Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MDH1B

Gene Name Gene ID Reads Annotation
MDH1B ENSGALG00000008548 22 malate dehydrogenase 1B [Source:HGNC Symbol;Acc:HGNC:17836]











Genes with expression patterns similar to MDH1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MDH1B ENSGALG00000008548 22 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 malate dehydrogenase 1B [Source:HGNC Symbol;Acc:HGNC:17836]
2. ACTL10 ACTL10 3 1.717 - - 0.717 - 1.000 - - - - -
3. PDZD2 16 1 - - - - 1.000 - - - - - PDZ domain containing 2, transcript variant X1
4. PHACTR2 ENSGALG00000013768 44 1 - - - - 1.000 - - - - - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
5. SPEF2 ENSGALG00000023552 23 1 - - - - 1.000 - - - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
6. MRAP2 ENSGALG00000015838 7 1 - - - - 1.000 - - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
7. C5orf49 ENSGALG00000027654 0 1 - - - - 1.000 - - - - - chromosome 5 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:27028]
8. TFAP4 ENSGALG00000027823 12 1 - - - - 1.000 - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
9. MID2 ENSGALG00000003860 3 1 - - - - 1.000 - - - - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
10. IFNG ENSGALG00000009903 5 1 - - - - 1.000 - - - - - interferon gamma [Source:NCBI gene;Acc:396054]
11. BLVRA ENSGALG00000031786 23 1 - - - - 1.000 - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
12. TROVE2 ENSGALG00000002504 14 1 - - - - 1.000 - - - - - TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
13. CCL1 ENSGALG00000002329 2 1 - - - - 1.000 - - - - - C-C motif chemokine ligand 1 [Source:NCBI gene;Acc:395552]
14. PCYT1A ENSGALG00000007474 17 1 - - - - 1.000 - - - - - phosphate cytidylyltransferase 1, choline, alpha [Source:HGNC Symbol;Acc:HGNC:8754]
15. CNTNAP4 ENSGALG00000023179 13 1 - - - - 1.000 - - - - - contactin associated protein like 4
16. FOXL2 ENSGALG00000029282 1 1 - - - - 1.000 - - - - - forkhead box L2 [Source:NCBI gene;Acc:503512]
17. RASD1 ENSGALG00000004860 133 1 - - - - 1.000 - - - - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
18. NOL4_1 ENSGALG00000015198 3 1 - - - - 1.000 - - - - - nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]
19. ENTPD7 ENSGALG00000023691 46 1 - - - - 1.000 - - - - - ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
20. DNER ENSGALG00000002958 3 1 - - - - 1.000 - - - - - delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
21. FAM151B ENSGALG00000015577 11 1 - - - - 1.000 - - - - - family with sequence similarity 151 member B
22. ST7L ENSGALG00000001538 5 1 - - - - 1.000 - - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
23. LOC428714 ENSGALG00000007530 41 1 - - - - 1.000 - - - - - LOC428714, transcript variant X2
24. EPYC ENSGALG00000011269 17 1 - - - - 1.000 - - - - - epiphycan [Source:NCBI gene;Acc:417890]
25. WFIKKN1 ENSGALG00000000044 19 1 - - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30912]
26. MZB1 ENSGALG00000044427 6 1 - - - - 1.000 - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
27. EEF2K ENSGALG00000006982 12 1 - - - - 1.000 - - - - - eukaryotic elongation factor 2 kinase [Source:HGNC Symbol;Acc:HGNC:24615]
28. MED22 ENSGALG00000003204 0 1 - - - - 1.000 - - - - - mediator complex subunit 22 [Source:NCBI gene;Acc:417159]
29. EHD4 ENSGALG00000008950 22 1 - - - - - - 1.000 - - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
30. NEDD9 ENSGALG00000012747 30 1 - - - - 1.000 - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
31. CHODL ENSGALG00000015720 3 1 - - - - 1.000 - - - - - chondrolectin [Source:HGNC Symbol;Acc:HGNC:17807]
32. PTPN7 ENSGALG00000036093 92 0.939 - - - - - 0.939 - - - - protein tyrosine phosphatase, non-receptor type 7 [Source:HGNC Symbol;Acc:HGNC:9659]
33. ARL11 ENSGALG00000022733 490 0.927 - - - - - - - - - 0.927 ADP ribosylation factor like GTPase 11 [Source:HGNC Symbol;Acc:HGNC:24046]
34. ADORA2A ENSGALG00000006642 178 0.9 - - - - - 0.900 - - - - adenosine A2a receptor [Source:HGNC Symbol;Acc:HGNC:263]
35. BBS9 ENSGALG00000031650 13 0.892 - - - - - - - - - 0.892 Bardet-Biedl syndrome 9, transcript variant X5
36. TCEANC2 ENSGALG00000010749 162 0.881 - - - - - - - - - 0.881 transcription elongation factor A N-terminal and central domain containing 2 [Source:NCBI gene;Acc:424657]
37. SULT6B1 ENSGALG00000046375 23 0.881 - - - - - - 0.881 - - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
38. ASB1 ENSGALG00000004272 38 0.861 - - - - - 0.861 - - - - ankyrin repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:16011]
39. PDE6H ENSGALG00000025735 37 0.849 - - - - - - - - - 0.849 phosphodiesterase 6H [Source:NCBI gene;Acc:378929]
40. P2RY13 ENSGALG00000039432 16 0.848 - - - - - - 0.848 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
41. LZTS2 ENSGALG00000023612 9 0.848 - - - - - - 0.848 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
42. CBLN4 ENSGALG00000030821 9 0.848 - - - - - - 0.848 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
43. HPS3 ENSGALG00000040089 44 0.848 - - - - - - 0.848 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
44. SNORD79 SNORD79 12 0.848 - - - - - - 0.848 - - -
45. FGF13 ENSGALG00000006508 8 0.848 - - - - - - 0.848 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
46. COL4A3BP ENSGALG00000014952 96 0.848 - - - - - - 0.848 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
47. FOXP1 127 0.848 - - - - - - 0.848 - - - forkhead box P1, transcript variant X14
48. ENSGALG00000010218 ENSGALG00000010218 12 0.848 - - - - - - 0.848 - - -
49. RD RD 99 0.848 - - - - - - 0.848 - - -
50. MMP13 ENSGALG00000017183 7 0.848 - - - - - - 0.848 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
51. EGR4 ENSGALG00000016086 4 0.848 - - - - - - 0.848 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
52. SPERT ENSGALG00000016981 145 0.848 - - - - - - 0.848 - - - spermatid associated [Source:NCBI gene;Acc:418848]
53. POLR1A ENSGALG00000038160 236 0.848 - - - - - - 0.848 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
54. ADAM23 ENSGALG00000008582 28 0.848 - - - - - - 0.848 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
55. FGA ENSGALG00000009266 291 0.848 - - - - - - 0.848 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
56. PLA2G1BL ENSGALG00000007236 4 0.848 - - - - - - 0.848 - - - phospholipase A2, major isoenzyme-like
57. DIRAS2 ENSGALG00000005323 11 0.848 - - - - - - 0.848 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
58. GLRA2 ENSGALG00000016571 10 0.848 - - - - - - 0.848 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
59. KCNV1 ENSGALG00000031449 64 0.848 - - - - - - 0.848 - - - potassium voltage-gated channel modifier subfamily V member 1
60. LOC427545 ENSGALG00000004428 3 0.848 - - - - - - 0.848 - - - histamine H3 receptor-like
61. FGD4 ENSGALG00000012932 50 0.848 - - - - - - 0.848 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
62. ZBTB11 ENSGALG00000015334 22 0.848 - - - - - - 0.848 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
63. LHX8 ENSGALG00000011369 77 0.848 - - - - - - 0.848 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
64. ST8SIA6 ENSGALG00000008671 8 0.848 - - - - - - 0.848 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
65. TRIM25 ENSGALG00000003144 12 0.848 - - - - - - 0.848 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
66. VRK2 ENSGALG00000032770 117 0.848 - - - - - - 0.848 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
67. ENSGALG00000027367 ENSGALG00000027367 7 0.848 - - - - - - 0.848 - - -
68. SH2D4A ENSGALG00000010122 206 0.846 - - - - - 0.846 - - - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
69. DLEC1 ENSGALG00000005826 23 0.845 - - - - - - - - - 0.845 DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
70. FABP2 ENSGALG00000011986 15 0.845 - - - - - - - - - 0.845 fatty acid binding protein 2 [Source:NCBI gene;Acc:422678]
71. ENSGALG00000021884 ENSGALG00000021884 29 0.845 - - - - - - - - - 0.845
72. ENSGALG00000025967 ENSGALG00000025967 7 0.845 - - - - - - - - - 0.845
73. DNAJC28 ENSGALG00000037414 6 0.845 - - - - - - - - - 0.845 DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
74. TMEM189 ENSGALG00000026906 14 0.845 - - - - - - - - - 0.845 transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
75. SNAPC4 ENSGALG00000044726 36 0.844 - - - - - - - - - 0.844 small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
76. PCNX PCNX 110 0.84 - - - - - - - - - 0.840
77. ATP6V0E1 10 0.837 - - - 0.837 - - - - - - ATPase H+ transporting V0 subunit e1
78. ANKRD40L ENSGALG00000026189 887 0.836 - - - - - - - - - 0.836 ankyrin repeat domain-containing protein 40-like, transcript variant X5
79. ENSGALG00000018372 ENSGALG00000018372 61 0.836 - - - 0.836 - - - - - -
80. STS ENSGALG00000016622 11 0.836 - - - - - - - - - 0.836 steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
81. GFAP ENSGALG00000000909 21 0.834 - - - - - - - - - 0.834 glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
82. BDH1 ENSGALG00000023601 8466 0.834 - - - - 0.834 - - - - - 3-hydroxybutyrate dehydrogenase, type 1
83. GUCY1B3 29 0.832 - - - - - - - - - 0.832 guanylate cyclase 1 soluble subunit beta, transcript variant X2
84. SNORA75 SNORA75 41 0.83 - - - - - - - - - 0.830
85. STK40 ENSGALG00000032925 340 0.829 - - - - - - - - - 0.829 serine/threonine kinase 40 [Source:NCBI gene;Acc:395120]
86. FBXO39 ENSGALG00000029322 212 0.822 - - - - - 0.822 - - - - F-box protein 39 [Source:HGNC Symbol;Acc:HGNC:28565]
87. CFD ENSGALG00000040832 222 0.822 - - - - - - - - - 0.822 complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
88. ENSGALG00000000865 ENSGALG00000000865 46 0.818 - - - - - - - - - 0.818
89. TRIM13 ENSGALG00000017011 92 0.815 - - - - - - - - - 0.815 tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
90. ACE ENSGALG00000000498 1398 0.813 - - - - - 0.813 - - - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
91. IGF2R ENSGALG00000011621 81 0.811 - - - - - - - - - 0.811 insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
92. ENSGALG00000027667 ENSGALG00000027667 12 0.809 - - - - - - - - - 0.809
93. CASR ENSGALG00000038405 53 0.809 - - - - - - - - - 0.809 calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
94. NUB1 ENSGALG00000006181 269 0.808 - - - - - - - - - 0.808 negative regulator of ubiquitin like proteins 1 [Source:NCBI gene;Acc:420433]
95. SCNN1G ENSGALG00000006270 178 0.805 - - - - - - - - - 0.805 sodium channel epithelial 1 gamma subunit [Source:HGNC Symbol;Acc:HGNC:10602]
96. MAP2K1 ENSGALG00000007687 250 0.804 - - - - - - - - - 0.804 mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
97. COPS8 ENSGALG00000033385 10166 0.802 - - - - - 0.802 - - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
98. ILDR2 ENSGALG00000015458 16 0.801 - - - - - - - - - 0.801 immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
99. OSCP1 ENSGALG00000002123 1129 0.801 - - - - - - - - - 0.801 organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
100. MIF4GD ENSGALG00000026715 41 0.798 - - - - - - - - - 0.798 MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]

There are 136 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA