Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MED1

Gene Name Gene ID Reads Annotation
MED1 ENSGALG00000001708 9556 mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]











Genes with expression patterns similar to MED1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MED1 ENSGALG00000001708 9556 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
2. LUC7L2 ENSGALG00000036238 11817 1.951 - - - - 0.987 - - 0.964 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
3. ZEB1 ENSGALG00000007260 9277 1.95 - - - - 0.962 - - 0.988 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
4. CDC5L ENSGALG00000016704 22893 1.916 - - - - 0.969 - 0.947 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
5. SPINT1 ENSGALG00000008469 5735 1.893 - - - - - - 0.958 0.935 - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
6. ENSGALG00000000360 ENSGALG00000000360 15320 1.839 - - - - 0.941 - 0.898 - - -
7. SMNDC1 ENSGALG00000008561 14415 1.835 - - - - 0.955 - - 0.880 - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
8. RUNX1T1 ENSGALG00000033091 17529 1.701 - - - - 0.921 - - 0.780 - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
9. BUB3 ENSGALG00000009681 36055 1.665 - - - - 0.729 - 0.936 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
10. EFNB1 ENSGALG00000036539 2706 0.998 - - - - - - - 0.998 - - ephrin B1 [Source:NCBI gene;Acc:395896]
11. PIK3C2B ENSGALG00000037043 4522 0.998 - - - - - - - 0.998 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
12. FPGS ENSGALG00000042460 1749 0.998 - - - - - - - 0.998 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
13. ERAL1 ENSGALG00000003995 1114 0.998 - - - - - - - 0.998 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
14. CHEK2 ENSGALG00000005695 1558 0.998 - - - - - - - 0.998 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
15. NEK1 ENSGALG00000009683 4305 0.998 - - - - - - - 0.998 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
16. XPOT ENSGALG00000009835 2953 0.998 - - - - - - - 0.998 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
17. GTF2H1 ENSGALG00000042340 1553 0.998 - - - - - - - 0.998 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
18. ERICH1 ENSGALG00000031021 1495 0.998 - - - - - - - 0.998 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
19. VPS39 ENSGALG00000008991 4018 0.998 - - - - - - - 0.998 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
20. CRADD ENSGALG00000011297 1653 0.998 - - - - - - - 0.998 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
21. C12orf45 C12orf45 2445 0.998 - - - - - - - 0.998 - -
22. HEXA ENSGALG00000043828 4789 0.998 - - - - - - - 0.998 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
23. FAM69B ENSGALG00000002437 1253 0.998 - - - - - - - 0.998 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
24. STXBP3 ENSGALG00000002001 1740 0.997 - - - - - - - 0.997 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
25. gga-mir-6584 ENSGALG00000028834 1481 0.997 - - - - 0.997 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
26. PDIA3 ENSGALG00000008348 4982 0.997 - - - - - - - 0.997 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
27. ARPC5L ENSGALG00000001014 5642 0.997 - - - - - - - 0.997 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
28. ANKS1B ENSGALG00000011549 440 0.997 - - - - - - - 0.997 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
29. UQCC UQCC 5913 0.997 - - - - - - - 0.997 - -
30. ADAMTSL1 1479 0.997 - - - - - - - 0.997 - - ADAMTS like 1, transcript variant X3
31. C20ORF7 C20ORF7 2383 0.997 - - - - - - - 0.997 - -
32. ATOX1 ENSGALG00000004176 16486 0.997 - - - - - - - 0.997 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
33. PDE4B ENSGALG00000011094 1871 0.997 - - - - - - - 0.997 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
34. MAP9 ENSGALG00000020253 785 0.997 - - - - - - - 0.997 - - microtubule associated protein 9, transcript variant X7
35. HTRA3 ENSGALG00000034673 512 0.997 - - - - 0.997 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
36. MRPL22 ENSGALG00000003919 2760 0.996 - - - - 0.996 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
37. IFT81 ENSGALG00000003854 2534 0.996 - - - - - - - 0.996 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
38. EPB41L1 ENSGALG00000034171 3616 0.996 - - - - 0.996 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
39. IBA57 ENSGALG00000005328 4362 0.996 - - - - 0.996 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
40. PPAPDC1B PPAPDC1B 6698 0.996 - - - - 0.996 - - - - -
41. NDST2 ENSGALG00000005107 4224 0.996 - - - - 0.996 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
42. ELP3 ENSGALG00000016624 4483 0.996 - - - - - - - 0.996 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
43. ANKRD49 ENSGALG00000017210 3247 0.996 - - - - - - - 0.996 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
44. DUSP3 ENSGALG00000035369 1790 0.996 - - - - - - - 0.996 - - dual specificity phosphatase 3
45. TBC1D7 ENSGALG00000012731 4891 0.996 - - - - 0.996 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
46. MYEOV2 MYEOV2 5155 0.996 - - - - 0.996 - - - - -
47. TMEM39B ENSGALG00000003287 4125 0.995 - - - - 0.995 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
48. WDR92 ENSGALG00000008760 3934 0.995 - - - - - - - 0.995 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
49. CCDC59 ENSGALG00000028648 9272 0.995 - - - - 0.995 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
50. WHSC1L1 4065 0.995 - - - - 0.995 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
51. RNF113A ENSGALG00000000538 3985 0.995 - - - - 0.995 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
52. RAE1 ENSGALG00000007653 8930 0.995 - - - - 0.995 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
53. PDS5B ENSGALG00000017070 3998 0.995 - - - - - - - 0.995 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
54. MRPL46 ENSGALG00000006782 5033 0.995 - - - - 0.995 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
55. BCL2L1 ENSGALG00000006211 2490 0.995 - - - - - - - 0.995 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
56. SEC61A2 ENSGALG00000036300 4235 0.995 - - - - 0.995 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
57. FABP3 ENSGALG00000037050 873 0.995 - - - - - - - 0.995 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
58. PHKA1 ENSGALG00000004801 2510 0.995 - - - - 0.995 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
59. NOL6 ENSGALG00000030730 7191 0.994 - - - - 0.994 - - - - - nucleolar protein 6
60. BCL9 ENSGALG00000037655 4620 0.994 - - - - 0.994 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
61. HYOU1 ENSGALG00000007659 3555 0.994 - - - - 0.994 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
62. TRIB2 ENSGALG00000016457 17641 0.994 - - - - - - 0.994 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
63. SOX9 ENSGALG00000004386 14802 0.994 - - - - - - - 0.994 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
64. MAP1B ENSGALG00000014999 6288 0.994 - - - - 0.994 - - - - - microtubule associated protein 1B
65. FZD6 ENSGALG00000030626 3336 0.994 - - - - - - - 0.994 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
66. DCTN6 ENSGALG00000010298 7507 0.994 - - - - - - - 0.994 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
67. HMGB3 ENSGALG00000009071 12011 0.993 - - - - 0.993 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
68. C15H12ORF49 C15H12ORF49 13250 0.993 - - - - 0.993 - - - - -
69. ABCC1 ENSGALG00000006646 2596 0.993 - - - - 0.993 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
70. AGPAT3 ENSGALG00000031932 6903 0.993 - - - - 0.993 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
71. USP1 ENSGALG00000010957 8297 0.992 - - - - 0.992 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
72. KCTD9 ENSGALG00000000275 3455 0.992 - - - - 0.992 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
73. TBC1D1 ENSGALG00000039380 4423 0.992 - - - - - - - 0.992 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
74. MRPS11 ENSGALG00000006777 16009 0.992 - - - - 0.992 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
75. TBRG4 ENSGALG00000038102 9269 0.992 - - - - 0.992 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
76. DNAJC2 ENSGALG00000008249 28064 0.992 - - - - 0.992 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
77. OPTC ENSGALG00000003554 3698 0.991 - - - - 0.991 - - - - - opticin [Source:NCBI gene;Acc:395130]
78. TNPO3 ENSGALG00000039420 5178 0.991 - - - - 0.991 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
79. EIF1AY ENSGALG00000016410 6431 0.991 - - - - - - - 0.991 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
80. TMEM18 ENSGALG00000028744 11779 0.99 - - - - 0.990 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
81. TM2D2 ENSGALG00000003356 7088 0.99 - - - - 0.990 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
82. C4orf46 ENSGALG00000009432 3255 0.99 - - - - - - - 0.990 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
83. TRIM33 ENSGALG00000001976 7404 0.99 - - - - 0.990 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
84. NSG1 ENSGALG00000015010 5829 0.99 - - - - 0.990 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
85. THBS1 ENSGALG00000009626 3521 0.99 - - - - 0.990 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
86. VPS8 ENSGALG00000006704 5419 0.99 - - - - 0.990 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
87. RILPL2 ENSGALG00000003321 5632 0.989 - - - - 0.989 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
88. EMC7 ENSGALG00000009637 4969 0.989 - - - - - - - 0.989 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
89. PES1 ENSGALG00000007778 12248 0.989 - - - - - - - 0.989 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
90. HOXB3 ENSGALG00000043219 5198 0.988 - - - - 0.988 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
91. SPG21 ENSGALG00000007262 8050 0.988 - - - - 0.988 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
92. PSMD13 ENSGALG00000043684 14720 0.988 - - - - - - 0.988 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
93. SDHA ENSGALG00000013167 6509 0.988 - - - - - - - 0.988 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
94. M6PR ENSGALG00000031681 9442 0.988 - - - - 0.988 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
95. PGAM5 ENSGALG00000002137 7700 0.988 - - - - 0.988 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
96. CENPE ENSGALG00000013208 12337 0.988 - - - - 0.988 - - - - - centromere protein E, transcript variant X4
97. C4orf27 C4orf27 16724 0.987 - - - - 0.987 - - - - -
98. UQCRC2 ENSGALG00000002490 23477 0.987 - - - - 0.987 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
99. EXOSC7 ENSGALG00000030084 8654 0.986 - - - - - - 0.986 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
100. RAB21 ENSGALG00000010183 7718 0.986 - - - - 0.986 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]

There are 233 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA