.653 - - 0.892 - - - 0.761 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
25. C6ORF162 C6ORF162 4217 1.653 - - 0.893 - - - 0.760 - - -
26. RFK ENSGALG00000033558 1364 1.649 - - 0.947 - - - - 0.702 - - riboflavin kinase, transcript variant X3
27. RUVBL1 ENSGALG00000005931 9379 1.642 - - - - - - 0.779 - 0.863 - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
28. RRP1B ENSGALG00000035696 12309 1.639 - - - - - - 0.750 - 0.889 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
29. UHRF2 ENSGALG00000015052 1268 1.637 - - 0.887 - - - - - 0.750 - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
30. KDM6A ENSGALG00000016217 2302 1.637 - - 0.935 - - - - - - 0.702 lysine demethylase 6A, transcript variant X14
31. UBR2 ENSGALG00000009906 7717 1.637 - - 0.910 - - - 0.727 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
32. LBR 6686 1.625 - - 0.881 - - - - 0.744 - - lamin B receptor, transcript variant X4
33. PIGK ENSGALG00000009015 7942 1.624 - - 0.886 - - - 0.738 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
34. LXR LXR 2599 1.624 - - 0.909 - - - - 0.715 - -
35. DHFR ENSGALG00000026757 18478 1.602 - - 0.863 - - - - - - 0.739 dihydrofolate reductase [Source:NCBI gene;Acc:427317]
36. BMS1 ENSGALG00000002624 8339 1.598 - - 0.830 - - - 0.768 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
37. ACOX1 ENSGALG00000002159 2953 1.598 - - 0.895 - - - - - - 0.703 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
38. NDUFC2 ENSGALG00000029172 26136 1.594 - - 0.872 - - - 0.722 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
39. GABARAPL2 ENSGALG00000003208 9195 1.59 - - 0.816 - - - 0.774 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
40. PSMD13 ENSGALG00000043684 14720 1.588 - - 0.809 - - - - 0.779 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
41. GTF2H3 ENSGALG00000023682 9914 1.588 - - 0.824 - - - 0.764 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
42. TAF1D ENSGALG00000017220 3012 1.585 - - 0.756 - - - - - 0.829 - TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
43. SFXN4 ENSGALG00000009350 3899 1.582 - - 0.818 - - - - 0.764 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
44. MED17 ENSGALG00000017218 5821 1.581 - - - - - - 0.770 - 0.811 - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
45. AHSA1 ENSGALG00000010463 15252 1.579 - - 0.748 - - - 0.831 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
46. POMP ENSGALG00000017090 5504 1.567 - - 0.811 - - - - 0.756 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
47. WSB2 ENSGALG00000008151 13246 1.567 - - 0.815 - - - 0.752 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
48. DDX42 ENSGALG00000000581 8780 1.566 - - 0.866 - - - - 0.700 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
49. NUPL1 NUPL1 8197 1.565 - - 0.857 - - - 0.708 - - -
50. ORC3 ENSGALG00000015800 4316 1.561 - - 0.783 - - - - - - 0.778 origin recognition complex subunit 3 [Source:NCBI gene;Acc:421822]
51. AAMP ENSGALG00000011445 2528 1.557 - - 0.841 - - - - - 0.716 - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
52. ZNRF1 ENSGALG00000029017 1429 1.557 - - 0.828 - - - - - 0.729 - zinc and ring finger 1 [Source:HGNC Symbol;Acc:HGNC:18452]
53. TPM4 ENSGALG00000002563 15621 1.552 - - 0.738 - - - - - 0.814 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
54. TPRG1L ENSGALG00000001024 9809 1.55 - - - - - - 0.741 - 0.809 - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
55. COX17 ENSGALG00000014981 5646 1.548 - - - - - - 0.805 - 0.743 - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
56. STRN3 ENSGALG00000040464 9045 1.548 - - - - - - - 0.807 0.741 - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
57. TMEM167A ENSGALG00000027332 13862 1.548 - - 0.820 - - - 0.728 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
58. AKAP1 ENSGALG00000005575 12051 1.542 - - 0.772 - - - 0.770 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
59. CRIPT ENSGALG00000010014 4311 1.542 - - - - - - - 0.792 0.750 - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
60. PIK3IP1 ENSGALG00000006942 8388 1.535 - - 0.742 - - - 0.793 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
61. ASAH1 ENSGALG00000026364 2783 1.534 - - - - - - 0.759 - 0.775 - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
62. HSPA4 ENSGALG00000040882 20966 1.533 - - 0.708 - - - 0.825 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
63. CDT1 ENSGALG00000013784 6801 1.533 - - 0.808 - - - 0.725 - - - chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]
64. C1orf21 ENSGALG00000020922 4035 1.523 - - 0.791 - - - 0.732 - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
65. RIT1 ENSGALG00000014647 7174 1.52 - - - - - - - 0.755 0.765 - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
66. BRF1 ENSGALG00000011705 3406 1.518 - - 0.807 - - - 0.711 - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
67. NAB1 ENSGALG00000037778 3467 1.516 - - 0.808 - - - - - 0.708 - NGFI-A binding protein 1 [Source:NCBI gene;Acc:374126]
68. CCNC ENSGALG00000015471 6497 1.511 - - - - - - 0.749 - 0.762 - cyclin C [Source:NCBI gene;Acc:421791]
69. SPCS1 ENSGALG00000001655 7718 1.511 - - 0.802 - - - 0.709 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
70. CHN1 ENSGALG00000009293 6415 1.498 - - 0.784 - - - 0.714 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
71. BPGM ENSGALG00000013069 4520 1.497 - - 0.789 - - - 0.708 - - - bisphosphoglycerate mutase [Source:NCBI gene;Acc:418172]
72. DCUN1D1 ENSGALG00000008807 6545 1.497 - - 0.752 - - - 0.745 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
73. MKRN1 ENSGALG00000012852 6907 1.494 - - - - - - - 0.701 0.793 - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
74. NAA20 ENSGALG00000012587 11349 1.491 - - - - - - 0.718 - 0.773 - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
75. BNIP3L ENSGALG00000043405 10316 1.491 - - 0.765 - - - 0.726 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
76. RANBP9 ENSGALG00000012696 4871 1.49 - - - - - - 0.749 0.741 - - RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]
77. HCCS ENSGALG00000005571 4939 1.483 - - 0.732 - - - 0.751 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
78. COX11 ENSGALG00000027190 4475 1.478 - - - - - - - 0.737 0.741 - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
79. CBLL1 ENSGALG00000038981 6725 1.477 - - 0.753 - - - 0.724 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
80. ZNHIT3 ENSGALG00000026031 8652 1.473 - - 0.727 - - - 0.746 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
81. CCNG2 ENSGALG00000010347 9122 1.473 - - - - - - 0.719 0.754 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
82. KPNA6 ENSGALG00000003383 6937 1.467 - - - - - - - 0.709 0.758 - karyopherin subunit alpha 6 [Source:NCBI gene;Acc:419656]
83. KTN1 ENSGALG00000012137 4058 1.462 - - - - - - 0.723 - 0.739 - kinectin 1 [Source:NCBI gene;Acc:396335]
84. MRPS30 ENSGALG00000014874 3416 1.457 - - - - - - 0.716 - 0.741 - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
85. MPPED1 ENSGALG00000014186 5726 1.457 - - - - - - 0.756 - - 0.701 metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
86. NAF1 ENSGALG00000009496 2003 1.454 - - - - - - - 0.739 0.715 - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
87. GID8 ENSGALG00000005700 3992 1.452 - - 0.738 - - - 0.714 - - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
88. FAM63B 3793 1.451 - - - - - - 0.703 - - 0.748 family with sequence similarity 63 member B
89. AKT1 ENSGALG00000011620 4089 1.451 - - - - - - 0.739 - 0.712 - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
90. CHRAC1 ENSGALG00000040823 5695 1.448 - - - - - - 0.701 0.747 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
91. PTTG1 17936 1.444 - - 0.744 - - - 0.700 - - - pituitary tumor-transforming 1, transcript variant X1
92. NPM1 ENSGALG00000002197 24109 1.441 - - 0.724 - - - - - 0.717 - nucleophosmin [Source:NCBI gene;Acc:396203]
93. TATDN1 ENSGALG00000041072 1585 1.438 - - - - - - - - 0.706 0.732 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
94. TMEM68 ENSGALG00000031835 1691 1.436 - - - - - - 0.735 0.701 - - transmembrane protein 68 [Source:NCBI gene;Acc:421124]
95. MRPL47 ENSGALG00000013759 9044 1.429 - - - - - - 0.704 0.725 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
96. DAD1 ENSGALG00000035626 32604 1.427 - - - - - - 0.708 0.719 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
97. KIAA1671 ENSGALG00000005512 2540 1.427 - - - - - - 0.705 - - 0.722 KIAA1671 [Source:NCBI gene;Acc:768701]
98. GPC1 ENSGALG00000040316 13364 1.424 - - 0.711 - - - - 0.713 - - glypican 1 [Source:NCBI gene;Acc:424770]
99. HERC2 ENSGALG00000016739 9900 1.423 - - - 0.705 - - 0.718 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
100. LSM1 ENSGALG00000003245 4701 1.422 - - 0.716 - - - 0.706 - - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]

There are 1182 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA