Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MATR3

Gene Name Gene ID Reads Annotation
MATR3 MATR3 3962










Genes with expression patterns similar to MATR3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MATR3 MATR3 3962 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 2.514 - - - - 0.949 - 0.807 0.758 - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
3. col4a6 ENSDARG00000052061 8636 2.494 - 0.789 - - 0.885 - 0.820 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
4. LEPROTL1 ENSDARG00000104871 3019 2.485 - - - - 0.934 - 0.827 - 0.724 leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
5. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 2.388 - 0.743 - - - - 0.776 - 0.869 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
6. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 2.372 - - - - - 0.800 0.783 - 0.789 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
7. stmn1a ENSDARG00000004169 21169 2.347 - 0.703 - - 0.864 - 0.780 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
8. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 2.244 - - - 0.739 0.718 - 0.787 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
9. efna5a ENSDARG00000089790 1007 2.223 - 0.746 - - - - 0.701 - 0.776 ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
10. btg2 ENSDARG00000020298 6616 1.772 - 0.827 - - 0.945 - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
11. boc ENSDARG00000074335 4832 1.758 - - - - 0.942 - 0.816 - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
12. ap1b1 ENSDARG00000020621 3874 1.755 - - - - 0.939 0.816 - - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
13. CWC15 ENSDARG00000013382 8969 1.754 - 0.838 - - 0.916 - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
14. dido1 ENSDARG00000057940 3819 1.746 - - - - 0.965 - - - 0.781 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
15. gli2b ENSDARG00000020884 1468 1.745 - - - - 0.950 - - 0.795 - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
16. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.735 - - - - 0.947 - - - 0.788 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
17. ppp2r2d ENSDARG00000102009 5710 1.728 - - - - 0.936 - 0.792 - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
18. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.727 - - - - 0.950 - - 0.777 - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
19. supt16h ENSDARG00000079949 4755 1.722 - - - - 0.950 - - - 0.772 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
20. snx12 ENSDARG00000019060 9563 1.72 - - - - 0.917 - 0.803 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
21. bag1 ENSDARG00000020895 1660 1.704 - 0.763 - - 0.941 - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
22. rtn3_1 ENSDARG00000091348 3290 1.704 - - - - 0.950 - 0.754 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
23. bckdk ENSDARG00000016904 3775 1.701 - - - - 0.930 - 0.771 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
24. irx5a ENSDARG00000034043 1694 1.694 - - - - 0.959 - - - 0.735 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
25. snrnp70 ENSDARG00000077126 5921 1.688 - - - - 0.950 - - - 0.738 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
26. ypel3 ENSDARG00000055510 1344 1.684 - - - - 0.948 - - 0.736 - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
27. nfu1 ENSDARG00000068125 1743 1.68 - 0.736 - - 0.944 - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
28. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.675 - - - - 0.945 - 0.730 - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
29. kansl3 ENSDARG00000029556 2487 1.67 - - - - 0.936 0.734 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
30. tefa ENSDARG00000039117, ENSDARG00000109532 3065 1.667 - 0.723 - - 0.944 - - - - thyrotrophic embryonic factor a [Source:ZFIN;Acc:ZDB-GENE-990415-264]
31. ctnnbip1 ENSDARG00000038954 2519 1.66 - - - - 0.944 - - - 0.716 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
32. nkain1 ENSDARG00000006859 1961 1.657 - - - 0.704 0.953 - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
33. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.656 0.709 - - - 0.947 - - - - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
34. abl1 ENSDARG00000035187 3553 1.654 - - - - 0.941 - - - 0.713 c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
35. CPEB2 ENSDARG00000052604 2646 1.653 - - - - 0.941 - 0.712 - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
36. CR387996.1 ENSDARG00000097774 3037 1.652 - - - - 0.949 0.703 - - -
37. zgc:55512 zgc:55512 4436 1.651 - - - - 0.938 - 0.713 - -
38. mrpl43 ENSDARG00000076334 4045 1.644 - 0.838 - - 0.806 - - - - mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]
39. srsf6b ENSDARG00000016783 9926 1.642 - - - - - - 0.812 - 0.830 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
40. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.639 - - - - 0.761 - - 0.878 - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
41. SH3BGRL ENSDARG00000058302 4525 1.632 - - - - 0.924 - - - 0.708 SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
42. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 1.617 - - - - - - 0.818 0.799 - ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
43. u2af2b ENSDARG00000011740 6946 1.617 - - - - - - 0.776 - 0.841 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
44. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 1.608 - - - - 0.811 - 0.797 - - RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
45. msi1 ENSDARG00000010710 2634 1.607 - - - 0.818 - - - - 0.789 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
46. sarnp ENSDARG00000059357 4768 1.586 - - - - - - 0.797 - 0.789 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
47. arhgap5 ENSDARG00000061294 2228 1.586 - - - - - 0.864 0.722 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
48. smc1al ENSDARG00000058203 8838 1.58 - - - - 0.877 - 0.703 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
49. derl1 ENSDARG00000021905 4698 1.58 - - - - - - 0.795 - 0.785 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
50. psen1 ENSDARG00000004870 1590 1.579 - - - - - - 0.784 - 0.795 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
51. nfkbiab ENSDARG00000007693 1345 1.579 - 0.772 - - - - - - 0.807 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
52. psmc3 ENSDARG00000007141 5592 1.577 - 0.760 - - - - - - 0.817 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
53. CU571336.2 CU571336.2 2690 1.577 - 0.863 - - - - 0.714 - -
54. cdca8 ENSDARG00000043137 7541 1.575 - - - - - 0.759 0.816 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
55. pbx4 ENSDARG00000052150 35676 1.574 - 0.814 - - - - 0.760 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
56. tmem167a ENSDARG00000035914 3319 1.572 - 0.750 - - - - 0.822 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
57. abi2b ENSDARG00000014875 2259 1.571 - - - - - - 0.778 - 0.793 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
58. mllt4 mllt4 2939 1.569 - - - - - 0.810 0.759 - -
59. ptpn9a ENSDARG00000077495 2295 1.565 - - - - - - 0.782 0.783 - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
60. hexim1 ENSDARG00000036482 4317 1.565 - 0.748 - - - - 0.817 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
61. syncripl ENSDARG00000026723 3889 1.564 - 0.736 - - - - - - 0.828 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
62. ZFHX2 2463 1.564 - - - - - 0.843 0.721 - - zinc finger homeobox 2, transcript variant X2
63. gnb4b ENSDARG00000115383 7457 1.564 - - - - 0.831 - 0.733 - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
64. tax1bp1b ENSDARG00000056856 4526 1.561 - - - - - 0.778 0.783 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
65. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.56 - - 0.753 - - - 0.807 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
66. prkar1aa ENSDARG00000076128 6565 1.559 - 0.736 - - - - 0.823 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
67. akirin2 ENSDARG00000058729 13245 1.558 - - - - - 0.716 0.842 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
68. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 1.558 0.737 0.821 - - - - - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
69. ube2e1 ENSDARG00000116649 10656 1.557 - - - - 0.831 0.726 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
70. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.552 - 0.810 - - - - 0.742 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
71. TCEB3 2429 1.551 - - - - - - 0.815 - 0.736 transcription elongation factor B (SIII), polypeptide 3
72. ift172 ENSDARG00000041870 1239 1.549 - - - - - - 0.751 0.798 - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
73. MAP4K4 ENSDARG00000098670 4665 1.548 - - - - - 0.777 - 0.771 - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
74. araf ENSDARG00000054533 1132 1.548 - - - - - - 0.775 - 0.773 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
75. map7d1b ENSDARG00000104701 1655 1.548 - 0.792 - - - - - 0.756 - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
76. zgc:56493 ENSDARG00000031435 33407 1.547 - - - - - - 0.812 - 0.735 zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
77. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.545 - 0.764 - - - - 0.781 - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
78. plscr3b ENSDARG00000069432 8500 1.542 - - - - 0.790 - 0.752 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
79. wdr26b ENSDARG00000006812 2216 1.542 - - - - - - 0.771 - 0.771 WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
80. kifc1 ENSDARG00000001558 6658 1.54 - - - - - - 0.729 - 0.811 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
81. otub1b ENSDARG00000011462 4329 1.539 - - - - - - 0.755 - 0.784 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
82. tra2a ENSDARG00000007863 4449 1.539 - - - - - 0.709 - - 0.830 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
83. fam102bb ENSDARG00000002333 1483 1.536 - - - - - - 0.758 - 0.778 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
84. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.536 - - - - - 0.795 0.741 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
85. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.533 - - - 0.730 - - - - 0.803 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
86. CU571336.1 ENSDARG00000099892 2164 1.529 - 0.748 - - - - - - 0.781
87. dohh ENSDARG00000003564, ENSDARG00000116423 1117 1.528 - 0.793 - - - - - - 0.735 deoxyhypusine hydroxylase/monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-451]
88. kansl1a ENSDARG00000090895 2593 1.528 - 0.792 - - - - 0.736 - - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
89. palm1b ENSDARG00000007818 2128 1.528 - - - - - - 0.748 - 0.780 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
90. prpf4bb ENSDARG00000040310 2260 1.528 - 0.733 - - - - - - 0.795 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
91. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.525 - - - 0.773 - - 0.752 - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
92. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.525 - 0.741 - - - - - 0.784 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
93. TNRC6A ENSDARG00000079688 14433 1.524 - - - - - 0.742 0.782 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
94. ubc ENSDARG00000102632 36050 1.523 - - - 0.778 0.745 - - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
95. morc2 ENSDARG00000028539 3259 1.523 0.717 - - - - - - - 0.806 MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
96. HNRNPAB HNRNPAB 22267 1.523 - - - - 0.742 - 0.781 - -
97. CARKD 1398 1.522 - 0.757 - - - - 0.765 - - carbohydrate kinase domain containing, transcript variant X7
98. metrnl 1042 1.519 - - - - - - 0.737 - 0.782 meteorin, glial cell differentiation regulator-like
99. TNPO2 ENSDARG00000042887 2290 1.518 - - - - - 0.716 - - 0.802 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
100. kif15 ENSDARG00000012073 1936 1.517 - - - - - - 0.715 - 0.802 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]

There are 1660 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA