Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MDH1B

Gene Name Gene ID Reads Annotation
MDH1B ENSDARG00000018008 29 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]










Genes with expression patterns similar to MDH1B

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MDH1B ENSDARG00000018008 29 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
2. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 2 1.000 - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
3. smarcd3b ENSDARG00000019969 11 2 1.000 - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
4. si:ch211-232m19.4 19 2 1.000 - 1.000 - - - - - - si:ch211-232m19.4
5. RAB1B RAB1B 20 1.873 - - 0.873 - - 1.000 - - -
6. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.858 1.000 - - - - - - - 0.858 misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
7. MAPK8IP1 MAPK8IP1 121 1.852 0.866 - - - - 0.986 - - -
8. GMIP ENSDARG00000077249 43 1.84 1.000 - - - - - - 0.840 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
9. mcm5_1 ENSDARG00000019507 10 1.832 1.000 - 0.832 - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
10. Metazoa_SRP_5 Metazoa_SRP_5 2 1.824 - - 0.824 - - 1.000 - - -
11. BX511061.2 BX511061.2 30 1.816 1.000 - - - - - - - 0.816
12. DNAI2 DNAI2 6 1.807 - - - - 0.807 1.000 - - -
13. SLC35A3_1 SLC35A3_1 35 1.789 - - - - 0.789 1.000 - - -
14. si:ch211-188c16.1 ENSDARG00000077288 16 1.78 - - - - 0.780 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
15. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1.779 0.779 - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
16. nipbla ENSDARG00000098272 26 1.775 1.000 - - - - - 0.775 - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
17. ARMC6 ENSDARG00000103770 39 1.756 1.000 - - - - - 0.756 - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
18. si:dkey-254e13.13 si:dkey-254e13.13 6 1.755 - - - - - 1.000 0.755 - -
19. col10a1 col10a1 19 1.755 - - - - - - - 0.953 0.802
20. ripply2 ENSDARG00000070535 18 1.741 - - - - 0.793 - - - 0.948 ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
21. guk1b ENSDARG00000005776 23 1.724 1.000 - - - - 0.724 - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
22. mlc1 ENSDARG00000063026 29 1.702 - - 0.873 - - 0.829 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
23. MAGI3 MAGI3 114 1.655 - - - - 0.773 - - 0.882 -
24. TNNC2 ENSDARG00000070835, ENSDARG00000111155 89 1.646 - - - - - - 0.719 0.927 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
25. neu3.5 ENSDARG00000096368 5 1.639 - - 0.873 0.766 - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
26. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1.637 0.705 - - - - - - 0.932 - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
27. si:ch211-131e11.14 si:ch211-131e11.14 7 1.632 0.825 - - - 0.807 - - - -
28. DNHD1 DNHD1 4 1.632 - - - - - 0.877 0.755 - -
29. CR847950.4 CR847950.4 25 1.606 0.739 - - - - - 0.867 - -
30. si:dkey-229d2.7 ENSDARG00000092460 15 1.603 - - 0.873 0.730 - - - - - si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
31. C23H1orf192 C23H1orf192 60 1.598 - - - 0.755 - - 0.843 - -
32. si:dkeyp-53d3.5 ENSDARG00000101542 171 1.589 - - - - - 0.877 - 0.712 - si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
33. CABZ01021538.1 CABZ01021538.1 67 1.583 0.824 - - - - 0.759 - - -
34. si:dkey-249p7.4 ENSDARG00000096663 9 1.575 - - 0.873 - - 0.702 - - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
35. MCOLN2 ENSDARG00000098918 12 1.572 0.705 - - 0.867 - - - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
36. THBS1 THBS1 6 1.562 - - - - 0.807 - 0.755 - -
37. CABZ01081747.2 CABZ01081747.2 9 1.557 - - 0.816 0.741 - - - - -
38. si:dkey-26g8.12 si:dkey-26g8.12 3 1.547 - - 0.792 - - - 0.755 - -
39. nkx2.2a ENSDARG00000053298 747 1.528 0.763 - - - - 0.765 - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
40. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1.523 - - - - 0.792 - - 0.731 - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
41. CABZ01064973.1 CABZ01064973.1 160 1.505 - - - - - - 0.781 0.724 -
42. pvrl3l pvrl3l 943 1.499 - - - - - - 0.725 0.774 -
43. rpph1 33 1.495 - - - - 0.793 0.702 - - - ribonuclease P RNA component H1
44. GPT_1 GPT_1 68 1.485 - - - - - - 0.746 - 0.739
45. ccdc173 ENSDARG00000077928 260 1.481 0.722 - - - 0.759 - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
46. pax6l pax6l 54 1.468 - - - - - 0.713 0.755 - -
47. CU571081.1 ENSDARG00000113329 171 1.461 0.704 - - - - - 0.757 - - C3a anaphylatoxin chemotactic receptor-like [Source:NCBI gene;Acc:101885604]
48. C5H5orf34 C5H5orf34 69 1.457 - - - - 0.711 0.746 - - -
49. robo4 ENSDARG00000009387 98 1.447 0.706 - - - - 0.741 - - - roundabout, axon guidance receptor, homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020809-1]
50. si:ch211-153f2.3 ENSDARG00000098980 66 1 - - - - - 1.000 - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
51. MDFI ENSDARG00000089564 8 1 1.000 - - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
52. eva1bb ENSDARG00000100698 223 1 1.000 - - - - - - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
53. CABZ01041604.1 ENSDARG00000059854 35 1 1.000 - - - - - - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
54. tgfa ENSDARG00000053939 1 1 1.000 - - - - - - - - transforming growth factor, alpha [Source:ZFIN;Acc:ZDB-GENE-040724-208]
55. CU638740.1 CU638740.1 398 1 1.000 - - - - - - - -
56. mir196b ENSDARG00000081346 35 1 - - - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
57. e2f5 ENSDARG00000038812 388 1 1.000 - - - - - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
58. sparcl1 ENSDARG00000074989 80 1 - - - - - 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
59. si:ch211-188i4.4 5 1 1.000 - - - - - - - - si:ch211-188i4.4, transcript variant X3
60. si:dkey-286j17.4 ENSDARG00000093402 1 1 - - - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
61. jakmip2 ENSDARG00000053547 32 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
62. si:ch211-12h2.7 si:ch211-12h2.7 1 1 - - - - - 1.000 - - -
63. INSM2 ENSDARG00000020655 122 1 - - - - - 1.000 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
64. LPL ENSDARG00000087697 18 1 1.000 - - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
65. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - 1.000 - - -
66. slc44a5a ENSDARG00000017398 5 1 - - - - - 1.000 - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
67. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1 - - - - - 1.000 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
68. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 1.000 - - - - - - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
69. si:dkey-222b8.4 ENSDARG00000057227 13 1 1.000 - - - - - - - - si:dkey-222b8.4 [Source:ZFIN;Acc:ZDB-GENE-060503-438]
70. zgc:174688 zgc:174688 170 1 1.000 - - - - - - - -
71. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f
72. FAM175B FAM175B 23 1 1.000 - - - - - - - -
73. EDN3_1 EDN3_1 24 1 - - - - - 1.000 - - -
74. ucn3l ENSDARG00000087241 29 1 1.000 - - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
75. CU896555.1 CU896555.1 27 1 - - - - - 1.000 - - -
76. l3mbtl3 ENSDARG00000025983 12 1 1.000 - - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
77. WSCD1 ENSDARG00000098113 35 1 - - - - - 1.000 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
78. BX537277.3 ENSDARG00000117762 1 1 - - - - - 1.000 - - -
79. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 1 - - - - - 1.000 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
80. PGBD4 ENSDARG00000079328 20 1 - - - - - 1.000 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
81. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - 1.000 - - -
82. CABZ01044085.1 CABZ01044085.1 3 1 1.000 - - - - - - - -
83. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
84. hcrt ENSDARG00000070932 4 1 1.000 - - - - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
85. si:dkey-176f19.5 si:dkey-176f19.5 10 1 1.000 - - - - - - - -
86. BX649498.2 BX649498.2 40 1 1.000 - - - - - - - -
87. sowah1 sowah1 1 1 1.000 - - - - - - - -
88. BX469915.2 BX469915.2 48 1 1.000 - - - - - - - -
89. si:ch211-150o20.5 si:ch211-150o20.5 1 1 1.000 - - - - - - - -
90. agxtb ENSDARG00000018478 2 1 - - - - - 1.000 - - - alanine--glyoxylate and serine--pyruvate aminotransferase b [Source:ZFIN;Acc:ZDB-GENE-010302-3]
91. cx28.8 ENSDARG00000071042 62 1 - - 1.000 - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
92. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
93. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
94. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
95. BX323793.4 BX323793.4 8 1 - - - - - 1.000 - - -
96. SLC22A7_1 SLC22A7_1 2 1 - - - - - 1.000 - - -
97. efemp2b ENSDARG00000020811 116 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
98. cntnap5a ENSDARG00000073920 39 1 - - - - - 1.000 - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
99. BX465203.1 ENSDARG00000113985 8 1 1.000 - - - - - - - -
100. CABZ01086292.1 CABZ01086292.1 1 1 - - - - - 1.000 - - -

There are 1077 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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