Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ME1

Gene Name Gene ID Reads Annotation
ME1 ENSDARG00000053215 8 malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]










Genes with expression patterns similar to ME1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ME1 ENSDARG00000053215 8 6 1.000 1.000 - - 1.000 1.000 1.000 1.000 - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
2. sox8 sox8 109 2.419 0.714 1.000 - - - - 0.705 - -
3. zgc:136493 ENSDARG00000029259 132 2.36 0.715 0.818 - - - 0.827 - - - zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
4. si:ch211-155d24.7 si:ch211-155d24.7 17 2 - - - - - 1.000 1.000 - -
5. si:ch73-290k24.5 ENSDARG00000076310 39 2 1.000 1.000 - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
6. CU694254.1 CU694254.1 4 2 - 1.000 - - - 1.000 - - -
7. zgc:92590 ENSDARG00000040282 13 2 - - - - - 1.000 1.000 - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
8. arhgef3 ENSDARG00000013834 3 1.989 - 1.000 - - 0.989 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
9. gdf10a ENSDARG00000095378 12 1.976 - 1.000 - - 0.976 - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
10. si:dkey-16n15.6 ENSDARG00000095805 18 1.957 1.000 - - - - 0.957 - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
11. gdf6b ENSDARG00000005510 106 1.95 - 0.950 - - - 1.000 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
12. zglp1 ENSDARG00000067669 6 1.894 - - - - 0.894 - 1.000 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
13. si:ch211-223f7.1 si:ch211-223f7.1 38 1.892 1.000 - - - 0.892 - - - -
14. zgc:165525 zgc:165525 207 1.887 0.887 - - - - - 1.000 - -
15. si:ch211-255a21.4 si:ch211-255a21.4 26 1.871 - 1.000 - - 0.871 - - - -
16. si:dkey-256i11.4 si:dkey-256i11.4 3 1.836 - - - - - 1.000 0.836 - -
17. lgalslb ENSDARG00000055525 18 1.831 0.831 1.000 - - - - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
18. tbx6 ENSDARG00000011785 132 1.824 0.824 - - - - - 1.000 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
19. casd1 ENSDARG00000023900 12 1.808 - - - - - 1.000 - 0.808 - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
20. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.8 - 1.000 - - - - 0.800 - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
21. MOV10L1 MOV10L1 21 1.798 - 1.000 - - - - 0.798 - -
22. zgc:194470 zgc:194470 210 1.769 - 0.824 - - - - 0.945 - -
23. CHCHD5 ENSDARG00000091754 35 1.737 0.737 - - - - 1.000 - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
24. cftr ENSDARG00000041107, ENSDARG00000110312 56 1.734 - 0.896 - - - 0.838 - - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
25. CR376785.2 CR376785.2 175 1.73 - 1.000 - - - - 0.730 - -
26. DNAJC14 ENSDARG00000105398 20 1.708 - 1.000 - - - 0.708 - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
27. SPTBN1 ENSDARG00000102883 26 1.706 0.877 - - - 0.829 - - - - spectrin, beta, non-erythrocytic 1 [Source:ZFIN;Acc:ZDB-GENE-031006-3]
28. CABZ01038313.1 CABZ01038313.1 79 1.701 - 1.000 - - 0.701 - - - -
29. aqp7 ENSDARG00000026787 37 1.689 0.930 - - - - - 0.759 - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
30. elna 38 1.668 - - - - - 0.962 0.706 - - elastin a, transcript variant X20
31. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1.659 0.946 0.713 - - - - - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
32. nsun3 ENSDARG00000013023 136 1.658 0.945 0.713 - - - - - - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
33. sstr1a ENSDARG00000104922 22 1.652 - - - - 0.873 - 0.779 - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
34. zgc:162576 zgc:162576 56 1.632 0.830 0.802 - - - - - - -
35. CABZ01026370.1 CABZ01026370.1 286 1.621 - 0.797 - - - 0.824 - - -
36. zgc:194621 ENSDARG00000074696 85 1.602 0.828 0.774 - - - - - - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
37. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 1.584 0.875 - - - - 0.709 - - - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
38. kif20bb ENSDARG00000040110 438 1.522 0.739 0.783 - - - - - - - kinesin family member 20Bb [Source:ZFIN;Acc:ZDB-GENE-030131-9684]
39. RUFY1 ENSDARG00000078685 114 1.512 0.778 - - - - 0.734 - - - RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
40. aqp8b ENSDARG00000089749 108 1.495 - 0.770 - - - 0.725 - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
41. foxp3a ENSDARG00000055750 15 1.494 - - - - - 0.715 0.779 - - forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2]
42. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.483 0.778 - - - 0.705 - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
43. mir92a-1 20 1.482 - 0.731 - - - 0.751 - - - microRNA 92a-1
44. mdm1 ENSDARG00000045675 64 1.465 0.752 0.713 - - - - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
45. tbx6l 87 1.424 - 0.709 - - - 0.715 - - - T-box 6, like, transcript variant X2
46. BAI1_1 BAI1_1 57 1.409 - 0.704 - - 0.705 - - - -
47. CR631122.1 ENSDARG00000044534 8 1 - - - - - 1.000 - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
48. CR318593.1_1 CR318593.1_1 8 1 - 1.000 - - - - - - -
49. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - 1.000 - - - - - - -
50. evlb ENSDARG00000099720 245 1 - 1.000 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
51. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -
52. si:ch211-190g11.1 si:ch211-190g11.1 0 1 - - - - - - 1.000 - -
53. GPR20 ENSDARG00000077427 1 1 - - - - - 1.000 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
54. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 - 1.000 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
55. KCNIP4 ENSDARG00000088100 86 1 - 1.000 - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
56. CU694952.2 CU694952.2 3 1 - - - - - 1.000 - - -
57. si:dkey-273g18.1_1 ENSDARG00000097405, ENSDARG00000105439 5 1 - 1.000 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
58. pak1 ENSDARG00000103959 32 1 - - - - - - 1.000 - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
59. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
60. RECK ENSDARG00000090039 15 1 - 1.000 - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
61. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - 1.000 - - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
62. aff4 ENSDARG00000001857 134 1 - - - - - - 1.000 - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
63. trpm3 ENSDARG00000039181 2 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
64. PARP6 PARP6 119 1 - 1.000 - - - - - - -
65. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
66. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
67. PDE4B PDE4B 13 1 - - - - - - 1.000 - -
68. pdcl ENSDARG00000009480 12 1 - - - - - - 1.000 - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
69. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
70. tyro3 ENSDARG00000005356 4 1 - 1.000 - - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
71. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - 1.000 - - -
72. hes2.2 ENSDARG00000068168 197 1 - 1.000 - - - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
73. pdca ENSDARG00000011886 1 1 - - - - - 1.000 - - - phosducin a [Source:ZFIN;Acc:ZDB-GENE-031023-1]
74. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
75. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
76. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - - - 1.000 - -
77. SGCZ ENSDARG00000106258 2 1 - - - - - - 1.000 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
78. rs1 rs1 70 1 - 1.000 - - - - - - -
79. BX682234.3 BX682234.3 7 1 - 1.000 - - - - - - -
80. SLC28A2 SLC28A2 21 1 1.000 - - - - - - - -
81. smcr8b ENSDARG00000015803 3 1 - 1.000 - - - - - - - Smith-Magenis syndrome chromosome region, candidate 8b [Source:ZFIN;Acc:ZDB-GENE-061122-1]
82. fermt3b ENSDARG00000030938 17 1 1.000 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
83. zgc:194275 ENSDARG00000074014 130 1 - - - - - 1.000 - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
84. eif2b5 ENSDARG00000074995 8 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
85. CABZ01016604.1 CABZ01016604.1 12 1 - - - - - 1.000 - - -
86. CT573256.1 ENSDARG00000091657 18 1 - - - - - - 1.000 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
87. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
88. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
89. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
90. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - 1.000 - - - - - - -
91. CABZ01074423.1 CABZ01074423.1 8 1 - 1.000 - - - - - - -
92. f8 ENSDARG00000101385 1 1 - - - - - 1.000 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
93. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
94. srd5a3 ENSDARG00000043307 142 1 - - - - - 1.000 - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
95. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
96. klhl6 ENSDARG00000026990 24 1 - 1.000 - - - - - - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
97. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
98. si:dkeyp-33c10.5 11 1 - 1.000 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
99. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1 - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
100. BX000430.1 ENSDARG00000112057 135 1 - 1.000 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]

There are 1105 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA