Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MARK3

Gene Name Gene ID Reads Annotation
MARK3 ENSGALG00000011505 14846 microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]











Genes with expression patterns similar to MARK3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MARK3 ENSGALG00000011505 14846 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
2. EIF2D ENSGALG00000000856 8348 1.674 - - - - - - 0.827 0.847 - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
3. ZFR ENSGALG00000003235 8466 1.617 - - - - 0.808 - 0.809 - - - zinc finger RNA binding protein, transcript variant X3
4. OAT ENSGALG00000031158 10249 1.537 - - - - - - 0.770 0.767 - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
5. MOSPD1 ENSGALG00000006132 8503 1.485 - - - - - - 0.746 0.739 - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
6. MED23 ENSGALG00000040607 5105 1.483 - - - - - - 0.702 0.781 - - mediator complex subunit 23 [Source:HGNC Symbol;Acc:HGNC:2372]
7. SMU1 ENSGALG00000002014 8136 1.479 - - - - - - 0.744 0.735 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
8. ARPP21 ENSGALG00000043240 2403 1.443 - - - - 0.727 - 0.716 - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
9. BMI1 ENSGALG00000041267 6618 0.911 - - - - - - 0.911 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
10. FEN1 ENSGALG00000033781 16551 0.91 - - - - - - 0.910 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
11. PARL ENSGALG00000002315 15943 0.884 - - - - - - 0.884 - - - presenilin associated rhomboid like
12. MAD2L1 ENSGALG00000011967 16125 0.874 - - - - - - 0.874 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
13. LPAR1 ENSGALG00000015729 3874 0.872 - - - - - - 0.872 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
14. C5H15ORF29 C5H15ORF29 3709 0.869 - - - - - - 0.869 - - -
15. SUV39H2 ENSGALG00000013920 4360 0.864 - - - - - - 0.864 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
16. TRAPPC4 ENSGALG00000007707 3568 0.862 - - - - - - 0.862 - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
17. PSAP ENSGALG00000004769 14759 0.861 - - - - - - 0.861 - - - prosaposin [Source:NCBI gene;Acc:395602]
18. CDC42SE2 ENSGALG00000027258 4725 0.86 - - - - - - 0.860 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
19. PPM1D ENSGALG00000035610 6530 0.859 - - - - - - 0.859 - - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
20. RCAN3 ENSGALG00000004282 7778 0.858 - - - - - - 0.858 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
21. HOXA9 ENSGALG00000028983 9298 0.858 - - - - - - - 0.858 - - homeobox A9 [Source:NCBI gene;Acc:396096]
22. ZC3H6 ENSGALG00000008269 10353 0.856 - - - - - - 0.856 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
23. LYAR ENSGALG00000015000 10756 0.855 - - - - - - 0.855 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
24. CLPTM1L ENSGALG00000013187 9733 0.855 - - - - - - - 0.855 - - CLPTM1 like [Source:NCBI gene;Acc:420973]
25. UBE2V2 ENSGALG00000028133 7044 0.855 - - - - - - 0.855 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
26. NDUFAF2 ENSGALG00000027564 7302 0.855 - - - - 0.855 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
27. YME1L1 ENSGALG00000007492 8652 0.853 - - - - - - 0.853 - - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
28. EIF3I ENSGALG00000003337 28832 0.852 - - - - - - 0.852 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
29. UBR4 ENSGALG00000030563 5225 0.851 - - - - - - 0.851 - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
30. NEK4 ENSGALG00000041428 4473 0.85 - - - - - - 0.850 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
31. PARN ENSGALG00000003091 6363 0.849 - - - - - - 0.849 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
32. HISTH1 ENSGALG00000011747 16825 0.848 - - - - - - 0.848 - - - histone H1
33. RPE ENSGALG00000002847 7644 0.848 - - - - - - 0.848 - - - ribulose-5-phosphate-3-epimerase, transcript variant X2
34. ORC4 ENSGALG00000012448 8405 0.846 - - - - - - 0.846 - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
35. IK ENSGALG00000037172 12100 0.844 - - - - - - 0.844 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
36. COPS2 ENSGALG00000000404 8980 0.844 - - - - - - 0.844 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
37. HNRNPLL ENSGALG00000008504 14719 0.844 - - - - - - 0.844 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
38. VPS29 ENSGALG00000004529 22509 0.843 - - - - - - 0.843 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
39. CMSS1 ENSGALG00000015267 2954 0.842 - - - - - - 0.842 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
40. TSPAN6 ENSGALG00000006808 20063 0.841 - - - - - - 0.841 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
41. CDC73 ENSGALG00000002469 4586 0.841 - - - - - - 0.841 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
42. SQLE ENSGALG00000036915 4172 0.84 - - - - - - 0.840 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
43. IFT74 ENSGALG00000001801 1932 0.84 - - - - - - 0.840 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
44. AES ENSGALG00000029503 17676 0.84 - - - - - - 0.840 - - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
45. SYS1 ENSGALG00000003929 4487 0.839 - - - - - - 0.839 - - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
46. MTDH ENSGALG00000034050 9525 0.839 - - - - - - 0.839 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
47. HAUS1 ENSGALG00000040397 6195 0.838 - - - - - - 0.838 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
48. MRPL10 ENSGALG00000014387 12386 0.838 - - - - - - 0.838 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
49. PSMA2 ENSGALG00000039387 23620 0.837 - - - - - - 0.837 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
50. USP14 ENSGALG00000014920 18778 0.835 - - - - - - - 0.835 - - ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
51. FN3KRP ENSGALG00000028979 4160 0.834 - - - - - - 0.834 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
52. DPYSL3 ENSGALG00000007582 7743 0.834 - - - - - - 0.834 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
53. CANX ENSGALG00000032148 11297 0.833 - - - - - - 0.833 - - - calnexin [Source:NCBI gene;Acc:416288]
54. DTYMK ENSGALG00000006305 11736 0.833 - - - - - - 0.833 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
55. SEC13 ENSGALG00000008419 18388 0.833 - - - - - - - 0.833 - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
56. ZCCHC2 ENSGALG00000012889 3163 0.833 - - - - - - 0.833 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
57. PDS5A ENSGALG00000014286 13077 0.832 - - - - - - 0.832 - - - PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
58. GGA.8379 GGA.8379 4419 0.831 - - - - - - 0.831 - - -
59. DNPEP ENSGALG00000011318 10623 0.831 - - - - - - 0.831 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
60. SRP72 ENSGALG00000011403 13666 0.831 - - - - - - 0.831 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
61. SEC22B ENSGALG00000039704 16080 0.83 - - - - - - 0.830 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
62. LONP1 ENSGALG00000040492 7133 0.829 - - - - - - 0.829 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
63. THUMPD3 ENSGALG00000008394 17711 0.828 - - - - - - - 0.828 - - THUMP domain containing 3, transcript variant X2
64. ABHD17A ENSGALG00000041163 5578 0.827 - - - - - - 0.827 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
65. DBI ENSGALG00000012112 6910 0.827 - - - - 0.827 - - - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
66. PAPD7 ENSGALG00000013061 2031 0.826 - - - - - - 0.826 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
67. PLRG1 ENSGALG00000009257 8613 0.825 - - - - - - - 0.825 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
68. CEP170 ENSGALG00000010733 4177 0.825 - - - - - - 0.825 - - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
69. PEX16 ENSGALG00000008421 3684 0.825 - - - - - - 0.825 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
70. SCCPDH ENSGALG00000010641 8624 0.825 - - - - - - - 0.825 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
71. CSTF3 ENSGALG00000011685 4711 0.824 - - - - - - 0.824 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
72. ZYX ENSGALG00000014688 8686 0.823 - - - - - - 0.823 - - - zyxin [Source:NCBI gene;Acc:418300]
73. GBAS 18453 0.821 - - - - - - 0.821 - - - glioblastoma amplified sequence
74. PROS1 ENSGALG00000015409 3685 0.82 - - - - - - 0.820 - - - protein S [Source:HGNC Symbol;Acc:HGNC:9456]
75. RBM19 ENSGALG00000008289 10702 0.82 - - - - - - 0.820 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
76. THYN1 ENSGALG00000001529 9423 0.82 - - - - - - - 0.820 - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
77. PALD1 ENSGALG00000004465 3553 0.82 - - - - - - 0.820 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
78. HTATSF1 ENSGALG00000006410 3526 0.818 - - - - - - 0.818 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
79. PMPCB ENSGALG00000008280 6357 0.817 - - - - - - 0.817 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
80. SCLT1 2397 0.817 - - - - - - 0.817 - - - sodium channel and clathrin linker 1, transcript variant X6
81. SURF6 ENSGALG00000038413 11178 0.817 - - - - - - 0.817 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
82. ADH5 ENSGALG00000012245 38217 0.817 - - - - 0.817 - - - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
83. CKAP2 ENSGALG00000017025 25020 0.817 - - - - 0.817 - - - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
84. FAM207A ENSGALG00000007513 8748 0.816 - - - - - - 0.816 - - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
85. ENSGALG00000014375 ENSGALG00000014375 4741 0.815 - - - - - - 0.815 - - -
86. SRSF6 ENSGALG00000000990 12424 0.815 - - - - - - 0.815 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
87. ENSGALG00000004773 ENSGALG00000004773 10418 0.815 - - - - - - - 0.815 - -
88. RPF1 ENSGALG00000008796 9809 0.814 - - - - 0.814 - - - - - ribosome production factor 1 homolog
89. WLS ENSGALG00000011238 20969 0.813 - - - - - - - 0.813 - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
90. CXXC5 ENSGALG00000000884 16351 0.812 - - - - - - - 0.812 - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
91. ZC3H15 ENSGALG00000041857 19808 0.812 - - - - - - - 0.812 - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
92. CLDND1 ENSGALG00000039538 5048 0.812 - - - - - - 0.812 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
93. TMEM39B ENSGALG00000003287 4125 0.811 - - - - - - 0.811 - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
94. DIEXF ENSGALG00000009887 4782 0.81 - - - - - - 0.810 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
95. SUN1 ENSGALG00000003781 3442 0.81 - - - - - - 0.810 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
96. ARL2BP ENSGALG00000034102 2700 0.81 - - - - - - 0.810 - - - ADP ribosylation factor like GTPase 2 binding protein [Source:NCBI gene;Acc:426495]
97. CCNK ENSGALG00000011138 6416 0.81 - - - - - - 0.810 - - - cyclin K [Source:NCBI gene;Acc:423446]
98. TRIP12 ENSGALG00000002929 11713 0.81 - - - - - - 0.810 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
99. SHROOM2 ENSGALG00000030802 4517 0.808 - - - - - - 0.808 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
100. BIVM ENSGALG00000016861 3987 0.808 - - - - - - 0.808 - - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]

There are 348 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA