Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lsm5

Gene Name Gene ID Reads Annotation
Lsm5 ENSMUSG00000091625 6903 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1913623]







Genes with expression patterns similar to Lsm5

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lsm5 ENSMUSG00000091625 6903 6 1.000 1.000 1.000 1.000 1.000 1.000 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1913623]
2. RP23-45G16.5 RP23-45G16.5 2526 0.999 - 0.999 - - - -
3. Ubald1 ENSMUSG00000039568 7639 0.998 - 0.998 - - - - UBA-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1916255]
4. Dnaja1 ENSMUSG00000028410 15060 0.997 - 0.997 - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:MGI Symbol;Acc:MGI:1270129]
5. Rbbp7 ENSMUSG00000031353 10301 0.997 - 0.997 - - - - retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]
6. Lsm14a ENSMUSG00000066568 12051 0.996 - 0.996 - - - - LSM14A mRNA processing body assembly factor [Source:MGI Symbol;Acc:MGI:1914320]
7. Rprd1a ENSMUSG00000040446 3151 0.995 - 0.995 - - - - regulation of nuclear pre-mRNA domain containing 1A [Source:MGI Symbol;Acc:MGI:2385066]
8. Sall2 ENSMUSG00000049532 3472 0.995 - 0.995 - - - - spalt like transcription factor 2 [Source:MGI Symbol;Acc:MGI:1354373]
9. Tmem234 ENSMUSG00000028797 6517 0.995 - 0.995 - - - - transmembrane protein 234 [Source:MGI Symbol;Acc:MGI:1924049]
10. Megf6 ENSMUSG00000057751 2314 0.995 - 0.995 - - - - multiple EGF-like-domains 6 [Source:MGI Symbol;Acc:MGI:1919351]
11. Fxyd6 ENSMUSG00000066705 4456 0.995 - 0.995 - - - - FXYD domain-containing ion transport regulator 6 [Source:MGI Symbol;Acc:MGI:1890226]
12. Papolg ENSMUSG00000020273 2870 0.995 - 0.995 - - - - poly(A) polymerase gamma [Source:MGI Symbol;Acc:MGI:2442119]
13. Mut ENSMUSG00000023921 3121 0.995 - 0.995 - - - - methylmalonyl-Coenzyme A mutase [Source:MGI Symbol;Acc:MGI:97239]
14. Prim2 ENSMUSG00000026134 5806 0.995 - 0.995 - - - - DNA primase, p58 subunit [Source:MGI Symbol;Acc:MGI:97758]
15. Cul1 ENSMUSG00000029686 8892 0.995 - 0.995 - - - - cullin 1 [Source:MGI Symbol;Acc:MGI:1349658]
16. Dynll2 ENSMUSG00000020483 7870 0.994 - 0.994 - - - - dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347]
17. Eif4a3 ENSMUSG00000025580 5936 0.994 - 0.994 - - - - eukaryotic translation initiation factor 4A3 [Source:MGI Symbol;Acc:MGI:1923731]
18. Zc3h11a ENSMUSG00000102976, ENSMUSG00000116275 8902 0.994 - 0.994 - - - - zinc finger CCCH type containing 11A [Source:MGI Symbol;Acc:MGI:1917829]
19. Gm4950 ENSMUSG00000069379 3717 0.993 - 0.993 - - - - predicted pseudogene 4950 [Source:MGI Symbol;Acc:MGI:3649015]
20. Cd9 ENSMUSG00000030342 3230 0.993 - 0.993 - - - - CD9 antigen [Source:MGI Symbol;Acc:MGI:88348]
21. Mfsd10 ENSMUSG00000001082 4758 0.992 - 0.992 - - - - major facilitator superfamily domain containing 10 [Source:MGI Symbol;Acc:MGI:1915544]
22. Zranb2 ENSMUSG00000028180 14182 0.992 - 0.992 - - - - zinc finger, RAN-binding domain containing 2 [Source:MGI Symbol;Acc:MGI:1858211]
23. Ndufa11 ENSMUSG00000002379 5382 0.992 - 0.992 - - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:MGI Symbol;Acc:MGI:1917125]
24. Pja1 ENSMUSG00000034403 6686 0.99 - 0.990 - - - - praja ring finger ubiquitin ligase 1 [Source:MGI Symbol;Acc:MGI:1101765]
25. Rbms3 ENSMUSG00000039607 9380 0.99 - 0.990 - - - - RNA binding motif, single stranded interacting protein [Source:MGI Symbol;Acc:MGI:2444477]
26. Fzr1 ENSMUSG00000020235 15613 0.989 - 0.989 - - - - fizzy and cell division cycle 20 related 1 [Source:MGI Symbol;Acc:MGI:1926790]
27. Hspa5 ENSMUSG00000026864 21863 0.989 - 0.989 - - - - heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
28. Cks2 ENSMUSG00000062248 15997 0.989 - 0.989 - - - - CDC28 protein kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1913447]
29. Dpysl2 ENSMUSG00000022048 17864 0.989 - 0.989 - - - - dihydropyrimidinase-like 2 [Source:MGI Symbol;Acc:MGI:1349763]
30. Rbx1 ENSMUSG00000022400 12346 0.988 - 0.988 - - - - ring-box 1 [Source:MGI Symbol;Acc:MGI:1891829]
31. Gm26917 ENSMUSG00000097971 11603 0.98 - 0.980 - - - - predicted gene, 26917 [Source:MGI Symbol;Acc:MGI:5504032]
32. Mxra7 ENSMUSG00000020814 2601 0.967 - 0.967 - - - - matrix-remodelling associated 7 [Source:MGI Symbol;Acc:MGI:1914872]
33. Pbrm1 ENSMUSG00000042323 25383 0.967 - 0.967 - - - - polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
34. Gm14586 ENSMUSG00000083621 39408 0.957 - 0.957 - - - - predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
35. Ddx39b ENSMUSG00000019432 31517 0.953 - 0.953 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
36. Hsp90aa1 ENSMUSG00000021270 69545 0.953 - 0.953 - - - - heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
37. Cltc ENSMUSG00000047126 26002 0.952 - 0.952 - - - - clathrin, heavy polypeptide (Hc) [Source:MGI Symbol;Acc:MGI:2388633]
38. Pkm ENSMUSG00000032294 110340 0.943 - 0.943 - - - - pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
39. Eef1b2 ENSMUSG00000025967 67373 0.942 - 0.942 - - - - eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
40. Ran ENSMUSG00000029430 58758 0.938 - 0.938 - - - - RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
41. Chchd2 ENSMUSG00000070493 83335 0.921 - 0.921 - - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
42. Ywhaq ENSMUSG00000076432 31004 0.917 - 0.917 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:MGI Symbol;Acc:MGI:891963]
43. Hnrnpa0 ENSMUSG00000007836 36645 0.896 - 0.896 - - - - heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
44. Adprh ENSMUSG00000002844 25667 0.89 - 0.890 - - - - ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
45. Hbb-y ENSMUSG00000052187 192024 0.816 - 0.816 - - - - hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
46. Stag1 ENSMUSG00000037286 6008 0.767 0.767 - - - - - stromal antigen 1 [Source:MGI Symbol;Acc:MGI:1098658]
47. Nfkbib ENSMUSG00000030595 1018 0.764 0.764 - - - - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta [Source:MGI Symbol;Acc:MGI:104752]
48. RP24-570C10.6 RP24-570C10.6 1922 0.76 0.760 - - - - -
49. Iscu ENSMUSG00000025825 1949 0.759 0.759 - - - - - iron-sulfur cluster assembly enzyme [Source:MGI Symbol;Acc:MGI:1913633]
50. Zmym2 ENSMUSG00000021945 4864 0.735 0.735 - - - - - zinc finger, MYM-type 2 [Source:MGI Symbol;Acc:MGI:1923257]
51. Dap3 ENSMUSG00000068921 2721 0.726 0.726 - - - - - death associated protein 3 [Source:MGI Symbol;Acc:MGI:1929538]
52. Higd1a ENSMUSG00000038412 727 0.716 0.716 - - - - - HIG1 domain family, member 1A [Source:MGI Symbol;Acc:MGI:1930666]
53. 1500026H17Rik ENSMUSG00000097383 939 0.715 0.715 - - - - - RIKEN cDNA 1500026H17 gene [Source:MGI Symbol;Acc:MGI:1916252]
54. Prpsap1 ENSMUSG00000015869 4275 0.712 0.712 - - - - - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:MGI Symbol;Acc:MGI:1915013]
55. Shmt1 ENSMUSG00000020534 2147 0.71 0.710 - - - - - serine hydroxymethyltransferase 1 (soluble) [Source:MGI Symbol;Acc:MGI:98299]
56. Smarca5 ENSMUSG00000031715 7025 0.706 0.706 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:MGI Symbol;Acc:MGI:1935129]
57. Ntm ENSMUSG00000059974 547 0.701 0.701 - - - - - neurotrimin [Source:MGI Symbol;Acc:MGI:2446259]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA