Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MCF2

Gene Name Gene ID Reads Annotation
MCF2 ENSGALG00000006562 59 MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]











Genes with expression patterns similar to MCF2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MCF2 ENSGALG00000006562 59 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
2. CD101 12 1.552 - - 0.774 - - - 0.778 - - - CD101 molecule, transcript variant X4
3. EFCAB1 ENSGALG00000009473 41 1 - - - - - - 1.000 - - - EF-hand calcium binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25678]
4. ABCB11 ENSGALG00000010891 24 0.996 - - - - - - - 0.996 - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
5. CHFR ENSGALG00000002180 17 0.979 - - - - - - - 0.979 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
6. SMAD9 ENSGALG00000017050 11 0.979 - - - - - - - 0.979 - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
7. ADRA2C ENSGALG00000015608 42 0.979 - - - - - - - 0.979 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
8. ATP6V1A ENSGALG00000014800 4 0.975 - - - - - - - 0.975 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
9. CCDC39 ENSGALG00000021855 23 0.975 - - - - - - - 0.975 - - coiled-coil domain containing 39
10. MLNR ENSGALG00000017003 10 0.975 - - - - - - - 0.975 - - motilin receptor [Source:NCBI gene;Acc:428072]
11. C9orf152 C9orf152 3 0.975 - - - - - - - 0.975 - -
12. C9ORF9 C9ORF9 13 0.967 - - - - - - - 0.967 - -
13. NMRK2 ENSGALG00000025751 57 0.949 - - - - - - - 0.949 - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
14. TRPA1 ENSGALG00000034751 148 0.948 - - - - - - - 0.948 - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
15. CCDC147 CCDC147 53 0.944 - - - - - - - 0.944 - -
16. CHRM2 ENSGALG00000012894 21 0.944 - - - - - - - 0.944 - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
17. TICRR ENSGALG00000006631 495 0.942 - - - - - - - 0.942 - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
18. RAMP1 ENSGALG00000003821 389 0.939 - - - - - - - 0.939 - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
19. C4orf48 C4orf48 255 0.934 - - - - - - - 0.934 - -
20. CHADL ENSGALG00000011970 42 0.923 - - - - - - - 0.923 - - chondroadherin-like [Source:NCBI gene;Acc:417998]
21. PDPR ENSGALG00000002690 45 0.92 - - - - - - - 0.920 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
22. SGIP1 ENSGALG00000011113 20 0.916 - - - - - - - 0.916 - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
23. CPAMD8 ENSGALG00000003742 151 0.914 - - - - - - - 0.914 - - C3 and PZP like, alpha-2-macroglobulin domain containing 8, transcript variant X3
24. CRAT ENSGALG00000037443 78 0.911 - - - - - - - 0.911 - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
25. TSPAN14 ENSGALG00000002414 69 0.911 - - - - - - - 0.911 - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
26. ASTE1 ENSGALG00000036171 155 0.911 - - - - - - - 0.911 - - asteroid homolog 1 (Drosophila), transcript variant X3
27. LAMP1 ENSGALG00000037697 247 0.911 - - - - - - - 0.911 - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
28. ENSGALG00000019896 ENSGALG00000019896 3 0.902 - - - - - - - 0.902 - -
29. PCNXL4 PCNXL4 58 0.884 - - - - - - - 0.884 - -
30. HPCAL4 ENSGALG00000003829 75 0.884 - - - - - - - 0.884 - - hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
31. ENSGALG00000017013 ENSGALG00000017013 286 0.883 - - - - - - - 0.883 - -
32. ENSGALG00000001629 ENSGALG00000001629 31 0.877 - - - - - - - 0.877 - -
33. KCTD14 ENSGALG00000017266 31 0.876 - - 0.876 - - - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
34. ENSGALG00000009041 ENSGALG00000009041 27 0.874 - - - 0.874 - - - - - -
35. MAPKAPK3 ENSGALG00000002283 30 0.873 - - - - - - - 0.873 - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
36. DAPK1 ENSGALG00000012608 17 0.87 - - - - - - - 0.870 - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
37. WARS ENSGALG00000011228 193 0.856 - - - - - - - 0.856 - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
38. MZB1 ENSGALG00000044427 6 0.856 - - 0.856 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
39. ADPGK ENSGALG00000001788 208 0.851 - - - - - - - 0.851 - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
40. ANKEF1 ENSGALG00000008996 12 0.848 - - - - - - 0.848 - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
41. C15orf39 ENSGALG00000027805 1 0.848 - - - - - - 0.848 - - - chromosome 15 open reading frame 39, transcript variant X2
42. MST MST 9 0.848 - - - - - - 0.848 - - -
43. SLC24A5 ENSGALG00000004885 8 0.848 - - - - - - 0.848 - - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
44. NDST3 22 0.848 - - - - - - 0.848 - - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
45. CLVS2 ENSGALG00000014853 22 0.848 - - - - - - 0.848 - - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
46. WARS2 ENSGALG00000014772 29 0.848 - - - - - - 0.848 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
47. EDRF1 26 0.848 - - - - - - 0.848 - - - erythroid differentiation regulatory factor 1
48. AQP12 AQP12 11 0.848 - - - - - - 0.848 - - -
49. SAMD10 ENSGALG00000006007 15 0.848 - - - - - - 0.848 - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
50. LOC769486 ENSGALG00000029144 20 0.848 - - - - - - 0.848 - - - scale keratin-like, transcript variant X1
51. MYOM3 ENSGALG00000004155 86 0.848 - - - - - - 0.848 - - - myomesin 3 [Source:HGNC Symbol;Acc:HGNC:26679]
52. CHRNG ENSGALG00000007906 19 0.848 - - - - - - 0.848 - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
53. DENND3 ENSGALG00000031380 11 0.848 - - - - - - 0.848 - - - DENN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29134]
54. PARD6B ENSGALG00000007994 15 0.848 - - - - - - 0.848 - - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
55. GTF3C3 ENSGALG00000007958 6 0.848 - - - - - - 0.848 - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
56. NRAP ENSGALG00000008914 24 0.848 - - - - - - 0.848 - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
57. ABI2 ENSGALG00000008714 27 0.848 - - - - - - 0.848 - - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
58. CDC20B ENSGALG00000046188 10 0.848 - - - - - - 0.848 - - - cell division cycle 20B [Source:HGNC Symbol;Acc:HGNC:24222]
59. HS3ST5 ENSGALG00000026594 44 0.848 - - - - - - 0.848 - - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
60. GABRP ENSGALG00000002152 17 0.848 - - - - - - 0.848 - - - gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
61. ENSGALG00000013327 ENSGALG00000013327 16 0.848 - - - - - - 0.848 - - -
62. BICD1 ENSGALG00000012934 112 0.848 - - - - - - 0.848 - - - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
63. STEAP1 ENSGALG00000009006 16 0.847 - - - - - - - 0.847 - - STEAP family member 1
64. ZNF6 ZNF6 138 0.842 - - - - - - 0.842 - - -
65. MASP2 ENSGALG00000003016 35 0.84 - - - - - - - 0.840 - - mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
66. ZNF521 ENSGALG00000015112 8 0.834 - - 0.834 - - - - - - - zinc finger protein 521 [Source:HGNC Symbol;Acc:HGNC:24605]
67. BATF ENSGALG00000010323 96 0.832 - - - - - - - 0.832 - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
68. FSIP1 ENSGALG00000009624 40 0.832 - - 0.832 - - - - - - - fibrous sheath interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:21674]
69. NEU2 ENSGALG00000037467 34 0.83 - - - - - - - 0.830 - - neuraminidase 2 [Source:HGNC Symbol;Acc:HGNC:7759]
70. CA4 ENSGALG00000005360 3 0.828 - - - - - - 0.828 - - - carbonic anhydrase 4 [Source:HGNC Symbol;Acc:HGNC:1375]
71. CASP18 ENSGALG00000008346 23 0.827 - - - - - - - 0.827 - - initiator caspase [Source:NCBI gene;Acc:693266]
72. SDSL ENSGALG00000008317 55 0.827 - - - - - - - 0.827 - - serine dehydratase like [Source:NCBI gene;Acc:417030]
73. GIF ENSGALG00000031546 2 0.82 - - 0.820 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
74. GABRG1 ENSGALG00000020143 5 0.82 - - 0.820 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
75. ENSGALG00000009969 ENSGALG00000009969 2 0.82 - - 0.820 - - - - - - -
76. CSF3R ENSGALG00000002112 2 0.82 - - 0.820 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
77. MYRFL ENSGALG00000019352 2 0.82 - - 0.820 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
78. PDE1A ENSGALG00000008885 4 0.82 - - 0.820 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
79. PABPC1L ENSGALG00000004123 2 0.82 - - 0.820 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
80. RHCG ENSGALG00000006635 7 0.82 - - 0.820 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
81. AGRP ENSGALG00000002244 27 0.82 - - 0.820 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
82. DOK4 ENSGALG00000001160 2 0.82 - - 0.820 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
83. TAPP2 TAPP2 2 0.82 - - 0.820 - - - - - - -
84. VCAM1 ENSGALG00000005257 102 0.82 - - 0.820 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
85. TSPAN15 ENSGALG00000004257 185 0.818 - - - - - - 0.818 - - - tetraspanin 15 [Source:NCBI gene;Acc:423699]
86. RANBP17 47 0.817 - - - - - - - 0.817 - - RAN binding protein 17
87. gga-mir-1652 ENSGALG00000025444 119 0.803 - - 0.803 - - - - - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
88. gga-mir-21 ENSGALG00000021733 42 0.802 - - 0.802 - - - - - - - gga-mir-21 [Source:miRBase;Acc:MI0004994]
89. UNC80 ENSGALG00000041563 15 0.793 - - 0.793 - - - - - - - unc-80 homolog, NALCN activator, transcript variant X3
90. CCDC180 109 0.792 - - - - - - 0.792 - - - coiled-coil domain containing 180
91. CHRNA6 ENSGALG00000015382 31 0.791 - - 0.791 - - - - - - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
92. C1QTNF5 ENSGALG00000006758 241 0.79 - - - - - - - 0.790 - - C1q and TNF related 5 [Source:HGNC Symbol;Acc:HGNC:14344]
93. PCDH12 ENSGALG00000002544 36 0.789 - - 0.789 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
94. EF1A EF1A 2378 0.789 - - - - - - - 0.789 - -
95. ENSGALG00000008689 ENSGALG00000008689 232 0.788 - - - - - - 0.788 - - -
96. ENSGALG00000010883 ENSGALG00000010883 10 0.788 - - - - - - 0.788 - - -
97. LOC421415 ENSGALG00000010024 12 0.788 - - - - - - 0.788 - - - uncharacterized LOC421415, transcript variant X6
98. SLC32A1 ENSGALG00000038919 61 0.787 - - 0.787 - - - - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
99. ENSGALG00000011273 ENSGALG00000011273 9 0.785 - - - - - - - 0.785 - -
100. TTC36 ENSGALG00000006812 63 0.778 - - - - - - - 0.778 - - tetratricopeptide repeat domain 36 [Source:NCBI gene;Acc:419757]

There are 54 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA