Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MCEE

Gene Name Gene ID Reads Annotation
MCEE ENSGALG00000003913 1527 methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]











Genes with expression patterns similar to MCEE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MCEE ENSGALG00000003913 1527 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
2. SGSM3 ENSGALG00000012033 1839 1.686 - - - - - - 0.855 - 0.831 - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
3. MPST ENSGALG00000040840 2122 1.541 - - - - - - 0.831 0.710 - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
4. IL11RA ENSGALG00000005848 1242 1.496 - - - - - - - 0.762 0.734 - interleukin 11 receptor subunit alpha [Source:NCBI gene;Acc:693251]
5. SCAF4 ENSGALG00000033965 2027 0.936 - - - - - - 0.936 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
6. NCAPG2 ENSGALG00000006525 2319 0.928 - - - - - - 0.928 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
7. TUBA4A ENSGALG00000000433 1367 0.907 - - - - - - 0.907 - - - tubulin alpha 4a
8. C14orf80 C14orf80 1921 0.907 - - - - - - 0.907 - - -
9. WDSUB1 ENSGALG00000012574 2038 0.9 - - - - - - 0.900 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
10. ZFYVE19 ENSGALG00000008460 2750 0.899 - - - - - - 0.899 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
11. DNAJC16 ENSGALG00000032832 750 0.898 - - - - - - 0.898 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
12. RAB1A ENSGALG00000031582 6929 0.898 - - - - - - 0.898 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
13. ENSGALG00000013233 ENSGALG00000013233 3265 0.898 - - - - - - 0.898 - - -
14. BPHL ENSGALG00000029659 501 0.897 - - - - - - 0.897 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
15. MESDC1 1013 0.895 - - - - - - 0.895 - - - mesoderm development candidate 1
16. NSRP1 ENSGALG00000004186 1683 0.893 - - - - - - 0.893 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
17. TM2D3 ENSGALG00000026271 2566 0.892 - - - - - - 0.892 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
18. HESX1 ENSGALG00000005506 203 0.892 - - - - - - 0.892 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
19. OCRL ENSGALG00000003920 1812 0.891 - - - - - - 0.891 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
20. PKN3 532 0.89 - - - - - - 0.890 - - - protein kinase N3, transcript variant X2
21. NUP205 ENSGALG00000011662 4157 0.89 - - - - - - 0.890 - - - nucleoporin 205
22. GPN3 ENSGALG00000003807 6320 0.89 - - - - - - 0.890 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
23. GAS6 ENSGALG00000016820 481 0.889 - - - - - - 0.889 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
24. USP8 ENSGALG00000005894 4499 0.889 - - - - - - 0.889 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
25. UPK3BL ENSGALG00000001885 1650 0.888 - - - - - - 0.888 - - - uroplakin 3B-like
26. UBE3B ENSGALG00000013851 1672 0.888 - - - - - - 0.888 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
27. MST1 ENSGALG00000002722 994 0.887 - - - - - - 0.887 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
28. ENTPD8L ENSGALG00000008936 731 0.887 - - - - - - 0.887 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
29. RPIA ENSGALG00000015960 2784 0.886 - - - - - - 0.886 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
30. SQLE ENSGALG00000036915 4172 0.885 - - - - - - 0.885 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
31. CCNE2 ENSGALG00000040794 1229 0.885 - - - - - - 0.885 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
32. TCTE1 ENSGALG00000010165 65 0.885 - - - - - - 0.885 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
33. PIK3R3 ENSGALG00000010335 374 0.884 - - - - - - 0.884 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
34. GGA.8379 GGA.8379 4419 0.884 - - - - - - 0.884 - - -
35. SCUBE1 ENSGALG00000014178 91 0.883 - - - - - - 0.883 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
36. ENSGALG00000003619 ENSGALG00000003619 58 0.883 - - - - - - 0.883 - - -
37. FAM57A ENSGALG00000004820 1492 0.882 - - - - - - 0.882 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
38. SPCS2 ENSGALG00000019036 9496 0.881 - - - - - - 0.881 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
39. SNORA31 SNORA31 183 0.881 - - - - - - 0.881 - - -
40. PTN ENSGALG00000040493 864 0.881 - - - - - - 0.881 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
41. ENSGALG00000026925 ENSGALG00000026925 119 0.88 - - - - - - 0.880 - - -
42. HEMK1 ENSGALG00000002253 40 0.88 - - - - - - 0.880 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
43. METTL24 ENSGALG00000041120 60 0.88 - - - - - - 0.880 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
44. GRB14 ENSGALG00000020703 42 0.879 - - - - - - 0.879 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
45. ECHDC3 ENSGALG00000006690 1299 0.878 - - - - - - 0.878 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
46. SPG11 ENSGALG00000008180 1890 0.878 - - - - - - 0.878 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
47. MXRA5 ENSGALG00000016635 352 0.878 - - - - - - 0.878 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
48. CANX ENSGALG00000032148 11297 0.878 - - - - - - 0.878 - - - calnexin [Source:NCBI gene;Acc:416288]
49. TOP3B ENSGALG00000030051 5953 0.877 - - - - - - 0.877 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
50. ENSGALG00000016099 ENSGALG00000016099 138 0.877 - - - - - - 0.877 - - -
51. NSMCE4A ENSGALG00000009504 1302 0.876 - - - - - - 0.876 - - - NSE4 homolog A, SMC5-SMC6 complex component
52. FAM183A 242 0.875 - - - - - - 0.875 - - - family with sequence similarity 183 member A, transcript variant 2
53. B4GALT3 ENSGALG00000022891 2825 0.874 - - - - - - 0.874 - - - beta-1,4-galactosyltransferase 3
54. COPS8 ENSGALG00000033385 10166 0.873 - - - - - - 0.873 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
55. MORC3 ENSGALG00000036556 2976 0.873 - - - - - - 0.873 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
56. CLDND1 ENSGALG00000039538 5048 0.872 - - - - - - 0.872 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
57. LSM10 ENSGALG00000002127 2519 0.872 - - - - - - 0.872 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
58. PARL ENSGALG00000002315 15943 0.872 - - - - - - 0.872 - - - presenilin associated rhomboid like
59. USP54 ENSGALG00000005232 2749 0.872 - - - - - - 0.872 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
60. ENSGALG00000002852 ENSGALG00000002852 2687 0.87 - - - - - - 0.870 - - -
61. ENSGALG00000028164 ENSGALG00000028164 3325 0.869 - - - - - - 0.869 - - -
62. ATM ENSGALG00000017159 893 0.869 - - - - - - 0.869 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
63. ITSN1 ENSGALG00000036677 5727 0.868 - - - - - - 0.868 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
64. VPS29 ENSGALG00000004529 22509 0.867 - - - - - - 0.867 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
65. MGLL ENSGALG00000032736 612 0.867 - - - - - - 0.867 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
66. FAM193A ENSGALG00000015667 3075 0.866 - - - - - - 0.866 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
67. SRP72 ENSGALG00000011403 13666 0.866 - - - - - - 0.866 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
68. NIN ENSGALG00000012361 2284 0.866 - - - - - - 0.866 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
69. FTSJ2 FTSJ2 2951 0.864 - - - - - - 0.864 - - -
70. TAF8 ENSGALG00000003498 2071 0.863 - - - - - - 0.863 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
71. SUN1 ENSGALG00000003781 3442 0.862 - - - - - - 0.862 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
72. CCNL1 ENSGALG00000009699 1033 0.862 - - - - - - 0.862 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
73. SPAG9 ENSGALG00000034001 2314 0.861 - - - - - - 0.861 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
74. TLCD2 ENSGALG00000021592 1166 0.861 - - - - - - 0.861 - - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
75. TPR ENSGALG00000005105 2924 0.859 - - - - - - 0.859 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
76. PGAP2 ENSGALG00000027762 2583 0.859 - - - - - - 0.859 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
77. ZOV3 ZOV3 3267 0.858 - - - - - - - - 0.858 -
78. APP ENSGALG00000015770 9438 0.858 - - - - - - - 0.858 - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
79. WIPI1 ENSGALG00000004215 3359 0.857 - - - - - - 0.857 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
80. MBNL2 ENSGALG00000016890 3162 0.857 - - - - - - 0.857 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
81. DBNDD2 ENSGALG00000003921 8301 0.857 - - - - - - 0.857 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
82. MBTPS1 ENSGALG00000003293 4843 0.857 - - - - - - 0.857 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
83. TMEM135 2283 0.856 - - - - - - 0.856 - - - transmembrane protein 135, transcript variant X4
84. PDHX ENSGALG00000033753 2799 0.855 - - - - - - 0.855 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
85. SDK2 ENSGALG00000031895 2682 0.855 - - - - - - 0.855 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
86. CCDC101 CCDC101 9111 0.854 - - - - - - 0.854 - - -
87. CEP290 ENSGALG00000011177 1559 0.853 - - - - - - 0.853 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
88. SLC25A21 ENSGALG00000010117 536 0.853 - - - - - - 0.853 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
89. CDC42SE2 ENSGALG00000027258 4725 0.853 - - - - - - 0.853 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
90. TM9SF4 ENSGALG00000006568 567 0.853 - - - - - - 0.853 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
91. JMJD7 ENSGALG00000026846 1320 0.852 - - - - - - 0.852 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
92. MRPL10 ENSGALG00000014387 12386 0.852 - - - - - - 0.852 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
93. ARL2BP ENSGALG00000034102 2700 0.852 - - - - - - 0.852 - - - ADP ribosylation factor like GTPase 2 binding protein [Source:NCBI gene;Acc:426495]
94. MSL3 ENSGALG00000041433 2957 0.851 - - - - - - 0.851 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
95. ERMP1 ENSGALG00000000438 1136 0.85 - - - - - - 0.850 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
96. WDR47 ENSGALG00000002129 2624 0.85 - - - - - - 0.850 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
97. RNF20 ENSGALG00000015548 7199 0.85 - - - - - - 0.850 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
98. INTS6 ENSGALG00000017018 3083 0.85 - - - - - - 0.850 - - - integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]
99. SUGP1 ENSGALG00000042132 2771 0.85 - - - - - - 0.850 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
100. PLEKHA3 ENSGALG00000009135 1700 0.849 - - - - - - 0.849 - - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]

There are 228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA