Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MCM4

Gene Name Gene ID Reads Annotation
MCM4 ENSGALG00000012915 13151 minichromosome maintenance complex component 4











Genes with expression patterns similar to MCM4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MCM4 ENSGALG00000012915 13151 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - minichromosome maintenance complex component 4
2. CREPT CREPT 17142 2.774 - - - - 0.983 - 0.896 0.895 - -
3. PUF60 ENSGALG00000039901 26902 1.795 - - - - 0.976 - - 0.819 - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
4. SEC63 ENSGALG00000015308 11596 1.785 - - - - 0.962 - - 0.823 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
5. TBC1D7 ENSGALG00000012731 4891 1.784 - - - - 0.982 - - 0.802 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
6. UTP3 ENSGALG00000011553 8814 1.763 - - - - - - 0.889 0.874 - - UTP3, small subunit processome component homolog (S. cerevisiae)
7. MRPS11 ENSGALG00000006777 16009 1.761 - - - - 0.983 - 0.778 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
8. RILPL2 ENSGALG00000003321 5632 1.736 - - - - 0.973 - 0.763 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
9. KCTD9 ENSGALG00000000275 3455 1.732 - - - - 0.976 - 0.756 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
10. SNX12 ENSGALG00000005659 9503 1.663 - - - - 0.858 - - 0.805 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
11. OGFOD1 6926 1.66 - - - - - - 0.777 0.883 - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
12. COPE ENSGALG00000003153 19444 1.654 - - - - - - 0.800 0.854 - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
13. WBP11 ENSGALG00000011745 11182 1.637 - - - - 0.855 - 0.782 - - - WW domain binding protein 11, transcript variant X1
14. FAM96B 14435 1.625 - - - - - - 0.875 0.750 - - family with sequence similarity 96 member B
15. XRN1 ENSGALG00000002706 4014 1.617 - - - - - - 0.758 0.859 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
16. SIRT1 ENSGALG00000002761 9028 1.581 - - - - - - 0.782 0.799 - - sirtuin 1 [Source:NCBI gene;Acc:423646]
17. RBM12B ENSGALG00000035129 4314 1.58 - - - - - - 0.775 0.805 - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
18. COL4A1 ENSGALG00000036798 12749 1.542 - - - - - - 0.782 0.760 - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
19. UPF1 ENSGALG00000003220 9496 1.53 - - - - - - 0.763 0.767 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
20. CCDC59 ENSGALG00000028648 9272 0.987 - - - - 0.987 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
21. MYEOV2 MYEOV2 5155 0.985 - - - - 0.985 - - - - -
22. AGPAT3 ENSGALG00000031932 6903 0.984 - - - - 0.984 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
23. NDST2 ENSGALG00000005107 4224 0.984 - - - - 0.984 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
24. WHSC1L1 4065 0.984 - - - - 0.984 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
25. MRPL22 ENSGALG00000003919 2760 0.984 - - - - 0.984 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
26. NUP37 ENSGALG00000012759 9985 0.984 - - - - 0.984 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
27. HMGB3 ENSGALG00000009071 12011 0.984 - - - - 0.984 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
28. CENPE ENSGALG00000013208 12337 0.983 - - - - 0.983 - - - - - centromere protein E, transcript variant X4
29. EPB41L1 ENSGALG00000034171 3616 0.983 - - - - 0.983 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
30. NOL6 ENSGALG00000030730 7191 0.983 - - - - 0.983 - - - - - nucleolar protein 6
31. USP1 ENSGALG00000010957 8297 0.983 - - - - 0.983 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
32. TMEM18 ENSGALG00000028744 11779 0.983 - - - - 0.983 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
33. PHKA1 ENSGALG00000004801 2510 0.982 - - - - 0.982 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
34. MAP1B ENSGALG00000014999 6288 0.982 - - - - 0.982 - - - - - microtubule associated protein 1B
35. MED1 ENSGALG00000001708 9556 0.982 - - - - 0.982 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
36. SEC61A2 ENSGALG00000036300 4235 0.982 - - - - 0.982 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
37. MRPL46 ENSGALG00000006782 5033 0.982 - - - - 0.982 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
38. RNF113A ENSGALG00000000538 3985 0.982 - - - - 0.982 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
39. gga-mir-6584 ENSGALG00000028834 1481 0.982 - - - - 0.982 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
40. HTRA3 ENSGALG00000034673 512 0.981 - - - - 0.981 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
41. LUC7L2 ENSGALG00000036238 11817 0.981 - - - - 0.981 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
42. TBRG4 ENSGALG00000038102 9269 0.981 - - - - 0.981 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
43. M6PR ENSGALG00000031681 9442 0.981 - - - - 0.981 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
44. RAE1 ENSGALG00000007653 8930 0.981 - - - - 0.981 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
45. NSG1 ENSGALG00000015010 5829 0.981 - - - - 0.981 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
46. IBA57 ENSGALG00000005328 4362 0.981 - - - - 0.981 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
47. TM2D2 ENSGALG00000003356 7088 0.981 - - - - 0.981 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
48. TMEM39B ENSGALG00000003287 4125 0.981 - - - - 0.981 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
49. HOXB3 ENSGALG00000043219 5198 0.981 - - - - 0.981 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
50. SPG21 ENSGALG00000007262 8050 0.981 - - - - 0.981 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
51. ABCC1 ENSGALG00000006646 2596 0.98 - - - - 0.980 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
52. DNAJC2 ENSGALG00000008249 28064 0.98 - - - - 0.980 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
53. BCL9 ENSGALG00000037655 4620 0.98 - - - - 0.980 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
54. INCENP ENSGALG00000007537 16617 0.979 - - - - 0.979 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
55. ETF1 ENSGALG00000002262 14560 0.979 - - - - 0.979 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
56. PPAPDC1B PPAPDC1B 6698 0.979 - - - - 0.979 - - - - -
57. TRIM33 ENSGALG00000001976 7404 0.979 - - - - 0.979 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
58. C4orf27 C4orf27 16724 0.979 - - - - 0.979 - - - - -
59. OPTC ENSGALG00000003554 3698 0.979 - - - - 0.979 - - - - - opticin [Source:NCBI gene;Acc:395130]
60. THBS1 ENSGALG00000009626 3521 0.978 - - - - 0.978 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
61. SAMM50 ENSGALG00000014194 20437 0.977 - - - - 0.977 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
62. RAB21 ENSGALG00000010183 7718 0.977 - - - - 0.977 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
63. HYOU1 ENSGALG00000007659 3555 0.977 - - - - 0.977 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
64. C15H12ORF49 C15H12ORF49 13250 0.977 - - - - 0.977 - - - - -
65. FAM98A ENSGALG00000010428 9585 0.976 - - - - 0.976 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
66. RALB ENSGALG00000026493 14590 0.975 - - - - 0.975 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
67. VPS8 ENSGALG00000006704 5419 0.974 - - - - 0.974 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
68. MORN4 ENSGALG00000006149 7772 0.974 - - - - 0.974 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
69. OAF ENSGALG00000006715 12518 0.973 - - - - 0.973 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
70. UQCRC2 ENSGALG00000002490 23477 0.973 - - - - 0.973 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
71. TNPO3 ENSGALG00000039420 5178 0.973 - - - - 0.973 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
72. BRP44L BRP44L 30452 0.972 - - - - 0.972 - - - - -
73. PGAM5 ENSGALG00000002137 7700 0.97 - - - - 0.970 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
74. ESRP2 ENSGALG00000003374 4436 0.97 - - - - 0.970 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
75. TCF7L2 ENSGALG00000008883 13688 0.966 - - - - 0.966 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
76. CDC5L ENSGALG00000016704 22893 0.963 - - - - 0.963 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
77. EPFIP1L ENSGALG00000007683 18050 0.962 - - - - 0.962 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
78. RBM26 ENSGALG00000016910 13769 0.962 - - - - 0.962 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
79. PSMD14 ENSGALG00000011128 13335 0.962 - - - - 0.962 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
80. MTF2 ENSGALG00000043087 15225 0.961 - - - - 0.961 - - - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
81. ENSGALG00000026041 ENSGALG00000026041 13390 0.96 - - - - 0.960 - - - - -
82. UBE2G2 ENSGALG00000005667 12689 0.959 - - - - 0.959 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
83. SMNDC1 ENSGALG00000008561 14415 0.958 - - - - 0.958 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
84. ABCF2 ENSGALG00000034573 15639 0.958 - - - - 0.958 - - - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
85. FUNDC1 ENSGALG00000028187 10511 0.953 - - - - - - 0.953 - - - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
86. SMC3 ENSGALG00000008585 16618 0.952 - - - - 0.952 - - - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
87. EIF3H ENSGALG00000040522 39919 0.952 - - - - 0.952 - - - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
88. ENSGALG00000000360 ENSGALG00000000360 15320 0.946 - - - - 0.946 - - - - -
89. ZEB1 ENSGALG00000007260 9277 0.946 - - - - 0.946 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
90. EIF3L ENSGALG00000012296 42627 0.945 - - - - 0.945 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
91. RPS6 ENSGALG00000015082 307412 0.944 - - - - 0.944 - - - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
92. CWC22 ENSGALG00000009001 5984 0.943 - - - - 0.943 - - - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
93. MAGOH 28688 0.932 - - - - - - 0.932 - - - mago homolog, exon junction complex core component
94. MRPL19 ENSGALG00000016731 22670 0.929 - - - - - - 0.929 - - - mitochondrial ribosomal protein L19, transcript variant X1
95. GPI ENSGALG00000004956 40030 0.929 - - - - 0.929 - - - - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
96. PDDC1 5179 0.923 - - - - - - - 0.923 - - Parkinson disease 7 domain containing 1, transcript variant X6
97. RUNX1T1 ENSGALG00000033091 17529 0.92 - - - - 0.920 - - - - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
98. PTDSS1 ENSGALG00000030185 5515 0.919 - - - - - - 0.919 - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
99. PAX-7 PAX-7 3856 0.919 - - - - 0.919 - - - - -
100. ADH5 ENSGALG00000012245 38217 0.915 - - - - - - 0.915 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]

There are 323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA