Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MCM8

Gene Name Gene ID Reads Annotation
MCM8 ENSDARG00000074326 128 minichromosome maintenance 8 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-120927-1]










Genes with expression patterns similar to MCM8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MCM8 ENSDARG00000074326 128 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 minichromosome maintenance 8 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-120927-1]
2. C9HXorf36 C9HXorf36 44 1.667 - 0.828 - - - - 0.839 - -
3. hbae1 14666 1.54 - 0.712 - - - 0.828 - - - hemoglobin, alpha embryonic 1
4. ephx1 ENSDARG00000042854 161 1.529 - 0.759 - - - 0.770 - - - epoxide hydrolase 1, microsomal (xenobiotic) [Source:ZFIN;Acc:ZDB-GENE-040426-913]
5. grk1a ENSDARG00000058803 13 1.529 - - - - - 0.794 0.735 - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
6. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.527 - 0.726 - - 0.801 - - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
7. ppp1r3da ENSDARG00000077513 109 1.489 0.717 - - - - 0.772 - - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
8. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 0.962 - - - - - 0.962 - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
9. si:ch211-251p5.3 si:ch211-251p5.3 39 0.962 - - - - - 0.962 - - -
10. mfi2 224 0.962 - - - - - 0.962 - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
11. si:ch211-245h7.2 si:ch211-245h7.2 317 0.95 - - - - - 0.950 - - -
12. vav3b ENSDARG00000073713, ENSDARG00000075962 26 0.95 - - - - - 0.950 - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
13. klfd klfd 625 0.934 - - - - - 0.934 - - -
14. NUDT7 ENSDARG00000070387 32 0.921 - - - - - 0.921 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 7 [Source:ZFIN;Acc:ZDB-GENE-131127-212]
15. epb41b ENSDARG00000029019 1472 0.919 - - - - - 0.919 - - - erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
16. hbl3 11 0.917 - - - - - 0.917 - - - hexose-binding lectin 3, transcript variant X1
17. znfl2a ENSDARG00000008333 357 0.913 - - - - - 0.913 - - - zinc finger-like gene 2a [Source:ZFIN;Acc:ZDB-GENE-030828-7]
18. mir451a 131 0.911 - - - - - 0.911 - - - microRNA 451a
19. zgc:136858 ENSDARG00000070830 165 0.91 - 0.910 - - - - - - - zgc:136858 [Source:ZFIN;Acc:ZDB-GENE-060421-6632]
20. slco2b1 ENSDARG00000054609 68 0.909 - - - - - 0.909 - - - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
21. notchl ENSDARG00000088308 28 0.907 - - - - - 0.907 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
22. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 0.907 - - - - - 0.907 - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
23. bbs9 ENSDARG00000079217 4 0.907 - - - - - 0.907 - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
24. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 0.907 - - - - - 0.907 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
25. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 0.907 - - - - - 0.907 - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
26. si:ch211-214c20.1 ENSDARG00000088082, ENSDARG00000091381 1 0.907 - - - - - 0.907 - - - si:ch211-214c20.1 [Source:ZFIN;Acc:ZDB-GENE-081103-49]
27. C11H3orf83 C11H3orf83 30 0.907 - - - - - 0.907 - - -
28. cdc25d ENSDARG00000075599 7 0.907 - - - - - 0.907 - - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
29. viml ENSDARG00000044501 5 0.907 - - - - - 0.907 - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
30. CR352230.1 CR352230.1 1 0.907 - - - - - 0.907 - - -
31. rhd ENSDARG00000002194 269 0.907 - - - - - 0.907 - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
32. CU302316.1 ENSDARG00000109600 2 0.907 - - - - - 0.907 - - -
33. ftr26_1 ENSDARG00000092961 1 0.907 - - - - - 0.907 - - - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
34. CABZ01016332.1 CABZ01016332.1 5 0.907 - - - - - 0.907 - - -
35. ovca2 ENSDARG00000103748 38 0.907 - - - - - 0.907 - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
36. si:dkey-56m15.1 si:dkey-56m15.1 1 0.907 - - - - - 0.907 - - -
37. si:dkey-261j4.4 ENSDARG00000035150 32 0.907 - - - - - 0.907 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
38. rest ENSDARG00000103046 51 0.907 - - - - - 0.907 - - - RE1-silencing transcription factor [Source:ZFIN;Acc:ZDB-GENE-080415-1]
39. CR394546.2 ENSDARG00000090061 3 0.907 - - - - - 0.907 - - -
40. CR854855.2 CR854855.2 1 0.907 - - - - - 0.907 - - -
41. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.907 - - - - - 0.907 - - - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
42. zgc:163061_1 ENSDARG00000075538, ENSDARG00000076766 18 0.907 - - - - - 0.907 - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
43. tmem237a ENSDARG00000041735 13 0.907 - - - - - 0.907 - - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
44. CT027762.3_1 CT027762.3_1 62 0.907 - - - - - 0.907 - - -
45. KCNH2 KCNH2 1 0.907 - - - - - 0.907 - - -
46. fam169b ENSDARG00000069321 5 0.907 - - - - - 0.907 - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
47. CABZ01033130.1 CABZ01033130.1 5 0.907 - - - - - 0.907 - - -
48. anpepa ENSDARG00000041083, ENSDARG00000111591 5 0.907 - - - - - 0.907 - - - alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
49. U1_41 U1_41 1 0.907 - - - - - 0.907 - - -
50. slc5a12 ENSDARG00000005004 15 0.907 - - - - - 0.907 - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
51. si:ch211-235f1.3 ENSDARG00000095179 27 0.907 - - - - - 0.907 - - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
52. GPR35_1 GPR35_1 1 0.907 - - - - - 0.907 - - -
53. cryaa ENSDARG00000053502, ENSDARG00000113469 80 0.907 - - - - - 0.907 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
54. CR847893.4 CR847893.4 2 0.907 - - - - - 0.907 - - -
55. DPEP1 ENSDARG00000068181 1 0.907 - - - - - 0.907 - - - dipeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-388]
56. il13 ENSDARG00000077809 8 0.907 - - - - - 0.907 - - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
57. CABZ01071407.1 CABZ01071407.1 6 0.907 - - - - - 0.907 - - -
58. SYDE1 ENSDARG00000077440 4 0.907 - - - - - 0.907 - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
59. GP9 ENSDARG00000090638 53 0.907 - - - - - 0.907 - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
60. dpagt1 ENSDARG00000061061 3 0.907 - - - - - 0.907 - - - dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) [Source:ZFIN;Acc:ZDB-GENE-060526-18]
61. dkk2 ENSDARG00000076420 553 0.907 - - - - - 0.907 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
62. PATL2 PATL2 10 0.907 - - - - - 0.907 - - -
63. zgc:174712 zgc:174712 47 0.907 - - - - - 0.907 - - -
64. cx23 ENSDARG00000054150 115 0.907 - - - - - 0.907 - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
65. mhc1uma ENSDARG00000039164 16 0.907 - - - - - 0.907 - - - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
66. CMAS CMAS 10 0.907 - - - - - 0.907 - - -
67. runx2b ENSDARG00000059233 106 0.906 - - - - - 0.906 - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
68. GPR158 GPR158 64 0.905 - - - - - 0.905 - - -
69. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.901 - - - - - 0.901 - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
70. gata1a ENSDARG00000013477, ENSDARG00000117116 902 0.898 - - - - - 0.898 - - - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
71. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 0.885 - 0.885 - - - - - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
72. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 0.878 - 0.878 - - - - - - - tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
73. C6H21orf58 C6H21orf58 14 0.877 - - - - - 0.877 - - -
74. AL935210.1 ENSDARG00000088330 24618 0.875 - - - - - 0.875 - - - hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
75. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 0.873 - - - - - 0.873 - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
76. rgs17 ENSDARG00000039435 590 0.871 - 0.871 - - - - - - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
77. BX649498.2 BX649498.2 40 0.871 - - - - - - 0.871 - -
78. C12H10orf107 C12H10orf107 8 0.866 - - - - - 0.866 - - -
79. MIB1 ENSDARG00000102184 3285 0.866 - 0.866 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
80. kcnt1 ENSDARG00000079484 45 0.863 - - - - - 0.863 - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
81. scarf1 ENSDARG00000077285 108 0.861 - - - - - 0.861 - - - scavenger receptor class F, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8778]
82. SCYL1_1 SCYL1_1 209 0.861 - - - - - 0.861 - - -
83. SLC10A7 ENSDARG00000104508 996 0.859 - 0.859 - - - - - - - solute carrier family 10, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-5]
84. CT583679.2 CT583679.2 10 0.857 - - - - - 0.857 - - -
85. CUZD1 CUZD1 2 0.857 - - - - - 0.857 - - -
86. CABZ01066695.1 CABZ01066695.1 12 0.857 - - - - - 0.857 - - -
87. zgc:152977 ENSDARG00000077178 59 0.857 - - - - - 0.857 - - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
88. CACNA1H CACNA1H 34 0.857 - - - - - 0.857 - - -
89. APH1A APH1A 129 0.856 - - - - - 0.856 - - -
90. bnip2 ENSDARG00000013397 206 0.853 - - - - - 0.853 - - - BCL2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040109-6]
91. ptger1a ENSDARG00000078605 312 0.85 - 0.850 - - - - - - - prostaglandin E receptor 1a (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120215-261]
92. nt5c2l1 ENSDARG00000034852 1014 0.848 - - - - - 0.848 - - - 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
93. sh3bp5la ENSDARG00000019160 441 0.847 - 0.847 - - - - - - - SH3-binding domain protein 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-2187]
94. mtap ENSDARG00000037261 610 0.846 - 0.846 - - - - - - - methylthioadenosine phosphorylase [Source:ZFIN;Acc:ZDB-GENE-040426-1505]
95. epor_1 ENSDARG00000090834 366 0.845 - - - - - 0.845 - - - erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
96. hbae3 ENSDARG00000079305 100050 0.845 - - - - - 0.845 - - - hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
97. CU184832.2 CU184832.2 35 0.845 - - - - - 0.845 - - -
98. gclm ENSDARG00000018953 1712 0.845 - 0.845 - - - - - - - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
99. kal1b kal1b 495 0.844 - - - - - 0.844 - - -
100. gpr63 ENSDARG00000074540 242 0.844 0.844 - - - - - - - - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]

There are 445 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA