Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MCM3

Gene Name Gene ID Reads Annotation
MCM3 ENSGALG00000016676 16934 minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]











Genes with expression patterns similar to MCM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MCM3 ENSGALG00000016676 16934 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
2. USPL1 ENSGALG00000017079 6263 1.702 - - 0.704 - - - 0.998 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
3. C15H12ORF49 C15H12ORF49 13250 1.702 - - - - - - 0.995 - - 0.707
4. MED17 ENSGALG00000017218 5821 1.631 - - - - - - - 0.871 - 0.760 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
5. SF3A1 ENSGALG00000007937 11716 1.614 - - 0.758 - - - - 0.856 - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
6. TXN2 ENSGALG00000012532 12518 1.606 - - 0.803 - - - - 0.803 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
7. MYCL ENSGALG00000024047 10367 1.59 - - - - - - - 0.758 - 0.832 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
8. MYST2 MYST2 8078 1.589 - - - - - - - 0.848 - 0.741
9. SRP68 ENSGALG00000002062 7370 1.572 - - 0.796 - - - - 0.776 - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
10. C6orf211 C6orf211 2644 1.529 - - 0.762 - - - - 0.767 - -
11. TMEM8A ENSGALG00000026188 3092 1.509 - - 0.753 - - - - 0.756 - - transmembrane protein 8A [Source:HGNC Symbol;Acc:HGNC:17205]
12. CEPT1 ENSGALG00000000142 4219 1.507 - - 0.732 - - - - - - 0.775 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
13. AGFG1 ENSGALG00000003052 4766 1.485 - - 0.703 - - - - 0.782 - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
14. STAU1 ENSGALG00000004736 3828 1.473 - - 0.739 - - - - - - 0.734 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
15. PLEKHB2 ENSGALG00000002169 3832 1.472 - - 0.754 - - - - 0.718 - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
16. BZW2 ENSGALG00000010809 29213 1.461 - - 0.757 - - - - 0.704 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
17. ATF7IP ENSGALG00000011814 1571 1.459 - - 0.739 - - - - - - 0.720 activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
18. WDHD1 ENSGALG00000012199 3570 0.999 - - - - - - 0.999 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
19. C9orf64 ENSGALG00000012589 6097 0.999 - - - - - - 0.999 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
20. FAM192A ENSGALG00000021473 10213 0.999 - - - - - - 0.999 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
21. ARHGAP32 ENSGALG00000043511 7916 0.999 - - - - - - 0.999 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
22. EIF1B ENSGALG00000038646 9508 0.999 - - - - - - 0.999 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
23. CORO1C ENSGALG00000004901 7055 0.998 - - - - - - 0.998 - - - coronin 1C [Source:NCBI gene;Acc:416893]
24. DAPK3 ENSGALG00000037733 6215 0.998 - - - - - - 0.998 - - - death-associated protein kinase 3, transcript variant X2
25. LRPAP1 ENSGALG00000015612 3526 0.998 - - - - - - 0.998 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
26. Sep-06 Sep-06 5961 0.998 - - - - - - 0.998 - - -
27. FAT1 ENSGALG00000013579 6030 0.998 - - - - - - 0.998 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
28. VSX1 ENSGALG00000037576 1517 0.998 - - - - - - 0.998 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
29. CCNYL1 ENSGALG00000008485 11958 0.998 - - - - - - 0.998 - - - cyclin Y like 1
30. HDAC8 ENSGALG00000004825 12066 0.998 - - - - - - 0.998 - - - histone deacetylase 8, transcript variant X2
31. MATR3 ENSGALG00000002478 12793 0.997 - - - - - - 0.997 - - - matrin 3 [Source:NCBI gene;Acc:373948]
32. RAB12 ENSGALG00000033608 14160 0.997 - - - - - - 0.997 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
33. RNF141 ENSGALG00000029586 4962 0.997 - - - - - - 0.997 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
34. ZEB1 ENSGALG00000007260 9277 0.997 - - - - - - 0.997 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
35. GPC1 ENSGALG00000040316 13364 0.997 - - - - - - 0.997 - - - glypican 1 [Source:NCBI gene;Acc:424770]
36. CNOT6 ENSGALG00000034316 10496 0.996 - - - - - - 0.996 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
37. EIF3D ENSGALG00000012529 40887 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
38. EFTUD2 ENSGALG00000000988 17913 0.995 - - - - - - 0.995 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
39. MCM6 ENSGALG00000012348 12523 0.995 - - - - - - 0.995 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
40. SLC9A3R1 ENSGALG00000007650 13053 0.994 - - - - - - 0.994 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
41. CTBPL ENSGALG00000007642 14238 0.994 - - - - - - 0.994 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
42. CXCL12 ENSGALG00000041346 4128 0.994 - - - - - - 0.994 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
43. IFT20 ENSGALG00000005707 23973 0.993 - - - - - - 0.993 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
44. DNAJC7 ENSGALG00000042796 14597 0.993 - - - - - - 0.993 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
45. TMEM18 ENSGALG00000028744 11779 0.993 - - - - - - 0.993 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
46. RAP1B ENSGALG00000009927 26562 0.99 - - - - - - 0.990 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
47. UBE2L3 ENSGALG00000036739 21401 0.99 - - - - - - 0.990 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
48. INTS4 ENSGALG00000000091 5965 0.99 - - - - - - 0.990 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
49. DHFR ENSGALG00000026757 18478 0.989 - - - - - - 0.989 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
50. LRPPRC ENSGALG00000009967 17091 0.987 - - - - - - 0.987 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
51. PDLIM4 ENSGALG00000039872 7823 0.985 - - - - - - 0.985 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
52. PPIG ENSGALG00000009839 24114 0.984 - - - - - - 0.984 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
53. HNRNPH3 ENSGALG00000003947 28724 0.983 - - - - - - 0.983 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
54. ZNF644 ENSGALG00000034253 28348 0.983 - - - - - - 0.983 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
55. CDCA4 ENSGALG00000011692 10381 0.983 - - - - - - 0.983 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
56. SMARCE1 ENSGALG00000003882 49063 0.974 - - - - - - 0.974 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
57. HNRNPM ENSGALG00000000377 40684 0.955 - - - - - - 0.955 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
58. FBXO3 ENSGALG00000034029 15089 0.882 - - - - - - - 0.882 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
59. SALL4 ENSGALG00000041365 6760 0.881 - - - - - - - 0.881 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
60. NPR3 ENSGALG00000017405 2500 0.869 - - - - - - - - - 0.869 natriuretic peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:7945]
61. CCDC101 CCDC101 9111 0.861 - - - - - - - - - 0.861
62. SLC35B1 ENSGALG00000035057 10683 0.853 - - - - - - - 0.853 - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
63. FUBP3 ENSGALG00000003941 12667 0.851 - - - - - - - 0.851 - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
64. NDUFS3 ENSGALG00000008084 12471 0.851 - - - - - - - 0.851 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
65. PSMD6 ENSGALG00000007315 3906 0.847 - - - - - - - 0.847 - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
66. SF3A2 ENSGALG00000021679 12580 0.844 - - - - - - - 0.844 - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
67. LRP4 ENSGALG00000032181 1756 0.839 - - - - - - - - - 0.839 LDL receptor related protein 4 [Source:HGNC Symbol;Acc:HGNC:6696]
68. TNFRSF21 ENSGALG00000016719 2762 0.839 - - - - - - - - - 0.839 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
69. ELL ENSGALG00000033513 6536 0.838 - - - - - - - 0.838 - - elongation factor for RNA polymerase II [Source:NCBI gene;Acc:420124]
70. NSF ENSGALG00000001055 7399 0.835 - - - - - - - 0.835 - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
71. CSTF2 ENSGALG00000006760 8820 0.834 - - - - - - - - - 0.834 cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
72. FTSJ3 ENSGALG00000032993 8929 0.834 - - - - - - - - - 0.834 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
73. RGP1 ENSGALG00000002394 5937 0.833 - - - - - - - - - 0.833 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
74. BTAF1 ENSGALG00000030598 3556 0.831 - - - - - - - 0.831 - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
75. TRIP4 ENSGALG00000030672 1255 0.831 - - - - - - - - - 0.831 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
76. PRR11 2624 0.83 - - - - - - - - - 0.830 proline rich 11, transcript variant X8
77. NET1 ENSGALG00000008437 9850 0.829 - - - - - - - - - 0.829 neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
78. MBD4 ENSGALG00000020747 3644 0.829 - - - - - - - - - 0.829 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
79. SNN ENSGALG00000028876 1687 0.828 - - - - - - - - - 0.828 stannin [Source:NCBI gene;Acc:416429]
80. MITF ENSGALG00000039583 865 0.828 - - - - - - - - - 0.828 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
81. MED4 ENSGALG00000016995 3309 0.828 - - - - - - - 0.828 - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
82. ADIPOR2 ENSGALG00000035533 6523 0.827 - - - - - - - 0.827 - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
83. GRPEL2 ENSGALG00000002673 105 0.827 - - - - - - - - - 0.827 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
84. IGF2BP1 ENSGALG00000041204 6420 0.827 - - 0.827 - - - - - - - insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
85. MRPS5 ENSGALG00000008550 1707 0.826 - - - - - - - - - 0.826 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
86. NR2C1 ENSGALG00000011327 5109 0.826 - - - - - - - 0.826 - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
87. VAV2 ENSGALG00000002699 503 0.826 - - - - - - - - - 0.826 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
88. FNDC3AL ENSGALG00000004169 4980 0.825 - - - - - - - 0.825 - - fibronectin type III domain containing 3A-like, transcript variant X3
89. FBXL17 ENSGALG00000000276 2443 0.824 - - - - - - - - - 0.824 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
90. GNPAT ENSGALG00000011163 4286 0.823 - - - - - - - - - 0.823 glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
91. LUM ENSGALG00000011271 44020 0.822 - - - - - - 0.822 - - - lumican [Source:NCBI gene;Acc:417891]
92. OVCA2 ENSGALG00000045371 2862 0.822 - - 0.822 - - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
93. VPRBP VPRBP 4037 0.821 - - - - - - - - - 0.821
94. UBR2 ENSGALG00000009906 7717 0.82 - - 0.820 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
95. PSMD7 ENSGALG00000000707 26350 0.82 - - - - - - - 0.820 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
96. STX6 3297 0.82 - - - - - - - - - 0.820 syntaxin 6
97. CTK-1 CTK-1 1618 0.818 - - - - - - - - - 0.818
98. VOPP1 ENSGALG00000042773 771 0.817 - - - - - - - - - 0.817 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
99. TRMT44 ENSGALG00000015594 1490 0.817 - - - - - - - - - 0.817 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
100. ZNF142 ENSGALG00000011393 2078 0.816 - - - - - - - - - 0.816 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]

There are 568 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA