Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MED13

Gene Name Gene ID Reads Annotation
MED13 ENSGALG00000005230 1504 mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]











Genes with expression patterns similar to MED13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MED13 ENSGALG00000005230 1504 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
2. SYS1 ENSGALG00000003929 4487 1.455 - - - - - - 0.716 0.739 - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
3. BPHL ENSGALG00000029659 501 1.437 - - - - - - 0.722 - 0.715 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
4. ENSGALG00000005870 ENSGALG00000005870 4343 1.43 - - - - - - 0.709 0.721 - -
5. RIT1 ENSGALG00000014647 7174 1.416 - - - - - - 0.702 0.714 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
6. SLC25A1 ENSGALG00000041760 4744 0.891 - - - - - - 0.891 - - - solute carrier family 25 member 1, transcript variant X2
7. BRD1 ENSGALG00000029379 6047 0.886 - - - - - - 0.886 - - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
8. HDX ENSGALG00000007041 179 0.873 - - - - - - - - 0.873 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
9. HAND1 ENSGALG00000035104 2351 0.868 - - - - - - - - 0.868 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
10. IFT81 ENSGALG00000003854 2534 0.864 - - - - - - - - 0.864 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
11. ANKIB1 ENSGALG00000031917 109 0.863 - - - - - - - - 0.863 - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]
12. TLCD1 ENSGALG00000003973 17569 0.863 - - - - - - 0.863 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
13. ATG4B ENSGALG00000006298 2288 0.856 - - - - - - 0.856 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
14. RIF1 ENSGALG00000012484 2248 0.856 - - - - - - - - 0.856 - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
15. RAB3IP ENSGALG00000009959 1652 0.855 - - - - - - 0.855 - - - RAB3A interacting protein, transcript variant X1
16. UCH-L1 UCH-L1 12697 0.855 - - - - - - 0.855 - - -
17. HELLS ENSGALG00000005451 7094 0.854 - - - - - - 0.854 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
18. VPS26A ENSGALG00000004174 9198 0.846 - - - - - - 0.846 - - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
19. LSM10 ENSGALG00000002127 2519 0.845 - - - - - - 0.845 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
20. SETX ENSGALG00000003661 701 0.845 - - - - - - - - 0.845 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
21. CYFIP1 ENSGALG00000016736 6701 0.844 - - - - - - 0.844 - - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
22. PMPCB ENSGALG00000008280 6357 0.844 - - - - - - 0.844 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
23. RNF207 2949 0.842 - - - - - - - - 0.842 - ring finger protein 207, transcript variant X1
24. GPN3 ENSGALG00000003807 6320 0.836 - - - - - - 0.836 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
25. NPB NPB 8056 0.832 - - - - - - 0.832 - - -
26. DIEXF ENSGALG00000009887 4782 0.831 - - - - - - 0.831 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
27. ELP3 ENSGALG00000016624 4483 0.831 - - - - - - - - 0.831 - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
28. OAT ENSGALG00000031158 10249 0.83 - - - - - - 0.830 - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
29. PAM16 9684 0.829 - - - - - - 0.829 - - - presequence translocase associated motor 16 homolog, transcript variant X2
30. NANS ENSGALG00000015320 10552 0.826 - - - - - - - 0.826 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
31. CANX ENSGALG00000032148 11297 0.826 - - - - - - 0.826 - - - calnexin [Source:NCBI gene;Acc:416288]
32. TAF8 ENSGALG00000003498 2071 0.825 - - - - - - 0.825 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
33. PAN3 ENSGALG00000017092 5387 0.825 - - - - - - - - 0.825 - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
34. CENPC1 CENPC1 3324 0.825 - - - - - - 0.825 - - -
35. SUGP1 ENSGALG00000042132 2771 0.824 - - - - - - 0.824 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
36. TGDS ENSGALG00000016898 3206 0.823 - - - - - - 0.823 - - - TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
37. CACYBP ENSGALG00000004554 7320 0.823 - - - - - - 0.823 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
38. ECHDC3 ENSGALG00000006690 1299 0.823 - - - - - - 0.823 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
39. USP8 ENSGALG00000005894 4499 0.821 - - - - - - 0.821 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
40. KLHL15 ENSGALG00000016345 1638 0.817 - - - - - - - 0.817 - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
41. RBM19 ENSGALG00000008289 10702 0.817 - - - - - - 0.817 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
42. VIPAS39 ENSGALG00000010459 2090 0.814 - - - - - - - - 0.814 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
43. RABL5 RABL5 5264 0.814 - - - - - - 0.814 - - -
44. YIPF6 ENSGALG00000035973 3333 0.813 - - - - - - - 0.813 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
45. RFT1 ENSGALG00000001945 2446 0.812 - - - - - - 0.812 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
46. WIPI1 ENSGALG00000004215 3359 0.812 - - - - - - 0.812 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
47. PRDM4 ENSGALG00000012619 876 0.811 - - - - - - - - 0.811 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
48. MBNL2 ENSGALG00000016890 3162 0.811 - - - - - - 0.811 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
49. EIF5B ENSGALG00000016764 30681 0.809 - - - - - - - 0.809 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
50. EIF3I ENSGALG00000003337 28832 0.809 - - - - - - 0.809 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
51. SDR42E1 ENSGALG00000005456 586 0.808 - - - - - - - - 0.808 - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
52. APRT ENSGALG00000031000 7535 0.805 - - - - - - 0.805 - - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
53. MORC3 ENSGALG00000036556 2976 0.805 - - - - - - 0.805 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
54. KIAA0232 ENSGALG00000015538 717 0.805 - - - - - - - - 0.805 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
55. SMAD5 ENSGALG00000006309 1748 0.805 - - - - - - 0.805 - - - SMAD family member 5 [Source:NCBI gene;Acc:395679]
56. NSG1 ENSGALG00000015010 5829 0.804 - - - - - - 0.804 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
57. GALNT9 ENSGALG00000002242 219 0.803 - - - - - - - - 0.803 - polypeptide N-acetylgalactosaminyltransferase 9 [Source:HGNC Symbol;Acc:HGNC:4131]
58. C13H5ORF41 C13H5ORF41 1051 0.802 - - - - - - 0.802 - - -
59. ZNF451 ENSGALG00000016282 3380 0.799 - - - - - - 0.799 - - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
60. FBXW11 ENSGALG00000002229 5805 0.799 - - - - - - 0.799 - - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
61. NIF3L1 ENSGALG00000008226 1500 0.799 - - - - - - - - 0.799 - NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
62. ENSGALG00000024348 ENSGALG00000024348 254 0.799 - - - - - - - - 0.799 -
63. ETAA1 ENSGALG00000027922 1684 0.795 - - - - - - 0.795 - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
64. ALDH5A1 ENSGALG00000032544 4924 0.795 - - - - - - - - 0.795 - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
65. IK ENSGALG00000037172 12100 0.795 - - - - - - 0.795 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
66. TH1L TH1L 1358 0.794 - - - - - - - - 0.794 -
67. KANK1 ENSGALG00000010158 3780 0.794 - - - - - - 0.794 - - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
68. RBL1 ENSGALG00000001332 2568 0.794 - - - - - - 0.794 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
69. TMEM39B ENSGALG00000003287 4125 0.793 - - - - - - 0.793 - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
70. VPS29 ENSGALG00000004529 22509 0.792 - - - - - - 0.792 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
71. NOP16 ENSGALG00000003355 10692 0.792 - - - - - - - 0.792 - - NOP16 nucleolar protein
72. SCHIP1 ENSGALG00000039468 5912 0.792 - - - - - - 0.792 - - - schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]
73. RNF152 ENSGALG00000028822 291 0.791 - - - - - - - - 0.791 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
74. NAT9 ENSGALG00000007723 2098 0.791 - - - - - - 0.791 - - - N-acetyltransferase 9 (putative), transcript variant X7
75. ENSGALG00000001861 ENSGALG00000001861 10150 0.79 - - - - - - - 0.790 - -
76. EFNB2 ENSGALG00000029175 5664 0.79 - - - - - - 0.790 - - - ephrin B2 [Source:NCBI gene;Acc:395625]
77. GGCT ENSGALG00000030552 3446 0.79 - - - - - - 0.790 - - - gamma-glutamylcyclotransferase
78. FZD6 ENSGALG00000030626 3336 0.79 - - - - - - - - 0.790 - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
79. ATP6AP1 ENSGALG00000008836 4343 0.79 - - - - - - - - 0.790 - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
80. MBNL1 ENSGALG00000029190 3953 0.789 - - - - - - 0.789 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
81. TADA1L TADA1L 6659 0.789 - - - - - - 0.789 - - -
82. SRPK1 ENSGALG00000037546 1849 0.788 - - - - - - 0.788 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
83. ATP1A1 ENSGALG00000032247 15898 0.787 - - - - - - 0.787 - - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
84. SPDL1 ENSGALG00000001942 4403 0.787 - - - - - - - 0.787 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
85. PRRG1 ENSGALG00000016266 3473 0.785 - - - - - - - - 0.785 - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
86. ZNF142 ENSGALG00000011393 2078 0.785 - - - - - - 0.785 - - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
87. ADI1 ENSGALG00000025796 8636 0.785 - - - - - - - 0.785 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
88. PSMC5 ENSGALG00000000349 21346 0.783 - - - - - - 0.783 - - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
89. FMR1 ENSGALG00000009177 561 0.781 - - - - - - - - 0.781 - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
90. AMD1 ENSGALG00000039575 8900 0.781 - - - - - - - - 0.781 - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
91. PEX10 ENSGALG00000001223 5704 0.78 - - - - - - 0.780 - - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
92. RAB5C ENSGALG00000003359 5597 0.78 - - - - - - - 0.780 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
93. SNX3 ENSGALG00000015304 1631 0.778 - - - - - - - - 0.778 - sorting nexin 3 [Source:NCBI gene;Acc:421772]
94. HKDC1 ENSGALG00000021039 134 0.778 - - - - - - - - 0.778 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
95. SNRK ENSGALG00000039920 174 0.778 - - - - - - - - 0.778 - SNF related kinase [Source:NCBI gene;Acc:420675]
96. CHCHD3 ENSGALG00000006489 18592 0.777 - - - - - - 0.777 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
97. KANK4 ENSGALG00000010953 726 0.777 - - - - - - 0.777 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
98. VCPIP1 ENSGALG00000042883 139 0.776 - - - - - - - - 0.776 - valosin containing protein interacting protein 1 [Source:NCBI gene;Acc:428359]
99. WDR47 ENSGALG00000002129 2624 0.776 - - - - - - 0.776 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
100. ZYX ENSGALG00000014688 8686 0.776 - - - - - - 0.776 - - - zyxin [Source:NCBI gene;Acc:418300]

There are 321 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA