Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MED4

Gene Name Gene ID Reads Annotation
MED4 ENSGALG00000016995 3309 mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]











Genes with expression patterns similar to MED4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MED4 ENSGALG00000016995 3309 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
2. GPC3 ENSGALG00000006087 3744 2.299 - - - - - - 0.703 0.832 0.764 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
3. ZFR ENSGALG00000003235 8466 1.61 - - - - - - 0.776 0.834 - - zinc finger RNA binding protein, transcript variant X3
4. PPP2R5A ENSGALG00000009828 10309 1.589 - - - - - - 0.772 0.817 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
5. UBE2V2 ENSGALG00000028133 7044 1.581 - - - - - - 0.808 0.773 - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
6. ZYX ENSGALG00000014688 8686 1.561 - - - - - - 0.794 0.767 - - zyxin [Source:NCBI gene;Acc:418300]
7. RRAS2 ENSGALG00000005998 6467 1.552 - - - - - - 0.706 0.846 - - RAS related 2 [Source:NCBI gene;Acc:423062]
8. HIF1A ENSGALG00000011870 9768 1.525 - - - - - - 0.712 0.813 - - hypoxia inducible factor 1 subunit alpha [Source:NCBI gene;Acc:374177]
9. INTS6 ENSGALG00000017018 3083 1.524 - - - - - - 0.756 0.768 - - integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]
10. HYOU1 ENSGALG00000007659 3555 1.522 - - - - - - 0.737 0.785 - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
11. NEK4 ENSGALG00000041428 4473 1.51 - - - - - - 0.788 - 0.722 - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
12. C15ORF23 C15ORF23 14264 1.501 - - - - - - 0.736 0.765 - -
13. QDPR ENSGALG00000030070 6953 1.499 - - - - - - - 0.789 0.710 - quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
14. LYAR ENSGALG00000015000 10756 1.492 - - - - - - 0.741 0.751 - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
15. GSTA GSTA 3130 1.455 - - - - - - - 0.720 0.735 -
16. SF3A2 ENSGALG00000021679 12580 0.903 - - - - - - - 0.903 - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
17. TRAF7 ENSGALG00000005767 4615 0.893 - - - - - - - 0.893 - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
18. RPE ENSGALG00000002847 7644 0.883 - - - - - - 0.883 - - - ribulose-5-phosphate-3-epimerase, transcript variant X2
19. NAA16 ENSGALG00000032808 3366 0.871 - - - - - - 0.871 - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
20. gga-mir-7476 gga-mir-7476 20209 0.864 - - - - - - - 0.864 - -
21. SHROOM2 ENSGALG00000030802 4517 0.864 - - - - - - 0.864 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
22. SCAMP5 ENSGALG00000014116 8877 0.861 - - - - - - - 0.861 - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
23. PARN ENSGALG00000003091 6363 0.861 - - - - - - 0.861 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
24. CDC73 ENSGALG00000002469 4586 0.858 - - - - - - 0.858 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
25. TXNL1 ENSGALG00000033862 13899 0.857 - - - - - - - 0.857 - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
26. NR2C1 ENSGALG00000011327 5109 0.857 - - - - - - - 0.857 - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
27. SNX4 ENSGALG00000012052 11634 0.855 - - - - - - - 0.855 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
28. MYST2 MYST2 8078 0.854 - - - - - - - 0.854 - -
29. IK ENSGALG00000037172 12100 0.853 - - - - - - 0.853 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
30. BTAF1 ENSGALG00000030598 3556 0.851 - - - - - - - 0.851 - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
31. RIT1 ENSGALG00000014647 7174 0.848 - - - - - - 0.848 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
32. DNPEP ENSGALG00000011318 10623 0.847 - - - - - - 0.847 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
33. MYCL ENSGALG00000024047 10367 0.847 - - - - - - - 0.847 - - MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
34. RNF8 ENSGALG00000023256 5495 0.846 - - - - - - - 0.846 - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
35. METTL16 ENSGALG00000014901 3720 0.842 - - - - - - - 0.842 - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
36. FUBP3 ENSGALG00000003941 12667 0.841 - - - - - - - 0.841 - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
37. RPS19BP1 ENSGALG00000029810 5768 0.841 - - - - - - 0.841 - - - ribosomal protein S19 binding protein 1 [Source:NCBI gene;Acc:418011]
38. EIF2B2 ENSGALG00000010301 10772 0.839 - - - - - - - 0.839 - - eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
39. SEC24C ENSGALG00000005181 11132 0.837 - - - - - - - 0.837 - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
40. MAPKAPK2 ENSGALG00000000883 6174 0.836 - - - - - - - 0.836 - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
41. ALDH5A1 ENSGALG00000032544 4924 0.835 - - - - - - 0.835 - - - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
42. CHCHD1 ENSGALG00000028809 9955 0.835 - - - - - - - 0.835 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
43. PSMD7 ENSGALG00000000707 26350 0.832 - - - - - - - 0.832 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
44. ABHD17A ENSGALG00000041163 5578 0.832 - - - - - - 0.832 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
45. HTATSF1 ENSGALG00000006410 3526 0.832 - - - - - - 0.832 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
46. LONP1 ENSGALG00000040492 7133 0.831 - - - - - - 0.831 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
47. TMLHE ENSGALG00000007443 3619 0.831 - - - - - - - 0.831 - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
48. AKAP9 ENSGALG00000040724 7446 0.83 - - - - - - - 0.830 - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
49. FBXO3 ENSGALG00000034029 15089 0.83 - - - - - - - 0.830 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
50. SLC30A4 ENSGALG00000005703 5696 0.829 - - - - - - 0.829 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
51. MCM3 ENSGALG00000016676 16934 0.828 - - - - - - - 0.828 - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
52. QTRTD1 QTRTD1 10765 0.828 - - - - - - - 0.828 - -
53. SF3A1 ENSGALG00000007937 11716 0.827 - - - - - - - 0.827 - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
54. PAPD7 ENSGALG00000013061 2031 0.827 - - - - - - 0.827 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
55. ABHD17C ENSGALG00000006420 2220 0.824 - - - - - - 0.824 - - - abhydrolase domain containing 17C [Source:NCBI gene;Acc:415479]
56. SACS ENSGALG00000017120 4906 0.824 - - - - - - - 0.824 - - sacsin molecular chaperone [Source:HGNC Symbol;Acc:HGNC:10519]
57. UBE2E1 ENSGALG00000011286 5483 0.823 - - - - - - 0.823 - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
58. SRSF6 ENSGALG00000000990 12424 0.823 - - - - - - 0.823 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
59. PARL ENSGALG00000002315 15943 0.823 - - - - - - 0.823 - - - presenilin associated rhomboid like
60. EIF1AY ENSGALG00000016410 6431 0.821 - - - - - - 0.821 - - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
61. CDC42SE2 ENSGALG00000027258 4725 0.821 - - - - - - 0.821 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
62. OPA1 ENSGALG00000007150 5488 0.821 - - - - - - - 0.821 - - OPA1, mitochondrial dynamin like GTPase [Source:NCBI gene;Acc:424900]
63. ADAT2 ENSGALG00000019976 4169 0.821 - - - - - - - 0.821 - - adenosine deaminase, tRNA specific 2
64. MOSPD1 ENSGALG00000006132 8503 0.818 - - - - - - 0.818 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
65. CEP70 ENSGALG00000012087 7992 0.817 - - - - - - 0.817 - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
66. AGFG1 ENSGALG00000003052 4766 0.817 - - - - - - - 0.817 - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
67. SEPSECS ENSGALG00000014386 2611 0.817 - - - - - - - 0.817 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:NCBI gene;Acc:422808]
68. MTDH ENSGALG00000034050 9525 0.816 - - - - - - 0.816 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
69. BMI1 ENSGALG00000041267 6618 0.816 - - - - - - 0.816 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
70. RANBP10 ENSGALG00000001439 4003 0.815 - - - - - - - 0.815 - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
71. FBXW2 ENSGALG00000000864 2995 0.815 - - - - - - - 0.815 - - F-box and WD repeat domain containing 2 [Source:NCBI gene;Acc:417088]
72. SBNO1 ENSGALG00000003392 6731 0.813 - - - - - - 0.813 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
73. SRP68 ENSGALG00000002062 7370 0.813 - - - - - - - 0.813 - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
74. COIL ENSGALG00000003158 7806 0.812 - - - - - - 0.812 - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
75. CYB5R3 ENSGALG00000014122 7664 0.811 - - - - - - 0.811 - - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
76. ALDH7A1 ENSGALG00000008229 5891 0.811 - - - - - - - 0.811 - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
77. DPYSL3 ENSGALG00000007582 7743 0.81 - - - - - - 0.810 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
78. ARPC1A ENSGALG00000004693 11583 0.81 - - - - - - 0.810 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
79. SUV39H2 ENSGALG00000013920 4360 0.81 - - - - - - 0.810 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
80. CCNK ENSGALG00000011138 6416 0.81 - - - - - - 0.810 - - - cyclin K [Source:NCBI gene;Acc:423446]
81. C7orf50 ENSGALG00000004055 5786 0.81 - - - - - - - 0.810 - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
82. NPHP4 ENSGALG00000000966 1698 0.809 - - - - - - 0.809 - - - nephrocystin 4, transcript variant X5
83. DTYMK ENSGALG00000006305 11736 0.809 - - - - - - 0.809 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
84. CCDC101 CCDC101 9111 0.809 - - - - - - 0.809 - - -
85. THOP1 ENSGALG00000041934 10122 0.808 - - - - - - - 0.808 - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
86. MRPL53 ENSGALG00000037867 6100 0.808 - - - - - - - 0.808 - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
87. ELL ENSGALG00000033513 6536 0.806 - - - - - - - 0.806 - - elongation factor for RNA polymerase II [Source:NCBI gene;Acc:420124]
88. FNDC3AL ENSGALG00000004169 4980 0.805 - - - - - - - 0.805 - - fibronectin type III domain containing 3A-like, transcript variant X3
89. EIF2D ENSGALG00000000856 8348 0.805 - - - - - - 0.805 - - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
90. Sep-09 Sep-09 4723 0.804 - - - - - - 0.804 - - -
91. SLC35B1 ENSGALG00000035057 10683 0.804 - - - - - - - 0.804 - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
92. AP4E1 2726 0.803 - - - - - - - 0.803 - - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
93. C6orf211 C6orf211 2644 0.802 - - - - - - - 0.802 - -
94. EAPP ENSGALG00000010007 5080 0.801 - - - - - - - 0.801 - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
95. PSMD6 ENSGALG00000007315 3906 0.801 - - - - - - - 0.801 - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
96. ENSGALG00000007035 ENSGALG00000007035 8473 0.801 - - - - - - - 0.801 - -
97. TXN2 ENSGALG00000012532 12518 0.8 - - - - - - - 0.800 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
98. CPOX ENSGALG00000015240 5292 0.8 - - - - - - 0.800 - - - coproporphyrinogen oxidase
99. KIAA2026 ENSGALG00000015050 4659 0.798 - - - - - - 0.798 - - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
100. SALL4 ENSGALG00000041365 6760 0.798 - - - - - - - 0.798 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]

There are 306 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA