Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MED28

Gene Name Gene ID Reads Annotation
MED28 ENSGALG00000007138 7686 mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]











Genes with expression patterns similar to MED28

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MED28 ENSGALG00000007138 7686 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
2. RUVBL1 ENSGALG00000005931 9379 1.675 - - - - - - 0.741 0.934 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
3. ERGIC2 ENSGALG00000007183 12870 1.603 - - - - - - 0.806 0.797 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
4. NDUFAF1 ENSGALG00000008587 14779 1.595 - - - - - - 0.759 0.836 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
5. CHMP6 ENSGALG00000026428 18026 1.59 - - - - - - 0.764 0.826 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
6. KHDRBS1 ENSGALG00000003272 4249 1.589 - - - - - - 0.791 0.798 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
7. UBE2D1 ENSGALG00000021213 5876 1.589 - - - - - - 0.799 0.790 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
8. ZC3H3 ENSGALG00000043265 1638 1.581 - - - - - - 0.775 0.806 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
9. CHMP3 ENSGALG00000015805 11581 1.576 - - - - - - 0.754 0.822 - - charged multivesicular body protein 3
10. SMIM12 ENSGALG00000030261 5860 1.567 - - - - - - 0.753 0.814 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
11. TMEM59 ENSGALG00000010746 4669 1.566 - - - - - - 0.754 0.812 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
12. MARC1 ENSGALG00000009453 5675 1.548 - - - - - - 0.790 0.758 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
13. TSC22D2 ENSGALG00000027591 6594 1.543 - - - - - - 0.748 0.795 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
14. GTF2A2 ENSGALG00000003793 5957 1.542 - - - - - - 0.807 0.735 - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
15. HNRNPD ENSGALG00000011184 10686 1.532 - - - - - - 0.820 0.712 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
16. AHCTF1 ENSGALG00000010630 4809 1.53 - - - - - - 0.722 0.808 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
17. SMDT1 ENSGALG00000011897 9360 1.526 - - - - - - 0.734 0.792 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
18. PPCS ENSGALG00000004882 5759 1.519 - - - - - - 0.713 0.806 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
19. NDUFB3 ENSGALG00000008239 15511 1.511 - - - - - - 0.701 0.810 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
20. TRMT44 ENSGALG00000015594 1490 1.509 - - - - - - 0.712 0.797 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
21. SCO1 ENSGALG00000030475 7304 1.495 - - - - - - 0.704 0.791 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
22. TBL1XR1 ENSGALG00000039182 16983 1.483 - - - - - - 0.721 0.762 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
23. MRPL20 ENSGALG00000001542 28764 1.48 - - - - - - 0.762 0.718 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
24. GRPEL1 ENSGALG00000015549 11246 0.907 - - - - - - 0.907 - - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
25. GMPS ENSGALG00000010284 8765 0.898 - - - - - - - 0.898 - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
26. LSM6 ENSGALG00000009985 18582 0.894 - - - - - - 0.894 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
27. CLPX ENSGALG00000007289 6348 0.886 - - - - - - - 0.886 - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
28. THAP5 ENSGALG00000009494 6540 0.881 - - - - - - 0.881 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
29. ZCCHC9 ENSGALG00000015603 3118 0.879 - - - - - - 0.879 - - - zinc finger CCHC-type containing 9 [Source:HGNC Symbol;Acc:HGNC:25424]
30. UBQLN4 ENSGALG00000042214 15829 0.879 - - - - - - 0.879 - - - ubiquilin 4 [Source:NCBI gene;Acc:426353]
31. CHP1 ENSGALG00000008569 6876 0.877 - - - - - - 0.877 - - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
32. USP45 ENSGALG00000015478 3101 0.875 - - - - - - 0.875 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
33. SENP6 ENSGALG00000015901 8013 0.874 - - - - - - 0.874 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
34. CYB5A ENSGALG00000013708 8287 0.874 - - - - - - 0.874 - - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
35. Sep-15 Sep-15 6935 0.872 - - - - - - - 0.872 - -
36. EMC8 ENSGALG00000005744 9422 0.868 - - - - - - 0.868 - - - ER membrane protein complex subunit 8
37. FAM193A ENSGALG00000015667 3075 0.866 - - - - - - - 0.866 - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
38. TAF1A ENSGALG00000009441 2431 0.866 - - - - - - 0.866 - - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
39. C4orf27 C4orf27 16724 0.863 - - - - - - 0.863 - - -
40. FBXO5 ENSGALG00000013607 6156 0.862 - - - - - - 0.862 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
41. UQCRH ENSGALG00000017380 55734 0.861 - - - - - - 0.861 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
42. GPR125 GPR125 2753 0.861 - - - - - - - 0.861 - -
43. RANBP10 ENSGALG00000001439 4003 0.859 - - - - - - 0.859 - - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
44. KIAA2026 ENSGALG00000015050 4659 0.857 - - - - - - - 0.857 - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
45. YWHAQ ENSGALG00000016433 3450 0.856 - - - - - - - 0.856 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
46. DUSP7 ENSGALG00000041650 1946 0.855 - - - - - - - 0.855 - - Gallus gallus dual specificity phosphatase 7 (DUSP7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318409]
47. TXNDC9 ENSGALG00000032090 6804 0.853 - - - - - - 0.853 - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
48. BAIAP2 ENSGALG00000042538 1365 0.853 - - - - - - - 0.853 - - BAI1 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:947]
49. TTC27 ENSGALG00000010538 9685 0.85 - - - - - - 0.850 - - - tetratricopeptide repeat domain 27 [Source:NCBI gene;Acc:421462]
50. PDHB ENSGALG00000029576 12254 0.85 - - - - - - 0.850 - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
51. RBM26 ENSGALG00000016910 13769 0.846 - - - - - - - 0.846 - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
52. ATG5 ENSGALG00000015387 7752 0.845 - - - - - - 0.845 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
53. CCNG1 ENSGALG00000001718 9873 0.843 - - - - - - - 0.843 - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
54. SNX17 ENSGALG00000032468 13519 0.843 - - - - - - - 0.843 - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
55. ESD ENSGALG00000016991 11289 0.842 - - - - - - 0.842 - - - esterase D [Source:NCBI gene;Acc:418856]
56. MLX ENSGALG00000003199 5286 0.841 - - - - - - 0.841 - - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
57. PIGK ENSGALG00000009015 7942 0.84 - - - - - - - 0.840 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
58. SIPA1L1 ENSGALG00000009381 4019 0.838 - - - - - - 0.838 - - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
59. RBM17 ENSGALG00000006332 12656 0.837 - - - - - - 0.837 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
60. BRP44 BRP44 17093 0.837 - - - - - - 0.837 - - -
61. ATG4C ENSGALG00000010985 6102 0.835 - - - - - - - 0.835 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
62. RANGAP1 ENSGALG00000011966 20170 0.834 - - - - - - 0.834 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
63. SETD9 ENSGALG00000014719 5081 0.833 - - - - - - 0.833 - - - SET domain containing 9, transcript variant X2
64. TMED2 ENSGALG00000003307 20704 0.833 - - - - - - 0.833 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
65. FOPNL ENSGALG00000006532 2922 0.832 - - - - - - 0.832 - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
66. CLTCL1 ENSGALG00000041760 9351 0.829 - - - - - - 0.829 - - - clathrin, heavy chain-like 1, transcript variant X6
67. RCOR3 ENSGALG00000009871 7022 0.828 - - - - - - 0.828 - - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
68. EBNA1BP2 ENSGALG00000009045 17453 0.827 - - - - - - 0.827 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
69. ATP6V0E2 ENSGALG00000020754 2648 0.826 - - - - - - 0.826 - - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
70. TCEA2 ENSGALG00000005976 9143 0.825 - - - - - - 0.825 - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
71. ZC3H13 ENSGALG00000016984 21043 0.825 - - - - - - 0.825 - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
72. POLE2 ENSGALG00000012237 9023 0.824 - - - - - - 0.824 - - - DNA polymerase epsilon 2, accessory subunit [Source:NCBI gene;Acc:423567]
73. WDR4 ENSGALG00000016187 1713 0.824 - - - - - - 0.824 - - - Gallus gallus WD repeat domain 4 (WDR4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321598]
74. CEP97 ENSGALG00000015342 1117 0.824 - - - - - - 0.824 - - - centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]
75. GATD3A ENSGALG00000016918 24760 0.823 - - - - - - 0.823 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
76. YWHAZ ENSGALG00000031387 84985 0.822 - - - - - - 0.822 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
77. PHF20L1 ENSGALG00000033205 7598 0.822 - - - - - - 0.822 - - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
78. UBE2R2 ENSGALG00000001668 9234 0.821 - - - - - - 0.821 - - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
79. HOXA9 ENSGALG00000028983 9298 0.819 - - - - - - 0.819 - - - homeobox A9 [Source:NCBI gene;Acc:396096]
80. RNF214 ENSGALG00000036993 3729 0.817 - - - - - - - 0.817 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
81. MAP3K7 ENSGALG00000015596 15164 0.817 - - - - - - 0.817 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
82. SRP72 ENSGALG00000011403 13666 0.816 - - - - - - - 0.816 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
83. TRIM24 ENSGALG00000012823 2725 0.816 - - - - - - - 0.816 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
84. CSNK2A2 ENSGALG00000031718 9296 0.816 - - - - - - 0.816 - - - casein kinase 2 alpha 2 [Source:NCBI gene;Acc:415626]
85. GLB1L2 ENSGALG00000001604 4057 0.816 - - - - - - 0.816 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
86. TIPARP ENSGALG00000010256 1825 0.815 - - - - - - 0.815 - - - TCDD inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:HGNC:23696]
87. LATS2 4776 0.815 - - - - - - - 0.815 - - large tumor suppressor kinase 2
88. STX7 ENSGALG00000034374 4695 0.814 - - - - - - 0.814 - - - syntaxin 7 [Source:NCBI gene;Acc:426930]
89. EFHD1 ENSGALG00000001428 2831 0.814 - - - - - - - 0.814 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
90. ARFRP1 ENSGALG00000006101 3743 0.814 - - - - - - - 0.814 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
91. TCEA1 ENSGALG00000015274 2706 0.813 - - - - - - - 0.813 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
92. RPS28 ENSGALG00000024398 244056 0.812 - - - - - - 0.812 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
93. CCNDBP1 ENSGALG00000004837 11520 0.812 - - - - - - 0.812 - - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
94. MRPS23 ENSGALG00000005559 10360 0.812 - - - - - - - 0.812 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
95. KDM4A ENSGALG00000010074 7219 0.811 - - - - - - - 0.811 - - lysine demethylase 4A
96. MRPL18 ENSGALG00000011625 7855 0.811 - - - - - - - 0.811 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
97. API5 ENSGALG00000037968 18265 0.811 - - - - - - 0.811 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
98. LIG3 ENSGALG00000002288 7198 0.811 - - - - - - - 0.811 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
99. MTERFD1 MTERFD1 3640 0.81 - - - - - - - 0.810 - -
100. TXNDC5 ENSGALG00000012784 4678 0.81 - - - - - - - 0.810 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]

There are 612 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA