Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MBD4

Gene Name Gene ID Reads Annotation
MBD4 ENSGALG00000020747 3644 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]











Genes with expression patterns similar to MBD4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MBD4 ENSGALG00000020747 3644 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
2. CEP70 ENSGALG00000012087 7992 1.526 - - - - - - - 0.727 - 0.799 centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
3. FTSJ3 ENSGALG00000032993 8929 0.957 - - - - - - - - - 0.957 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
4. RGP1 ENSGALG00000002394 5937 0.956 - - - - - - - - - 0.956 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
5. VAV2 ENSGALG00000002699 503 0.955 - - - - - - - - - 0.955 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
6. TTI1 ENSGALG00000006791 1218 0.954 - - - - - - - - - 0.954 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
7. ZFPM2 ENSGALG00000040079 942 0.952 - - - - - - - - - 0.952 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
8. ZNF142 ENSGALG00000011393 2078 0.952 - - - - - - - - - 0.952 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
9. PTPRE ENSGALG00000009823 250 0.951 - - - - - - - - - 0.951 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
10. STAT5 STAT5 1796 0.951 - - - - - - - - - 0.951
11. TNFRSF21 ENSGALG00000016719 2762 0.951 - - - - - - - - - 0.951 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
12. ADAMTS12 55 0.949 - - - - - - - - - 0.949 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
13. STX6 3297 0.949 - - - - - - - - - 0.949 syntaxin 6
14. NFKBIE ENSGALG00000044525 633 0.947 - - - - - - - - - 0.947 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
15. ENSGALG00000018358 ENSGALG00000018358 101 0.946 - - - - - - - - - 0.946
16. MAP3K8 ENSGALG00000007356 188 0.946 - - - - - - - - - 0.946 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
17. MAP3K3 ENSGALG00000000525 115 0.946 - - - - - - - - - 0.946 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
18. HPS4 ENSGALG00000005595 2217 0.945 - - - - - - - - - 0.945 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
19. ENSGALG00000008594 ENSGALG00000008594 54 0.945 - - - - - - - - - 0.945
20. CNKSR3 ENSGALG00000027159 41 0.944 - - - - - - - - - 0.944 CNKSR family member 3, transcript variant X2
21. BCOR ENSGALG00000016245 85 0.944 - - - - - - - - - 0.944 BCL6 corepressor, transcript variant X8
22. SUPV3L1 ENSGALG00000004197 4141 0.944 - - - - - - - - - 0.944 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
23. UBE3C ENSGALG00000006461 57 0.943 - - - - - - - - - 0.943 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
24. SOS2 ENSGALG00000012273 41 0.943 - - - - - - - - - 0.943 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
25. TM6SF2 ENSGALG00000029015 109 0.943 - - - - - - - - - 0.943 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
26. AGMO ENSGALG00000010792 76 0.942 - - - - - - - - - 0.942 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
27. FN3K ENSGALG00000001531 208 0.942 - - - - - - - - - 0.942 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
28. TRIP4 ENSGALG00000030672 1255 0.942 - - - - - - - - - 0.942 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
29. RPRD2 ENSGALG00000014656 939 0.942 - - - - - - - - - 0.942 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
30. PMVK ENSGALG00000046656 645 0.942 - - - - - - - - - 0.942 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
31. DTX2 ENSGALG00000001905 1475 0.941 - - - - - - - - - 0.941 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
32. ENSGALG00000004772 ENSGALG00000004772 173 0.941 - - - - - - - - - 0.941
33. IMPA2 ENSGALG00000013814 4202 0.941 - - - - - - - - - 0.941 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
34. PROCR ENSGALG00000006547 645 0.94 - - - - - - - - - 0.940 protein C receptor [Source:NCBI gene;Acc:424867]
35. SHPK ENSGALG00000004637 2386 0.939 - - - - - - - - - 0.939 sedoheptulokinase, transcript variant X1
36. ATP2B2 ENSGALG00000030908 584 0.939 - - - - - - - - - 0.939 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
37. ELL2 ENSGALG00000014678 1111 0.938 - - - - - - - - - 0.938 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
38. MITF ENSGALG00000039583 865 0.938 - - - - - - - - - 0.938 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
39. RFWD3 2315 0.938 - - - - - - - - - 0.938 ring finger and WD repeat domain 3
40. FOXP1 127 0.938 - - - - - - - - - 0.938 forkhead box P1, transcript variant X14
41. EEA1 ENSGALG00000011280 923 0.937 - - - - - - - - - 0.937 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
42. PCMTD2 ENSGALG00000005901 1833 0.937 - - - - - - - - - 0.937 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
43. DUSP23 1663 0.937 - - - - - - - - - 0.937 dual specificity phosphatase 23, transcript variant X1
44. SERPINB6 ENSGALG00000012866 1582 0.937 - - - - - - - - - 0.937 serpin family B member 6 [Source:NCBI gene;Acc:420895]
45. RP9 ENSGALG00000035453 1186 0.937 - - - - - - - - - 0.937 retinitis pigmentosa 9 (autosomal dominant)
46. MLST8 ENSGALG00000005878 8116 0.937 - - - - - - - - - 0.937 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
47. USP36 ENSGALG00000037018 783 0.937 - - - - - - - - - 0.937 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
48. ENSGALG00000004643 ENSGALG00000004643 2297 0.937 - - - - - - - - - 0.937
49. TFG ENSGALG00000015299 849 0.936 - - - - - - - - - 0.936 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
50. GRPEL2 ENSGALG00000002673 105 0.936 - - - - - - - - - 0.936 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
51. SLC38A1 ENSGALG00000009698 566 0.936 - - - - - - - - - 0.936 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
52. LUZP1 ENSGALG00000025858 947 0.935 - - - - - - - - - 0.935 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
53. CENPJ ENSGALG00000017148 1415 0.934 - - - - - - - - - 0.934 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
54. GPR114 GPR114 46 0.934 - - - - - - - - - 0.934
55. PRR11 2624 0.934 - - - - - - - - - 0.934 proline rich 11, transcript variant X8
56. TYSND1 ENSGALG00000033807 716 0.934 - - - - - - - - - 0.934 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
57. TMEM199 ENSGALG00000023757 10781 0.933 - - - - - - - - - 0.933 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
58. ENSGALG00000027621 ENSGALG00000027621 863 0.932 - - - - - - - - - 0.932
59. IFNAR2 ENSGALG00000041867 1596 0.93 - - - - - - - - - 0.930 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
60. ARHGAP19 ENSGALG00000007609 3655 0.93 - - - - - - - - - 0.930 Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
61. CTK-1 CTK-1 1618 0.928 - - - - - - - - - 0.928
62. TRIM3 ENSGALG00000034004 110 0.927 - - - - - - - - - 0.927 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
63. PKDCCB ENSGALG00000011166 74 0.927 - - - - - - - - - 0.927 protein kinase domain containing, cytoplasmic b
64. OBFC1 OBFC1 1071 0.926 - - - - - - - - - 0.926
65. C5orf24 ENSGALG00000006371 1573 0.926 - - - - - - - - - 0.926 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
66. CEP57 ENSGALG00000017201 524 0.926 - - - - - - - - - 0.926 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
67. PRICKLE1 ENSGALG00000009556 60 0.925 - - - - - - - - - 0.925 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
68. TRMT44 ENSGALG00000015594 1490 0.924 - - - - - - - - - 0.924 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
69. ENSGALG00000001919 ENSGALG00000001919 531 0.924 - - - - - - - - - 0.924
70. SRA1 ENSGALG00000040453 266 0.924 - - - - - - - - - 0.924 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
71. EP3 EP3 741 0.923 - - - - - - - - - 0.923
72. MYCL ENSGALG00000024047 10367 0.922 - - - - - - - - - 0.922 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
73. BZFP1 ENSGALG00000027546 632 0.922 - - - - - - - - - 0.922 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
74. CCBL2 CCBL2 184 0.921 - - - - - - - - - 0.921
75. FAM96B 14435 0.92 - - - - - - - - - 0.920 family with sequence similarity 96 member B
76. AP3B2 2331 0.919 - - - - - - - - - 0.919 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
77. PDCD7 ENSGALG00000021027 3807 0.918 - - - - - - - - - 0.918 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
78. ANKRA2 ENSGALG00000013511 3460 0.918 - - - - - - - - - 0.918 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
79. TRIM24 ENSGALG00000012823 2725 0.918 - - - - - - - - - 0.918 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
80. CAPN15 ENSGALG00000002018 3353 0.917 - - - - - - - - - 0.917 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
81. CKI CKI 2845 0.916 - - - - - - - - - 0.916
82. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.916 - - - - - - - - - 0.916 family with sequence similarity 83, member D
83. CTCF 10811 0.916 - - - - - - - - - 0.916 CCCTC-binding factor, transcript variant X2
84. DAZAP1 ENSGALG00000015200 1731 0.915 - - - - - - - - - 0.915 DAZ associated protein 1 [Source:NCBI gene;Acc:427266]
85. NHLRC2 ENSGALG00000008946 387 0.914 - - - - - - - - - 0.914 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
86. TGFB3 ENSGALG00000010346 3118 0.914 - - - - - - - - - 0.914 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
87. MASP1 ENSGALG00000007419 141 0.913 - - - - - - - - - 0.913 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
88. RNF220 ENSGALG00000010109 3114 0.913 - - - - - - - - - 0.913 ring finger protein 220 [Source:NCBI gene;Acc:424580]
89. FBXL2 ENSGALG00000030175 157 0.913 - - - - - - - - - 0.913 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]
90. F F 3639 0.912 - - - - - - - - - 0.912
91. VOPP1 ENSGALG00000042773 771 0.91 - - - - - - - - - 0.910 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
92. AMDHD2 ENSGALG00000009234 1730 0.91 - - - - - - - - - 0.910 Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
93. NBN ENSGALG00000037686 648 0.91 - - - - - - - - - 0.910 nibrin [Source:NCBI gene;Acc:374246]
94. PIGW ENSGALG00000023554 951 0.91 - - - - - - - - - 0.910 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
95. PLXNA4 ENSGALG00000006473 125 0.909 - - - - - - - - - 0.909 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
96. PDCD4 ENSGALG00000008700 574 0.909 - - - - - - - - - 0.909 programmed cell death 4 [Source:NCBI gene;Acc:374191]
97. TWF2 ENSGALG00000003977 6597 0.906 - - - - - - - - - 0.906 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
98. PERP PERP 734 0.906 - - - - - - - - - 0.906
99. TSPAN12 ENSGALG00000009029 2145 0.906 - - - - - - - - - 0.906 tetraspanin 12 [Source:NCBI gene;Acc:417763]
100. RASSF8 ENSGALG00000014041 850 0.905 - - - - - - - - - 0.905 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]

There are 359 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA