Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MDH2

Gene Name Gene ID Reads Annotation
MDH2 ENSGALG00000001949 68323 malate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:6971]











Genes with expression patterns similar to MDH2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MDH2 ENSGALG00000001949 68323 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 malate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:6971]
2. GSTO1 ENSGALG00000008409 7561 1.444 - - - - 0.707 0.737 - - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
3. TAX1BP3 ENSGALG00000004618 35172 0.938 - - - - - - 0.938 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
4. HSPA8 ENSGALG00000006512 124825 0.916 - - - - - 0.916 - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
5. CNBP 42704 0.886 - - - - - 0.886 - - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
6. MRPL20 ENSGALG00000001542 28764 0.847 - - - - - 0.847 - - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
7. HSPE1 ENSGALG00000009070 87567 0.84 - - - - - 0.840 - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
8. SHFM1 SHFM1 51606 0.831 - - - - - 0.831 - - - -
9. MT-ND4L MT-ND4L 12537 0.82 - - - - - - - 0.820 - -
10. MCTS1 ENSGALG00000008517 27514 0.819 - - - - 0.819 - - - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
11. ATG16L1 ENSGALG00000001619 3562 0.816 - - - - 0.816 - - - - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
12. KDM5B ENSGALG00000038948 50645 0.806 - - - - - 0.806 - - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
13. HSP90AA1 ENSGALG00000033212 55740 0.803 - - - - - 0.803 - - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
14. UBE2R2 ENSGALG00000001668 9234 0.795 - - - - - - - 0.795 - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
15. PSMD7 ENSGALG00000000707 26350 0.794 - - - - - 0.794 - - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
16. AHSA1 ENSGALG00000010463 15252 0.792 - - - - - 0.792 - - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
17. HSPD1 ENSGALG00000008094 40870 0.792 - - - - - 0.792 - - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
18. HSP90B1 ENSGALG00000033789 58910 0.792 - - - - - 0.792 - - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
19. SSB ENSGALG00000009677 25335 0.785 - - - - - 0.785 - - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
20. CANX ENSGALG00000032148 11297 0.785 - - - - - 0.785 - - - - calnexin [Source:NCBI gene;Acc:416288]
21. TMSB4X ENSGALG00000026383 293046 0.782 - - - - - 0.782 - - - - Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
22. PSMD14 ENSGALG00000011128 13335 0.779 - - - - - - - 0.779 - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
23. HSPA5 ENSGALG00000001000 40342 0.779 - - - - - 0.779 - - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
24. AKAP12 ENSGALG00000036240 64617 0.778 - - - - - 0.778 - - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
25. RAN ENSGALG00000002569 197034 0.777 - - - - - 0.777 - - - - RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
26. CCT5 ENSGALG00000013041 56190 0.771 - - - - - 0.771 - - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
27. TALDO1 ENSGALG00000037195 30673 0.767 - - - - 0.767 - - - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
28. H2AFZ ENSGALG00000014023 117824 0.763 - - - - - 0.763 - - - - H2A histone family, member Z [Source:NCBI gene;Acc:426361]
29. COPB1 ENSGALG00000006015 16518 0.763 - - - - - - - 0.763 - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
30. CCND1 ENSGALG00000007555 6715 0.762 - - - - - 0.762 - - - - cyclin D1 [Source:NCBI gene;Acc:396341]
31. HOTAIRM1 HOTAIRM1 4335 0.76 - - - - - 0.760 - - - -
32. YWHAE ENSGALG00000002661 37143 0.755 - - - - 0.755 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
33. LRP11 ENSGALG00000019987 3341 0.754 - - - - 0.754 - - - - - LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]
34. WLS ENSGALG00000011238 20969 0.753 - - - - 0.753 - - - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
35. SAAL1 ENSGALG00000026111 8340 0.749 - - - - 0.749 - - - - - serum amyloid A like 1
36. MTX2 ENSGALG00000009264 17304 0.746 - - - - 0.746 - - - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
37. RGMA ENSGALG00000039173 12874 0.745 - - - - 0.745 - - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
38. LARP1 ENSGALG00000040109 14808 0.744 - - - - - - - 0.744 - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
39. ENSGALG00000028938 ENSGALG00000028938 18616 0.743 - - - - 0.743 - - - - -
40. COPB2 ENSGALG00000005357 15208 0.742 - - - - - - - 0.742 - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
41. SRI ENSGALG00000008985 13865 0.741 - - - - - - - 0.741 - - sorcin [Source:NCBI gene;Acc:420538]
42. BUB3 ENSGALG00000009681 36055 0.736 - - - - - 0.736 - - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
43. TCOF1 ENSGALG00000005535 24554 0.735 - - - - - 0.735 - - - - treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
44. PPID ENSGALG00000009451 7529 0.734 - - - - - 0.734 - - - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
45. MOB3A ENSGALG00000031729 9690 0.732 - - - - 0.732 - - - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
46. EIF3J ENSGALG00000008187 43570 0.731 - - - - - 0.731 - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
47. LYAR ENSGALG00000015000 10756 0.731 - - - - - 0.731 - - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
48. TRNT1 ENSGALG00000017368 11932 0.728 - - - - - 0.728 - - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
49. HSP90AB1 ENSGALG00000010175 77935 0.727 - - - - - 0.727 - - - - heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
50. CIRBP ENSGALG00000030918 309258 0.722 - - - - - 0.722 - - - - cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
51. PGK1 ENSGALG00000007936 70101 0.721 - - - - - 0.721 - - - - phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
52. DNAJA1 ENSGALG00000023066 3820 0.721 - - - - - 0.721 - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
53. SEC61B ENSGALG00000013569 48883 0.72 - - - - - 0.720 - - - - Sec61 translocon beta subunit [Source:NCBI gene;Acc:420997]
54. NPM3 ENSGALG00000032329 21138 0.719 - - - - - 0.719 - - - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
55. POLR2K ENSGALG00000036019 8962 0.719 - - - - 0.719 - - - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
56. ENSGALG00000004132 ENSGALG00000004132 9287 0.718 - - - - - 0.718 - - - -
57. ALG2 ENSGALG00000013573 5229 0.718 - - - - - - - 0.718 - - ALG2, alpha-1,3/1,6-mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23159]
58. SMARCB1 ENSGALG00000005983 20548 0.718 - - - - 0.718 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
59. HNRNPH3 ENSGALG00000003947 28724 0.717 - - - - - 0.717 - - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
60. MIF ENSGALG00000006326 109683 0.717 - - - - - 0.717 - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
61. PSMA7 ENSGALG00000030411 42436 0.715 - - - - - 0.715 - - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
62. FABP5 ENSGALG00000041344 3984 0.715 - - - - - 0.715 - - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
63. COX6A1 ENSGALG00000007205 72629 0.714 - - - - 0.714 - - - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
64. HNRNPU ENSGALG00000010671 56560 0.713 - - - - 0.713 - - - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
65. TPRKB ENSGALG00000013018 8687 0.71 - - - - - 0.710 - - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
66. MAGOH 28688 0.709 - - - - - 0.709 - - - - mago homolog, exon junction complex core component
67. HNRNPDL ENSGALG00000023199 112033 0.709 - - - - - 0.709 - - - - heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
68. UBE2C ENSGALG00000026380 27639 0.708 - - - - - 0.708 - - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
69. GEMIN6 ENSGALG00000013821 5589 0.707 - - - - - 0.707 - - - - gem nuclear organelle associated protein 6 [Source:NCBI gene;Acc:426266]
70. SET ENSGALG00000004701 103296 0.706 - - - - - 0.706 - - - - SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
71. TUBB2C TUBB2C 44249 0.704 - - - - - 0.704 - - - -
72. HIGD1A ENSGALG00000030775 5724 0.703 - - - - - 0.703 - - - - HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
73. RBBP4 ENSGALG00000003522 72455 0.702 - - - - 0.702 - - - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
74. LLPH ENSGALG00000019358 20976 0.702 - - - - - 0.702 - - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
75. MRPL15 ENSGALG00000041086 16820 0.701 - - - - - 0.701 - - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
76. MRPS36 ENSGALG00000014789 7584 0.701 - - - - - 0.701 - - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
77. UQCRC2 ENSGALG00000002490 23477 0.701 - - - - - 0.701 - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
78. EI24 ENSGALG00000038097 24081 0.701 - - - - - 0.701 - - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA