Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MCPH1

Gene Name Gene ID Reads Annotation
MCPH1 ENSGALG00000016332 2097 microcephalin 1 [Source:NCBI gene;Acc:100125976]











Genes with expression patterns similar to MCPH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MCPH1 ENSGALG00000016332 2097 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 microcephalin 1 [Source:NCBI gene;Acc:100125976]
2. FANCL ENSGALG00000030022 7423 2.274 - - - - - - 0.707 0.735 - 0.832 FA complementation group L [Source:NCBI gene;Acc:421202]
3. SSR2 ENSGALG00000000764 32190 1.654 - - - - - - - 0.772 - 0.882 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
4. PAK1IP1 ENSGALG00000012724 10907 1.64 - - - - - - - 0.823 - 0.817 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
5. EMP2 ENSGALG00000027058 3925 1.63 - - - - - - 0.751 - - 0.879 epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
6. AFG3L2 ENSGALG00000013853 1138 1.627 - - - - - - 0.723 - - 0.904 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
7. CXADR ENSGALG00000015701 96 1.623 - - - - - - 0.713 - - 0.910 coxsackie virus and adenovirus receptor, transcript variant X2
8. KIF11 ENSGALG00000030597 5528 1.614 - - - - - - - 0.725 - 0.889 kinesin family member 11 [Source:NCBI gene;Acc:423809]
9. ANAPC7 ENSGALG00000003826 5484 1.599 - - - - - - 0.813 0.786 - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
10. C10orf118 C10orf118 762 1.59 - - - - - - 0.702 - - 0.888
11. CHRAC1 ENSGALG00000040823 5695 1.572 - - - - - - - 0.753 - 0.819 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
12. SLC12A4 ENSGALG00000034179 5674 1.565 - - - - - - - 0.709 - 0.856 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
13. EXOSC1 ENSGALG00000039917 5259 1.562 - - - - - - 0.779 - - 0.783 exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
14. NDC80 ENSGALG00000014801 3237 1.561 - - - - - - 0.762 - - 0.799 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
15. RBBP8 ENSGALG00000014982 3255 1.555 - - - - - - 0.750 - - 0.805 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
16. GPR162 ENSGALG00000022926 7181 1.55 - - - - - - - 0.782 - 0.768 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
17. EBNA1BP2 ENSGALG00000009045 17453 1.545 - - - - - - 0.707 - - 0.838 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
18. LSM6 ENSGALG00000009985 18582 1.542 - - - - - - 0.733 - - 0.809 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
19. ENSGALG00000026433 ENSGALG00000026433 14463 1.541 - - - - - - - 0.714 - 0.827
20. SLC39A6 ENSGALG00000013209 1754 1.516 - - - - - - 0.734 - - 0.782 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
21. C10ORF58 C10ORF58 5045 1.515 - - - - - - 0.754 - - 0.761
22. FBXO5 ENSGALG00000013607 6156 1.51 - - - - - - 0.720 - - 0.790 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
23. SMDT1 ENSGALG00000011897 9360 1.509 - - - - - - 0.711 - - 0.798 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
24. CSRP2BP CSRP2BP 4679 1.502 - - - - - - 0.710 - - 0.792
25. NUBP1 ENSGALG00000007241 3791 1.499 - - - - - - - 0.768 - 0.731 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
26. LY6E ENSGALG00000041621 16227 1.496 - - - - - - 0.727 - - 0.769 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
27. TMX4 ENSGALG00000028587 3513 1.492 - - - - - - - 0.727 - 0.765 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
28. IARS ENSGALG00000004813 12936 1.49 - - - - - - 0.766 0.724 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
29. CDCA7 ENSGALG00000040833 7484 1.48 - - - - - - 0.700 - - 0.780 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
30. SDF2L1 ENSGALG00000031982 6084 1.468 - - - - - - 0.705 0.763 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
31. LGALS1 ENSGALG00000012420 13993 1.463 - - - - - - 0.723 - - 0.740 galectin 1 [Source:NCBI gene;Acc:396491]
32. MKRN1 ENSGALG00000012852 6907 1.459 - - - - - - - 0.746 - 0.713 makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
33. C18orf21 ENSGALG00000013131 2816 1.456 - - - - - - 0.756 0.700 - - chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:28802]
34. PSAT1 ENSGALG00000015180 4752 1.452 - - - - - - 0.738 0.714 - - phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]
35. AGPS ENSGALG00000009236 2250 0.939 - - - - - - - - - 0.939 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
36. MAN1A2 451 0.939 - - - - - - - - - 0.939 mannosidase alpha class 1A member 2
37. CP ENSGALG00000030773 119 0.938 - - - - - - - - - 0.938 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
38. RSPO2 ENSGALG00000030030 1271 0.931 - - - - - - - - - 0.931 R-spondin 2 [Source:NCBI gene;Acc:420271]
39. STRADA ENSGALG00000000550 6912 0.931 - - - - - - - - - 0.931 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
40. HOTAIRM1 HOTAIRM1 4335 0.929 - - - - - - - - - 0.929
41. TXNDC11 ENSGALG00000003154 2224 0.927 - - - - - - - - - 0.927 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
42. MTERFD1 MTERFD1 3640 0.926 - - - - - - - - - 0.926
43. NARS ENSGALG00000040506 9506 0.925 - - - - - - - - - 0.925 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
44. TMEM128 ENSGALG00000014992 6567 0.925 - - - - - - - - - 0.925 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
45. RAD50 ENSGALG00000006794 4308 0.925 - - - - - - - - - 0.925 RAD50 double strand break repair protein, transcript variant X4
46. NCAPG2 ENSGALG00000006525 2319 0.923 - - - - - - - - - 0.923 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
47. AGGF1 ENSGALG00000004311 3011 0.923 - - - - - - - - - 0.923 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
48. APBA3 ENSGALG00000000740 1249 0.922 - - - - - - - - - 0.922 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
49. SPTSSA ENSGALG00000025755 3361 0.921 - - - - - - - - - 0.921 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
50. MB21D1 2460 0.921 - - - - - - - - - 0.921 Mab-21 domain containing 1
51. QKI ENSGALG00000011555 1275 0.92 - - - - - - - - - 0.920 QKI, KH domain containing RNA binding [Source:NCBI gene;Acc:374204]
52. DCAF5 ENSGALG00000009463 1297 0.919 - - - - - - - - - 0.919 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
53. PROM1 ENSGALG00000014496 2494 0.919 - - - - - - - - - 0.919 prominin 1 [Source:NCBI gene;Acc:422825]
54. DIAPH3 ENSGALG00000016937 1069 0.919 - - - - - - - - - 0.919 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
55. MYOCD ENSGALG00000001021 351 0.918 - - - - - - - - - 0.918 myocardin [Source:NCBI gene;Acc:427790]
56. BRD1 ENSGALG00000029379 6047 0.917 - - - - - - - - - 0.917 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
57. SOX6 ENSGALG00000006074 102 0.915 - - - - - - - - - 0.915 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
58. SSH1 ENSGALG00000004928 222 0.915 - - - - - - - - - 0.915 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
59. SLC2A3 SLC2A3 527 0.914 - - - - - - - - - 0.914
60. MSI1 ENSGALG00000007227 2279 0.914 - - - - - - - - - 0.914 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
61. FASTKD3 ENSGALG00000033521 1186 0.913 - - - - - - - - - 0.913 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
62. IL10R2 IL10R2 72 0.913 - - - - - - - - - 0.913
63. HDHD1 HDHD1 2928 0.913 - - - - - - - - - 0.913
64. HSPE1 ENSGALG00000009070 87567 0.913 - - - - - - - - - 0.913 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
65. PRDM4 ENSGALG00000012619 876 0.912 - - - - - - - - - 0.912 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
66. SVIL ENSGALG00000007331 12032 0.912 - - - - - - - - - 0.912 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
67. MTSS1 ENSGALG00000041969 1312 0.911 - - - - - - - - - 0.911 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
68. FAM190B FAM190B 165 0.911 - - - - - - - - - 0.911
69. NDUFA4 ENSGALG00000025999 53323 0.911 - - - - - - - - - 0.911 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
70. TPX2 ENSGALG00000006267 26087 0.911 - - - - - - - - - 0.911 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
71. 5S_2 5S_2 58 0.911 - - - - - - - - - 0.911
72. PDPN ENSGALG00000030096 647 0.911 - - - - - - - - - 0.911 podoplanin, transcript variant X4
73. HM13 ENSGALG00000006207 8354 0.91 - - - - - - - - - 0.910 histocompatibility minor 13 [Source:HGNC Symbol;Acc:HGNC:16435]
74. RWDD2B ENSGALG00000015807 3601 0.91 - - - - - - - - - 0.910 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
75. CPNE2 ENSGALG00000001316 236 0.91 - - - - - - - - - 0.910 copine 2 [Source:NCBI gene;Acc:415646]
76. INTS10 ENSGALG00000010130 6320 0.91 - - - - - - - - - 0.910 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
77. ITSN2 ENSGALG00000016504 651 0.91 - - - - - - - - - 0.910 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
78. PLA2G15 ENSGALG00000041787 762 0.91 - - - - - - - - - 0.910 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
79. AURKA ENSGALG00000007768 793 0.91 - - - - - - - - - 0.910 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
80. GTF3C1 ENSGALG00000007387 5788 0.909 - - - - - - - - - 0.909 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
81. FAM193A ENSGALG00000015667 3075 0.909 - - - - - - - - - 0.909 family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
82. ZNF6 ZNF6 138 0.909 - - - - - - - - - 0.909
83. ANXA6 ENSGALG00000004357 2891 0.908 - - - - - - - - - 0.908 annexin A6 [Source:NCBI gene;Acc:395481]
84. QDPR ENSGALG00000030070 6953 0.907 - - - - - - - - - 0.907 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
85. FAM129A ENSGALG00000004812 269 0.907 - - - - - - - - - 0.907 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
86. ITGA9 ENSGALG00000029378 415 0.906 - - - - - - - - - 0.906 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
87. CNTRL ENSGALG00000001513 1773 0.906 - - - - - - - - - 0.906 centriolin [Source:NCBI gene;Acc:417121]
88. WDSUB1 ENSGALG00000012574 2038 0.906 - - - - - - - - - 0.906 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
89. CASKIN1 604 0.906 - - - - - - - - - 0.906 CASK interacting protein 1, transcript variant X4
90. ASB3 ENSGALG00000008176 5422 0.905 - - - - - - - - - 0.905 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
91. PGD ENSGALG00000002797 15115 0.905 - - - - - - - - - 0.905 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
92. ENSGALG00000005389 ENSGALG00000005389 553 0.904 - - - - - - - - - 0.904
93. USP24 ENSGALG00000010805 576 0.904 - - - - - - - - - 0.904 ubiquitin specific peptidase 24 [Source:HGNC Symbol;Acc:HGNC:12623]
94. WHSC1 1712 0.904 - - - - - - - - - 0.904 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
95. PCLO 249 0.904 - - - - - - - - - 0.904 piccolo presynaptic cytomatrix protein
96. CCDC51 ENSGALG00000006465 1845 0.903 - - - - - - - - - 0.903 coiled-coil domain containing 51, transcript variant X1
97. 5 5 4209 0.903 - - - - - - - - - 0.903
98. TLL1 ENSGALG00000009567 1821 0.902 - - - - - - - - - 0.902 tolloid like 1 [Source:NCBI gene;Acc:395441]
99. CPT2 ENSGALG00000010681 3211 0.902 - - - - - - - - - 0.902 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
100. CCT8 ENSGALG00000015821 12161 0.902 - - - - - - - - - 0.902 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]

There are 618 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA