Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MDH1

Gene Name Gene ID Reads Annotation
MDH1 ENSGALG00000008858 44636 malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]











Genes with expression patterns similar to MDH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MDH1 ENSGALG00000008858 44636 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
2. RPS2 ENSGALG00000005490 293634 0.975 - - - - - - 0.975 - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
3. EMC2 ENSGALG00000040325 16227 0.954 - - - - - - 0.954 - - - ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
4. ATP5A1 ATP5A1 32367 0.933 - - - - - - 0.933 - - -
5. RPL9 ENSGALG00000000150 81866 0.911 - - - - - - 0.911 - - - ribosomal protein L9 [Source:NCBI gene;Acc:425468]
6. XPO5 ENSGALG00000010341 24765 0.898 - - - - - - 0.898 - - - exportin 5 [Source:NCBI gene;Acc:421450]
7. LRWD1 ENSGALG00000001852 13862 0.894 - - - - - - 0.894 - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
8. C13H5ORF15 C13H5ORF15 11559 0.89 - - - - - - 0.890 - - -
9. CSNK1D ENSGALG00000002719 19530 0.887 - - - - - - 0.887 - - - casein kinase 1 delta [Source:NCBI gene;Acc:417378]
10. OTUD6B ENSGALG00000041337 15657 0.881 - - - - - - 0.881 - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
11. MRPL35 ENSGALG00000022950 26070 0.879 - - - - - - 0.879 - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
12. NCBP1 ENSGALG00000002087 8907 0.877 - - - - - - 0.877 - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
13. GATC ENSGALG00000007195 8610 0.877 - - - - - - 0.877 - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
14. PSMC1 ENSGALG00000010675 20633 0.877 - - - - - - 0.877 - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
15. DNAJC8 ENSGALG00000000790 19405 0.877 - - - - - - 0.877 - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
16. CD2AP ENSGALG00000016720 8852 0.877 - - - - - - 0.877 - - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
17. AP3D1 ENSGALG00000000996 16143 0.876 - - - - - - 0.876 - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
18. RPN1 ENSGALG00000005907 25315 0.874 - - - - - - 0.874 - - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
19. EIF6 ENSGALG00000033993 14647 0.873 - - - - - - 0.873 - - - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
20. SLC25A4 ENSGALG00000010614 9970 0.871 - - - - - - 0.871 - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
21. C20H20ORF24 ENSGALG00000001054 22026 0.87 - - - - - - 0.870 - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
22. ZNF326 ENSGALG00000006113 15141 0.869 - - - - - - 0.869 - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
23. PPA2 ENSGALG00000010582 22301 0.869 - - - - - - 0.869 - - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
24. PCDH18 ENSGALG00000009732 6634 0.868 - - - - - - 0.868 - - - protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
25. SAT1 ENSGALG00000016348 8469 0.864 - - - - - - 0.864 - - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
26. ENPP2 ENSGALG00000032746 6086 0.863 - - - - - - 0.863 - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
27. DYL1 ENSGALG00000007153 94287 0.862 - - - - - - 0.862 - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
28. CMIP ENSGALG00000038494 5016 0.862 - - - - - - 0.862 - - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
29. NPEPL1 ENSGALG00000007533 5908 0.861 - - - - - - 0.861 - - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
30. EIF2AK1 ENSGALG00000003391 3381 0.861 - - - - - - 0.861 - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
31. ING4 ENSGALG00000014457 5561 0.859 - - - - - - 0.859 - - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
32. GNL2 ENSGALG00000001973 10148 0.859 - - - - - - 0.859 - - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
33. MTFR1 ENSGALG00000038385 9419 0.859 - - - - - - 0.859 - - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
34. NOLC1 ENSGALG00000041124 12765 0.858 - - - - - - 0.858 - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
35. C9orf78 ENSGALG00000004152 7140 0.857 - - - - - - 0.857 - - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
36. E2F1 ENSGALG00000003045 5604 0.855 - - - - - - 0.855 - - - E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
37. ACAD11 ENSGALG00000035949 5483 0.854 - - - - - - 0.854 - - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
38. BLZF1 ENSGALG00000015225 3594 0.854 - - - - - - 0.854 - - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
39. SNX27 ENSGALG00000040687 3221 0.853 - - - - - - 0.853 - - - sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
40. MAD2L1BP ENSGALG00000027871 7835 0.853 - - - - - - 0.853 - - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
41. MED18 ENSGALG00000028149 2684 0.853 - - - - - - 0.853 - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
42. ITPK1 ENSGALG00000034898 4212 0.852 - - - - - - 0.852 - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
43. IDH2 ENSGALG00000034434 18307 0.851 - - - - - - 0.851 - - - isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
44. TASP1 ENSGALG00000009057 1295 0.849 - - - - - - 0.849 - - - taspase 1 [Source:NCBI gene;Acc:416741]
45. FURIN ENSGALG00000008341 2609 0.849 - - - - - - 0.849 - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
46. TET3 ENSGALG00000037860 3129 0.848 - - - - - - 0.848 - - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
47. KBTBD4 ENSGALG00000008089 1799 0.848 - - - - - - 0.848 - - - kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
48. ENSGALG00000029084 ENSGALG00000029084 890 0.847 - - - - - - 0.847 - - -
49. PRDM15 ENSGALG00000019178 2729 0.847 - - - - - - 0.847 - - - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
50. GNB1 ENSGALG00000001334 52398 0.815 - - - - - - 0.815 - - - G protein subunit beta 1 [Source:NCBI gene;Acc:419402]
51. TCF12 ENSGALG00000004304 63081 0.811 - - - - - - 0.811 - - - transcription factor 12 [Source:NCBI gene;Acc:396334]
52. SHFM1 SHFM1 51606 0.796 - - - - - - 0.796 - - -
53. RPL19 ENSGALG00000001658 277294 0.782 - - - - 0.782 - - - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
54. HSP90B1 ENSGALG00000033789 58910 0.768 - - - - - 0.768 - - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
55. PDHA1 ENSGALG00000016430 7070 0.752 - - - - - - - - - 0.752 pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
56. FTH FTH 121430 0.737 - - - - - - 0.737 - - -
57. ATP5G3 168626 0.727 - 0.727 - - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
58. ENSGALG00000004711 ENSGALG00000004711 7347 0.727 - - - - - 0.727 - - - -
59. RNF4 ENSGALG00000015668 15780 0.719 - - - - - - - 0.719 - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
60. RPA2 39663 0.719 - - - - - - - 0.719 - - replication protein A2
61. TACC3 ENSGALG00000015709 17336 0.71 - 0.710 - - - - - - - - transforming acidic coiled-coil containing protein 3 [Source:NCBI gene;Acc:422899]
62. NIP7 ENSGALG00000000650 23932 0.709 - - - - - 0.709 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
63. RPS3 ENSGALG00000017330 212566 0.709 - - - - - - - 0.709 - - ribosomal protein S3 [Source:NCBI gene;Acc:419069]
64. PPA1 ENSGALG00000004442 33355 0.704 - - - - 0.704 - - - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
65. KDM5B ENSGALG00000038948 50645 0.702 - - - - - 0.702 - - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
66. DDX3X ENSGALG00000016231 54230 0.702 - - - - 0.702 - - - - - DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:418567]
67. DDX5 ENSGALG00000003532 75471 0.702 - 0.702 - - - - - - - - DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
68. PPP4R2 ENSGALG00000007810 15127 0.701 - - - - - 0.701 - - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA