Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MESDC1

Gene Name Gene ID Reads Annotation
MESDC1 1013 mesoderm development candidate 1











Genes with expression patterns similar to MESDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MESDC1 1013 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mesoderm development candidate 1
2. OMA1 ENSGALG00000010861 3328 1.609 - - - - - - 0.790 0.819 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
3. TOP3B ENSGALG00000030051 5953 1.565 - - - - - - 0.863 0.702 - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
4. FEN1 ENSGALG00000033781 16551 1.524 - - - - - - 0.730 0.794 - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
5. ITGB5 ENSGALG00000029766 5978 0.994 - - - - - - - 0.994 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
6. GRB14 ENSGALG00000020703 42 0.985 - - - - - - 0.985 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
7. TCTE1 ENSGALG00000010165 65 0.984 - - - - - - 0.984 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
8. ENSGALG00000026925 ENSGALG00000026925 119 0.984 - - - - - - 0.984 - - -
9. HEMK1 ENSGALG00000002253 40 0.984 - - - - - - 0.984 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
10. METTL24 ENSGALG00000041120 60 0.984 - - - - - - 0.984 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
11. SCUBE1 ENSGALG00000014178 91 0.984 - - - - - - 0.984 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
12. PTN ENSGALG00000040493 864 0.983 - - - - - - 0.983 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
13. ENSGALG00000003619 ENSGALG00000003619 58 0.983 - - - - - - 0.983 - - -
14. MXRA5 ENSGALG00000016635 352 0.983 - - - - - - 0.983 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
15. FAM183A 242 0.982 - - - - - - 0.982 - - - family with sequence similarity 183 member A, transcript variant 2
16. ENSGALG00000016099 ENSGALG00000016099 138 0.981 - - - - - - 0.981 - - -
17. NSRP1 ENSGALG00000004186 1683 0.98 - - - - - - 0.980 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
18. SNORA31 SNORA31 183 0.98 - - - - - - 0.980 - - -
19. ENTPD8L ENSGALG00000008936 731 0.979 - - - - - - 0.979 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
20. HESX1 ENSGALG00000005506 203 0.978 - - - - - - 0.978 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
21. DNAJC16 ENSGALG00000032832 750 0.976 - - - - - - 0.976 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
22. WDSUB1 ENSGALG00000012574 2038 0.975 - - - - - - 0.975 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
23. ENSGALG00000013233 ENSGALG00000013233 3265 0.974 - - - - - - 0.974 - - -
24. PIK3R3 ENSGALG00000010335 374 0.973 - - - - - - 0.973 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
25. UPK3BL ENSGALG00000001885 1650 0.969 - - - - - - 0.969 - - - uroplakin 3B-like
26. RAB1A ENSGALG00000031582 6929 0.967 - - - - - - 0.967 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
27. MTCH2 ENSGALG00000036196 15097 0.967 - - - - - - - 0.967 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
28. GAS6 ENSGALG00000016820 481 0.962 - - - - - - 0.962 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
29. PLCE1 ENSGALG00000039528 151 0.962 - - - - - - 0.962 - - - phospholipase C epsilon 1
30. CEP290 ENSGALG00000011177 1559 0.961 - - - - - - 0.961 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
31. CPSF2 ENSGALG00000010783 5236 0.961 - - - - - - - 0.961 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
32. SLC25A21 ENSGALG00000010117 536 0.958 - - - - - - 0.958 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
33. TM2D3 ENSGALG00000026271 2566 0.956 - - - - - - 0.956 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
34. C14orf80 C14orf80 1921 0.955 - - - - - - 0.955 - - -
35. MST1 ENSGALG00000002722 994 0.955 - - - - - - 0.955 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
36. NUP205 ENSGALG00000011662 4157 0.954 - - - - - - 0.954 - - - nucleoporin 205
37. SDK2 ENSGALG00000031895 2682 0.953 - - - - - - 0.953 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
38. LFNG ENSGALG00000038515 5178 0.953 - - - - - - 0.953 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
39. SGSM3 ENSGALG00000012033 1839 0.953 - - - - - - 0.953 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
40. FAM57A ENSGALG00000004820 1492 0.951 - - - - - - 0.951 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
41. UBE3B ENSGALG00000013851 1672 0.951 - - - - - - 0.951 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
42. MBNL2 ENSGALG00000016890 3162 0.95 - - - - - - 0.950 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
43. NCAPG2 ENSGALG00000006525 2319 0.949 - - - - - - 0.949 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
44. SCAF4 ENSGALG00000033965 2027 0.948 - - - - - - 0.948 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
45. PKN3 532 0.947 - - - - - - 0.947 - - - protein kinase N3, transcript variant X2
46. ENSGALG00000028164 ENSGALG00000028164 3325 0.947 - - - - - - 0.947 - - -
47. ZFYVE19 ENSGALG00000008460 2750 0.946 - - - - - - 0.946 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
48. TM9SF4 ENSGALG00000006568 567 0.946 - - - - - - 0.946 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
49. ASB6 ENSGALG00000004378 1080 0.944 - - - - - - 0.944 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
50. TUBA4A ENSGALG00000000433 1367 0.944 - - - - - - 0.944 - - - tubulin alpha 4a
51. XPO7 ENSGALG00000001838 1875 0.943 - - - - - - 0.943 - - - exportin 7 [Source:NCBI gene;Acc:426925]
52. KANK4 ENSGALG00000010953 726 0.942 - - - - - - 0.942 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
53. ZNF142 ENSGALG00000011393 2078 0.942 - - - - - - 0.942 - - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
54. TPR ENSGALG00000005105 2924 0.941 - - - - - - 0.941 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
55. NDUFV3 ENSGALG00000022813 4456 0.941 - - - - - - 0.941 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
56. CCNE2 ENSGALG00000040794 1229 0.937 - - - - - - 0.937 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
57. SUGP1 ENSGALG00000042132 2771 0.935 - - - - - - 0.935 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
58. FAM193A ENSGALG00000015667 3075 0.935 - - - - - - 0.935 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
59. SPG11 ENSGALG00000008180 1890 0.935 - - - - - - 0.935 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
60. BPHL ENSGALG00000029659 501 0.932 - - - - - - 0.932 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
61. PARD3B ENSGALG00000042645 2893 0.932 - - - - - - 0.932 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
62. JMJD7 ENSGALG00000026846 1320 0.931 - - - - - - 0.931 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
63. MGLL ENSGALG00000032736 612 0.931 - - - - - - 0.931 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
64. ATM ENSGALG00000017159 893 0.93 - - - - - - 0.930 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
65. SPAG9 ENSGALG00000034001 2314 0.93 - - - - - - 0.930 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
66. NT5C2 ENSGALG00000008179 1760 0.93 - - - - - - 0.930 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
67. CCNL1 ENSGALG00000009699 1033 0.93 - - - - - - 0.930 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
68. PGAP2 ENSGALG00000027762 2583 0.929 - - - - - - 0.929 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
69. NIN ENSGALG00000012361 2284 0.928 - - - - - - 0.928 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
70. MFAP3 ENSGALG00000004040 6951 0.928 - - - - - - - 0.928 - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
71. USP54 ENSGALG00000005232 2749 0.926 - - - - - - 0.926 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
72. ERMP1 ENSGALG00000000438 1136 0.923 - - - - - - 0.923 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
73. CRMP1B CRMP1B 18633 0.922 - - - - - - - 0.922 - -
74. SRPK1 ENSGALG00000037546 1849 0.921 - - - - - - 0.921 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
75. RNF20 ENSGALG00000015548 7199 0.918 - - - - - - 0.918 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
76. FTSJ2 FTSJ2 2951 0.916 - - - - - - 0.916 - - -
77. DIEXF ENSGALG00000009887 4782 0.915 - - - - - - 0.915 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
78. WIPI1 ENSGALG00000004215 3359 0.913 - - - - - - 0.913 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
79. CAMK2D ENSGALG00000041635 3384 0.912 - - - - - - - 0.912 - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
80. ALDH18A1 ENSGALG00000034655 3038 0.91 - - - - - - 0.910 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
81. RPIA ENSGALG00000015960 2784 0.909 - - - - - - 0.909 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
82. MBTPS1 ENSGALG00000003293 4843 0.906 - - - - - - 0.906 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
83. ECHDC3 ENSGALG00000006690 1299 0.904 - - - - - - 0.904 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
84. RBL1 ENSGALG00000001332 2568 0.902 - - - - - - 0.902 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
85. ENSGALG00000002852 ENSGALG00000002852 2687 0.901 - - - - - - 0.901 - - -
86. MED16 ENSGALG00000001978 2387 0.9 - - - - - - 0.900 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
87. NSMCE4A ENSGALG00000009504 1302 0.899 - - - - - - 0.899 - - - NSE4 homolog A, SMC5-SMC6 complex component
88. ITSN1 ENSGALG00000036677 5727 0.899 - - - - - - 0.899 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
89. TAF8 ENSGALG00000003498 2071 0.898 - - - - - - 0.898 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
90. SUN1 ENSGALG00000003781 3442 0.897 - - - - - - 0.897 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
91. GPN3 ENSGALG00000003807 6320 0.895 - - - - - - 0.895 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
92. TMEM135 2283 0.895 - - - - - - 0.895 - - - transmembrane protein 135, transcript variant X4
93. MCEE ENSGALG00000003913 1527 0.895 - - - - - - 0.895 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
94. MPST ENSGALG00000040840 2122 0.893 - - - - - - 0.893 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
95. INTS7 ENSGALG00000009843 2395 0.89 - - - - - - 0.890 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
96. CDC42SE2 ENSGALG00000027258 4725 0.89 - - - - - - 0.890 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
97. SNRNP48 ENSGALG00000013005 1468 0.89 - - - - - - 0.890 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
98. NAT9 ENSGALG00000007723 2098 0.885 - - - - - - 0.885 - - - N-acetyltransferase 9 (putative), transcript variant X7
99. LIMCH1 ENSGALG00000014258 1987 0.885 - - - - - - 0.885 - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
100. MSL3 ENSGALG00000041433 2957 0.884 - - - - - - 0.884 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]

There are 244 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA