Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MBD1

Gene Name Gene ID Reads Annotation
MBD1 MBD1 557










Genes with expression patterns similar to MBD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MBD1 MBD1 557 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. havcr1 ENSDARG00000040178 73 1.514 - - - - - 0.747 0.767 - - hepatitis A virus cellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-131]
3. cdr2l ENSDARG00000026834 254 1.512 0.720 - - - - - 0.792 - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
4. TMEM17 ENSDARG00000116334 218 1.509 - - - - - - 0.722 0.787 - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
5. REXO4 ENSDARG00000088619 655 1.499 - 0.794 - - - - 0.705 - - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
6. pfkfb2a ENSDARG00000023840 184 1.495 - - - - - - 0.755 0.740 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
7. zyg11 ENSDARG00000007737 511 1.457 - 0.708 - 0.749 - - - - - zyg-11 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041014-17]
8. spg7 ENSDARG00000068187 451 0.899 - 0.899 - - - - - - - spastic paraplegia 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5391]
9. CU633988.1 CU633988.1 97 0.896 - - - - - - 0.896 - -
10. sacs ENSDARG00000091042 314 0.894 - - - - - - 0.894 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
11. kdm6al ENSDARG00000059794 545 0.871 - - - - - - 0.871 - - lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]
12. TMEM128 552 0.867 - - - - - - 0.867 - - transmembrane protein 128
13. dlec1 ENSDARG00000075825 60 0.857 - - - - - - 0.857 - - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
14. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.848 - - - - - - 0.848 - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
15. CALN1 ENSDARG00000088898 114 0.847 - - - - - - 0.847 - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
16. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 0.845 - - - - - - 0.845 - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
17. syt9b ENSDARG00000029239 31 0.844 - - - - - - 0.844 - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
18. sdccag3 239 0.838 - - - - - - 0.838 - - serologically defined colon cancer antigen 3, transcript variant X2
19. ZAN ZAN 11 0.837 - - - - - - 0.837 - -
20. apoa1bp 529 0.837 - - - - - - 0.837 - - apolipoprotein A-I binding protein
21. DENND1A ENSDARG00000014592 436 0.835 - - - 0.835 - - - - - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
22. CABZ01069006.1 CABZ01069006.1 363 0.833 - - - - - - 0.833 - -
23. lef1 ENSDARG00000031894 492 0.83 - - - - - - 0.830 - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
24. cxcr3.2 ENSDARG00000041041, ENSDARG00000113356 36 0.83 - - - - - - 0.830 - - chemokine (C-X-C motif) receptor 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041114-186]
25. SRR SRR 544 0.829 - - - - - - 0.829 - -
26. zgc:162913 zgc:162913 155 0.827 - - - - - - 0.827 - -
27. spns3 ENSDARG00000035459, ENSDARG00000115176 42 0.827 - - - - - - 0.827 - - spinster homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060531-7]
28. si:dkey-202p8.1 si:dkey-202p8.1 598 0.826 - - - - - - 0.826 - -
29. ccdc53 982 0.826 - - - - - 0.826 - - - coiled-coil domain containing 53
30. npdc1 npdc1 221 0.825 - - - - - - 0.825 - -
31. slc6a13 369 0.822 - - - - - - 0.822 - - solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
32. fam169ab ENSDARG00000004177 232 0.822 - 0.822 - - - - - - - family with sequence similarity 169, member Ab [Source:ZFIN;Acc:ZDB-GENE-091118-95]
33. znf653 ENSDARG00000093469 149 0.822 - - - - - - 0.822 - - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
34. zgc:64106 ENSDARG00000011371 673 0.821 - - - - - - 0.821 - - zgc:64106 [Source:ZFIN;Acc:ZDB-GENE-040426-1370]
35. ap4m1 ENSDARG00000056871 160 0.82 - - - - - - 0.820 - - adaptor related protein complex 4 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-040718-421]
36. phldb1a ENSDARG00000061093 1637 0.818 0.818 - - - - - - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
37. ptprc ENSDARG00000071437 104 0.818 - - - - - - 0.818 - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
38. ZNF784_4 ZNF784_4 113 0.818 - - - - - - 0.818 - -
39. BX323050.1 BX323050.1 116 0.817 - - - - - - 0.817 - -
40. ZNF337_20 ZNF337_20 65 0.817 - - - - - - 0.817 - -
41. C25H11orf74 C25H11orf74 161 0.817 - - - - - - 0.817 - -
42. tubgcp2 ENSDARG00000013079 1520 0.816 - - - - - - 0.816 - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
43. tor1 ENSDARG00000077950 1027 0.815 - - - - - - 0.815 - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
44. CABZ01041682.1 CABZ01041682.1 3 0.814 - - - - - - 0.814 - -
45. BX548078.2 BX548078.2 6 0.814 - - - - - - 0.814 - -
46. trpa1b ENSDARG00000031875 39 0.814 - - - - - - 0.814 - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
47. PKD1 PKD1 260 0.814 - - - - - - 0.814 - -
48. TBC1D17 ENSDARG00000005927 163 0.814 - - - - - - 0.814 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
49. aplnra_1 ENSDARG00000002172 82 0.814 - - - - - - 0.814 - - apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
50. ZC3H4 ENSDARG00000078355 1888 0.813 - 0.813 - - - - - - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
51. C1H20orf27 C1H20orf27 69 0.813 - - - - - - 0.813 - -
52. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.812 - - - - - - 0.812 - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
53. ube3c ENSDARG00000035978, ENSDARG00000112229 787 0.812 - - - - - - 0.812 - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
54. mrps5 ENSDARG00000062209, ENSDARG00000114003 619 0.812 - - 0.812 - - - - - - mitochondrial ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-060929-264]
55. ddb2 ENSDARG00000041140, ENSDARG00000114723 827 0.811 - 0.811 - - - - - - - damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]
56. il4r il4r 75 0.81 - - - - - - 0.810 - -
57. RNF219 ENSDARG00000090904 176 0.809 - - - - - - 0.809 - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
58. si:dkey-245p14.4 ENSDARG00000070320 418 0.808 - - - - - - 0.808 - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
59. tead1a ENSDARG00000028159 3574 0.806 - 0.806 - - - - - - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
60. SNORA5 SNORA5 72 0.805 - - - - - - 0.805 - -
61. tbrg4 ENSDARG00000074807 674 0.805 - 0.805 - - - - - - - transforming growth factor beta regulator 4 [Source:ZFIN;Acc:ZDB-GENE-091020-8]
62. zgc:113030 ENSDARG00000069869 53 0.803 - - - - - - 0.803 - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
63. si:ch211-255g12.7 si:ch211-255g12.7 44 0.802 - - - - - - 0.802 - -
64. dyrk1ab ENSDARG00000023814 1769 0.802 - - - - - - - 0.802 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
65. si:ch211-270n8.4 87 0.802 - - - - 0.802 - - - - si:ch211-270n8.4
66. CCDC134_1 CCDC134_1 200 0.801 - - - 0.801 - - - - -
67. yeats4 ENSDARG00000045874 1168 0.8 - - - - - 0.800 - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
68. STARD5 ENSDARG00000076117 251 0.8 - - - - - - 0.800 - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
69. vdac1 ENSDARG00000045132 8051 0.799 0.799 - - - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
70. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 0.798 - - - - - - 0.798 - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
71. ocrl ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 90 0.798 - - - - - - 0.798 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
72. TOP1 ENSDARG00000086775 48 0.798 - - - - - - 0.798 - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
73. TDRD7B ENSDARG00000077523 124 0.798 - - - - - - 0.798 - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
74. LTN1 ENSDARG00000003984 1076 0.797 - - - - - - 0.797 - - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
75. BX470131.2 BX470131.2 135 0.795 - - - - - - 0.795 - -
76. card9 ENSDARG00000067672 33 0.794 - - - - - - 0.794 - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
77. mmp24 ENSDARG00000018896 178 0.794 - - - - - - 0.794 - - matrix metallopeptidase 24 [Source:ZFIN;Acc:ZDB-GENE-040724-262]
78. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 0.793 - 0.793 - - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
79. si:ch211-173p18.3 ENSDARG00000035821 1917 0.792 - - - - - - 0.792 - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
80. COLGALT2 ENSDARG00000014670 63 0.792 - - - - 0.792 - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
81. pcsk5a ENSDARG00000067537 44 0.792 - - - - - - 0.792 - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
82. olah ENSDARG00000058502 100 0.79 - - - - - - 0.790 - - oleoyl-ACP hydrolase [Source:ZFIN;Acc:ZDB-GENE-060312-17]
83. KDM4A KDM4A 372 0.789 - 0.789 - - - - - - -
84. mibp ENSDARG00000101362 37 0.788 - - - - - - 0.788 - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
85. slc24a4b ENSDARG00000067509 33 0.788 - - - - - - 0.788 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
86. CR383676.3_1 CR383676.3_1 177 0.788 - - - - - - - 0.788 -
87. epb41l4a ENSDARG00000040087 1013 0.787 - - - - - 0.787 - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
88. gnb1b ENSDARG00000104372 1077 0.787 0.787 - - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
89. tmtc2 tmtc2 798 0.787 - - - - - - - 0.787 -
90. dnajc4 ENSDARG00000024090, ENSDARG00000114838 403 0.786 - - - - - - - 0.786 - DnaJ (Hsp40) homolog, subfamily C, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3093]
91. cnppd1 ENSDARG00000027078 3778 0.786 0.786 - - - - - - - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
92. CABZ01097761.1 ENSDARG00000116119 445 0.786 - 0.786 - - - - - - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
93. pknox1.1_1 ENSDARG00000018765 203 0.785 - - - - - - 0.785 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
94. CABZ01058863.1 CABZ01058863.1 28 0.785 - - - - - - 0.785 - -
95. lrrc3ca ENSDARG00000079371 180 0.784 - - - - - - 0.784 - - leucine rich repeat containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080327-9]
96. gpr56 gpr56 523 0.783 - - - - - - - 0.783 -
97. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.782 - - - - - - - 0.782 - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
98. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 0.782 - 0.782 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
99. CU695232.1 ENSDARG00000098286 1266 0.782 - - - - - - 0.782 - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
100. cnpy2 ENSDARG00000007207 241 0.781 - - - - - - 0.781 - - canopy FGF signaling regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060315-4]

There are 596 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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