Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MIB1

Gene Name Gene ID Reads Annotation
MIB1 ENSDARG00000102184 3285 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]










Genes with expression patterns similar to MIB1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MIB1 ENSDARG00000102184 3285 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
2. SPIN4_1 SPIN4_1 2562 2.547 - - 0.717 - - 0.998 - - 0.832
3. tmem59l ENSDARG00000003655 1536 2.341 - 0.770 - - - - 0.701 - 0.870 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
4. gipc1 ENSDARG00000104483 2913 2.297 0.711 0.799 - - - - 0.787 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
5. msi1 ENSDARG00000010710 2634 2.27 - - 0.762 - - - - 0.775 0.733 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
6. FRG1 ENSDARG00000056504 1196 1.843 - - - - - 0.996 - - 0.847 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
7. kank2 ENSDARG00000018393 1804 1.807 - - - - - 0.996 - - 0.811 KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
8. icln icln 1279 1.782 - - - - - 0.996 0.786 - -
9. hm13 ENSDARG00000037846 5019 1.764 - 0.768 - - - 0.996 - - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
10. CABZ01028296.1 CABZ01028296.1 6203 1.737 - - - - - 0.997 - - 0.740
11. rbpms2b ENSDARG00000079578 436 1.732 - 0.834 - - - - - - 0.898 RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
12. hnrnpk ENSDARG00000018914 8841 1.727 - - - - - 0.975 0.752 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
13. nudt3a ENSDARG00000016256 2713 1.725 - 0.729 - - - 0.996 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
14. smg6 ENSDARG00000100481 493 1.717 - 0.842 - - - - - - 0.875 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
15. cpsf6 ENSDARG00000018618 3923 1.715 - - - - - 0.996 0.719 - - cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
16. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.71 - - - - - 0.991 - 0.719 - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
17. sox3 ENSDARG00000053569 12016 1.702 - - 0.743 - - 0.959 - - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
18. ebf3 ebf3 4238 1.693 - - 0.701 - - 0.992 - - -
19. polr1d ENSDARG00000037570 860 1.682 - 0.771 - - - - - - 0.911 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
20. lysmd3 ENSDARG00000024693 754 1.679 - 0.815 - - - - - - 0.864 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
21. rab11fip3 ENSDARG00000016490 661 1.673 - 0.777 - - - - - - 0.896 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
22. NUMA1_2 NUMA1_2 2897 1.669 - - - 0.764 - - - - 0.905
23. adipor1a ENSDARG00000002912, ENSDARG00000113136 796 1.668 - 0.791 - - - - - - 0.877 adiponectin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-169]
24. AKT3 AKT3 1729 1.664 - - - - - - - 0.804 0.860
25. hoxd4a ENSDARG00000059276 1516 1.646 - 0.835 - - - - 0.811 - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
26. CCDC106 CCDC106 1908 1.636 - - 0.734 - - - - - 0.902
27. supt16h ENSDARG00000079949 4755 1.623 - 0.736 - - - - - - 0.887 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
28. mex3b ENSDARG00000058369 1867 1.621 - - - - - - - 0.753 0.868 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
29. eef2a.1 ENSDARG00000042094 1781 1.62 - - - - - - 0.724 - 0.896 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
30. gatad2ab ENSDARG00000006192 2461 1.615 - - - - - - 0.816 - 0.799 GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
31. pes ENSDARG00000018902 3286 1.604 - 0.728 - - - - - - 0.876 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
32. gse1 ENSDARG00000062020 2337 1.602 - - - - - - 0.764 - 0.838 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
33. cd99l2 ENSDARG00000056722 5036 1.595 - - - - - - 0.742 - 0.853 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
34. slkb ENSDARG00000012574 1099 1.591 - - - - - - 0.819 0.772 - STE20-like kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-1684]
35. CFP ENSDARG00000094451 852 1.589 - 0.734 - - - - - - 0.855 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
36. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.587 - 0.809 - - - - 0.778 - - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
37. PROSER1 ENSDARG00000086302 1935 1.584 - - - - - - 0.767 - 0.817 proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
38. znf207a ENSDARG00000015538 2630 1.574 - - - - - - - 0.794 0.780 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
39. CASK CASK 1750 1.566 0.768 - - - - - - - 0.798
40. pfkfb4 pfkfb4 194 1.565 - 0.831 - - - - 0.734 - -
41. psmc3 ENSDARG00000007141 5592 1.565 - - - - - - 0.730 - 0.835 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
42. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 1.562 - - - - 0.705 - - - 0.857 LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
43. sumo3b ENSDARG00000035993 3414 1.561 - - 0.738 - - - - - 0.823 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
44. ccdc85ca ENSDARG00000005232 3218 1.558 - - - - - - 0.826 0.732 - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
45. tmem248 ENSDARG00000018825 1560 1.557 - 0.756 - - - - - - 0.801 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
46. wash wash 172 1.557 0.724 0.833 - - - - - - -
47. bzw2 ENSDARG00000035918 1502 1.557 0.705 - - - - 0.852 - - - basic leucine zipper and W2 domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-746]
48. xpr1 xpr1 840 1.555 - - - - - - - 0.737 0.818
49. zgc:63637 zgc:63637 3636 1.554 - - - - - - 0.781 - 0.773
50. cops5 ENSDARG00000057624 1485 1.551 0.794 0.757 - - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
51. cbll1 ENSDARG00000015222 995 1.551 - 0.730 - - - - 0.821 - - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
52. hdac4 ENSDARG00000098349 1370 1.544 - 0.709 - - - - - - 0.835 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
53. cars ENSDARG00000036164 2019 1.543 - - - - - - 0.717 - 0.826 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
54. cwc22 ENSDARG00000014008 2385 1.542 - 0.702 - - - - - - 0.840 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
55. hn1b hn1b 7325 1.54 - - - - - - 0.796 0.744 -
56. fndc3bb ENSDARG00000062023 1502 1.534 - 0.751 - - - 0.783 - - - fibronectin type III domain containing 3Bb [Source:ZFIN;Acc:ZDB-GENE-070510-2]
57. JHDM1D JHDM1D 2277 1.534 - - 0.756 - - - - - 0.778
58. BX511013.1 ENSDARG00000112403 1018 1.533 - 0.727 - - - - - - 0.806 uncharacterized LOC103908633 [Source:NCBI gene;Acc:103908633]
59. suv420h1 1810 1.529 - 0.730 - - - - - - 0.799 suppressor of variegation 4-20 homolog 1 (Drosophila)
60. dvl3a ENSDARG00000015707 1132 1.527 - 0.728 - - - - - - 0.799 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
61. parp1 ENSDARG00000019529 6787 1.52 - - 0.769 - 0.751 - - - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
62. C24H17orf96 C24H17orf96 1538 1.518 - 0.739 - - - - - 0.779 -
63. tmem2 2572 1.518 - - - - - - 0.765 - 0.753 transmembrane protein 2, transcript variant X1
64. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.518 - - - - - - 0.704 - 0.814 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
65. npas3b npas3b 1446 1.517 - - 0.757 - - - - - 0.760
66. mrpl3 ENSDARG00000103318 2308 1.513 - - - - - - - 0.705 0.808 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
67. polr3glb ENSDARG00000013734 1199 1.509 - - 0.742 - - - 0.767 - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
68. smarcd1 ENSDARG00000019004 6028 1.507 - - - - 0.736 - 0.771 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
69. anp32e ENSDARG00000054804 11017 1.504 - - - - - 0.784 0.720 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
70. atp2a2b ENSDARG00000005122 2228 1.5 - - - - - - 0.787 0.713 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2b [Source:ZFIN;Acc:ZDB-GENE-030131-867]
71. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.49 - - - - - - 0.701 - 0.789 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
72. zgc:77262 ENSDARG00000044545 5563 1.489 - - 0.776 - - - 0.713 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
73. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.483 - - - - - - 0.747 - 0.736 sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
74. arnt2 ENSDARG00000103697 5731 1.483 - - 0.757 - - - 0.726 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
75. chtopa ENSDARG00000057234 3287 1.481 - 0.748 - - - - 0.733 - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
76. map1lc3b ENSDARG00000101127 3958 1.478 - - - - - - 0.777 - 0.701 microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
77. b4galt6 ENSDARG00000010301 2005 1.477 - 0.704 - - - - - - 0.773 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
78. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.477 0.740 0.737 - - - - - - -
79. supt6h ENSDARG00000006524 3221 1.473 - 0.729 - - - - - - 0.744 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
80. chek1 ENSDARG00000104765 1029 1.47 - - 0.707 - - - 0.763 - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
81. prmt1 ENSDARG00000010246 11311 1.467 - 0.747 0.720 - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
82. puf60a ENSDARG00000032175 5618 1.466 - 0.746 0.720 - - - - - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
83. plagx ENSDARG00000036855 3768 1.466 - - 0.759 - - - - - 0.707 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
84. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.46 - - 0.721 - - - - 0.739 - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
85. zgc:66475 ENSDARG00000099519 1348 1.457 - 0.756 - - 0.701 - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
86. CU928083.1 ENSDARG00000097907 1279 1.456 - 0.747 - - - - 0.709 - -
87. ncalda ENSDARG00000070688 5069 1.454 - - - - - - 0.705 - 0.749 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
88. smc1al ENSDARG00000058203 8838 1.452 0.738 - 0.714 - - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
89. snx5 ENSDARG00000020442 2463 1.45 - 0.713 - - - - - - 0.737 sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
90. snrnp70 ENSDARG00000077126 5921 1.43 - - 0.713 - - - - - 0.717 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
91. twistnb ENSDARG00000024416 1077 1.42 - 0.711 - - - - - 0.709 - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
92. ddx42 ENSDARG00000037928 1659 1.409 0.706 - - - - - 0.703 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
93. nhsl1b ENSDARG00000042627 3697 0.998 - - - - - 0.998 - - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
94. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 0.998 - - - - - 0.998 - - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
95. thoc1 ENSDARG00000088246 1718 0.997 - - - - - 0.997 - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
96. fam50a ENSDARG00000024895 3020 0.997 - - - - - 0.997 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
97. ppm1la ENSDARG00000063218 2142 0.997 - - - - - 0.997 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
98. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 0.997 - - - - - 0.997 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
99. zcchc7 ENSDARG00000055443 2159 0.997 - - - - - 0.997 - - - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
100. pfkpa ENSDARG00000028000 1206 0.997 - - - - - 0.997 - - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]

There are 1222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA