Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Lsm3

Gene Name Gene ID Reads Annotation
Lsm3 ENSMUSG00000034192 3539 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1914928]







Genes with expression patterns similar to Lsm3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lsm3 ENSMUSG00000034192 3539 6 1.000 1.000 1.000 1.000 1.000 1.000 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1914928]
2. Actl6a ENSMUSG00000027671 174 0.827 0.827 - - - - - actin-like 6A [Source:MGI Symbol;Acc:MGI:1861453]
3. Lsm11 ENSMUSG00000044847 1665 0.824 0.824 - - - - - U7 snRNP-specific Sm-like protein LSM11 [Source:MGI Symbol;Acc:MGI:1919540]
4. Gpbp1 ENSMUSG00000032745 5491 0.821 0.821 - - - - - GC-rich promoter binding protein 1 [Source:MGI Symbol;Acc:MGI:1920524]
5. Atl1 ENSMUSG00000021066 485 0.819 0.819 - - - - - atlastin GTPase 1 [Source:MGI Symbol;Acc:MGI:1921241]
6. Tnnt1 ENSMUSG00000064179 836 0.802 0.802 - - - - - troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
7. E330009J07Rik ENSMUSG00000037172 461 0.801 0.801 - - - - - RIKEN cDNA E330009J07 gene [Source:MGI Symbol;Acc:MGI:2444256]
8. Rasl12 ENSMUSG00000041696 228 0.801 0.801 - - - - - RAS-like, family 12 [Source:MGI Symbol;Acc:MGI:1918034]
9. AA987161 AA987161 597 0.801 0.801 - - - - -
10. Jmjd4 ENSMUSG00000036819 851 0.799 0.799 - - - - - jumonji domain containing 4 [Source:MGI Symbol;Acc:MGI:2144404]
11. Pex14 ENSMUSG00000028975 920 0.799 0.799 - - - - - peroxisomal biogenesis factor 14 [Source:MGI Symbol;Acc:MGI:1927868]
12. Gm4944 968 0.798 0.798 - - - - - predicted gene 4944
13. Fads3 ENSMUSG00000024664 192 0.798 0.798 - - - - - fatty acid desaturase 3 [Source:MGI Symbol;Acc:MGI:1928740]
14. Por ENSMUSG00000005514 877 0.798 0.798 - - - - - P450 (cytochrome) oxidoreductase [Source:MGI Symbol;Acc:MGI:97744]
15. Lrrc4b ENSMUSG00000047085 349 0.797 0.797 - - - - - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
16. Mfsd1 ENSMUSG00000027775 1963 0.796 0.796 - - - - - major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
17. Lurap1l ENSMUSG00000048706 165 0.796 0.796 - - - - - leucine rich adaptor protein 1-like [Source:MGI Symbol;Acc:MGI:106510]
18. Tmem87a ENSMUSG00000033808 199 0.795 0.795 - - - - - transmembrane protein 87A [Source:MGI Symbol;Acc:MGI:2441844]
19. Gm14951 ENSMUSG00000084776 22 0.795 0.795 - - - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
20. Gm11531 ENSMUSG00000075587 27 0.794 0.794 - - - - - predicted gene 11531 [Source:MGI Symbol;Acc:MGI:3650260]
21. Smim11 ENSMUSG00000051989 1776 0.794 0.794 - - - - - small integral membrane protein 11 [Source:MGI Symbol;Acc:MGI:1916186]
22. Slc13a4 ENSMUSG00000029843 66 0.794 0.794 - - - - - solute carrier family 13 (sodium/sulfate symporters), member 4 [Source:MGI Symbol;Acc:MGI:2442367]
23. Gm26659 ENSMUSG00000097609 40 0.794 0.794 - - - - - predicted gene, 26659 [Source:MGI Symbol;Acc:MGI:5477153]
24. Lamp5 ENSMUSG00000027270 112 0.794 0.794 - - - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
25. Rala ENSMUSG00000008859 4154 0.794 0.794 - - - - - v-ral simian leukemia viral oncogene A (ras related) [Source:MGI Symbol;Acc:MGI:1927243]
26. Slc17a9 ENSMUSG00000023393 165 0.793 0.793 - - - - - solute carrier family 17, member 9 [Source:MGI Symbol;Acc:MGI:1919107]
27. Gm5697 ENSMUSG00000081557 24 0.793 0.793 - - - - - predicted gene 5697 [Source:MGI Symbol;Acc:MGI:3649021]
28. Smc1b ENSMUSG00000022432 39 0.793 0.793 - - - - - structural maintenance of chromosomes 1B [Source:MGI Symbol;Acc:MGI:2154049]
29. 3010001F23Rik ENSMUSG00000084885 157 0.793 0.793 - - - - - RIKEN cDNA 3010001F23 gene [Source:MGI Symbol;Acc:MGI:1922943]
30. Gm5073 ENSMUSG00000083140 19 0.793 0.793 - - - - - predicted pseudogene 5073 [Source:MGI Symbol;Acc:MGI:3643718]
31. Gm4353 ENSMUSG00000091900 44 0.793 0.793 - - - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
32. Dnlz ENSMUSG00000075467 1790 0.793 0.793 - - - - - DNL-type zinc finger [Source:MGI Symbol;Acc:MGI:106559]
33. Tbc1d23 ENSMUSG00000022749 1006 0.792 0.792 - - - - - TBC1 domain family, member 23 [Source:MGI Symbol;Acc:MGI:1914831]
34. Gm4217 ENSMUSG00000097954 30 0.79 0.790 - - - - - predicted gene 4217 [Source:MGI Symbol;Acc:MGI:3782393]
35. Serpinb1b ENSMUSG00000051029 30 0.79 0.790 - - - - - serine (or cysteine) peptidase inhibitor, clade B, member 1b [Source:MGI Symbol;Acc:MGI:2445361]
36. Dhrs13 ENSMUSG00000020834 657 0.79 0.790 - - - - - dehydrogenase/reductase (SDR family) member 13 [Source:MGI Symbol;Acc:MGI:1917701]
37. Dnaaf2 ENSMUSG00000020973 1187 0.79 0.790 - - - - - dynein, axonemal assembly factor 2 [Source:MGI Symbol;Acc:MGI:1923566]
38. Ogfrl1 ENSMUSG00000026158 1984 0.79 0.790 - - - - - opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]
39. 4930441O14Rik 4930441O14Rik 43 0.789 0.789 - - - - -
40. Ecscr ENSMUSG00000073599 244 0.789 0.789 - - - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:MGI Symbol;Acc:MGI:1915795]
41. Trip6 ENSMUSG00000023348 4183 0.788 0.788 - - - - - thyroid hormone receptor interactor 6 [Source:MGI Symbol;Acc:MGI:1343458]
42. Ddit4 ENSMUSG00000020108 411 0.788 0.788 - - - - - DNA-damage-inducible transcript 4 [Source:MGI Symbol;Acc:MGI:1921997]
43. Zfp689 ENSMUSG00000048921 105 0.787 0.787 - - - - - zinc finger protein 689 [Source:MGI Symbol;Acc:MGI:1918381]
44. Gm9776 ENSMUSG00000042857 174 0.787 0.787 - - - - - predicted gene 9776 [Source:MGI Symbol;Acc:MGI:3641792]
45. Slc38a7 ENSMUSG00000036534 269 0.787 0.787 - - - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
46. Prl3b1 ENSMUSG00000038891 69 0.787 0.787 - - - - - prolactin family 3, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:97607]
47. Ripk3 ENSMUSG00000022221 346 0.787 0.787 - - - - - receptor-interacting serine-threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2154952]
48. Thg1l ENSMUSG00000011254 324 0.786 0.786 - - - - - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913878]
49. Gm15443 ENSMUSG00000082588 32 0.785 0.785 - - - - - predicted gene 15443 [Source:MGI Symbol;Acc:MGI:3642525]
50. Samd15 ENSMUSG00000090812 66 0.783 0.783 - - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
51. Vamp2 ENSMUSG00000020894 1819 0.78 0.780 - - - - - vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
52. AA386476 ENSMUSG00000074357 185 0.779 0.779 - - - - - expressed sequence AA386476 [Source:MGI Symbol;Acc:MGI:3034595]
53. Lins Lins 913 0.779 0.779 - - - - -
54. Cd68 ENSMUSG00000018774 174 0.778 0.778 - - - - - CD68 antigen [Source:MGI Symbol;Acc:MGI:88342]
55. Pnpo ENSMUSG00000018659 322 0.778 0.778 - - - - - pyridoxine 5'-phosphate oxidase [Source:MGI Symbol;Acc:MGI:2144151]
56. Bysl ENSMUSG00000023988 1632 0.778 0.778 - - - - - bystin-like [Source:MGI Symbol;Acc:MGI:1858419]
57. Ceacam1 ENSMUSG00000074272 190 0.777 0.777 - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1347245]
58. 6430590A07Rik ENSMUSG00000097583, ENSMUSG00000116278 241 0.776 0.776 - - - - - RIKEN cDNA 6430590A07 gene [Source:MGI Symbol;Acc:MGI:3648839]
59. Serpini1 ENSMUSG00000027834 289 0.775 0.775 - - - - - serine (or cysteine) peptidase inhibitor, clade I, member 1 [Source:MGI Symbol;Acc:MGI:1194506]
60. 4632404H12Rik ENSMUSG00000042579 118 0.775 0.775 - - - - - RIKEN cDNA 4632404H12 gene [Source:MGI Symbol;Acc:MGI:1921284]
61. Cox10 ENSMUSG00000042148 1382 0.774 0.774 - - - - - heme A:farnesyltransferase cytochrome c oxidase assembly factor 10 [Source:MGI Symbol;Acc:MGI:1917633]
62. Mettl17 ENSMUSG00000004561 924 0.773 0.773 - - - - - methyltransferase like 17 [Source:MGI Symbol;Acc:MGI:1098577]
63. Wbscr27 260 0.773 0.773 - - - - - Williams Beuren syndrome chromosome region 27 (human), transcript variant X10
64. Gabbr1 ENSMUSG00000024462 2045 0.772 0.772 - - - - - gamma-aminobutyric acid (GABA) B receptor, 1 [Source:MGI Symbol;Acc:MGI:1860139]
65. Baz1a ENSMUSG00000035021 5091 0.771 0.771 - - - - - bromodomain adjacent to zinc finger domain 1A [Source:MGI Symbol;Acc:MGI:1309478]
66. Slc22a15 ENSMUSG00000033147 417 0.771 0.771 - - - - - solute carrier family 22 (organic anion/cation transporter), member 15 [Source:MGI Symbol;Acc:MGI:3607704]
67. Gm7027 ENSMUSG00000067121 324 0.77 0.770 - - - - - predicted gene 7027 [Source:MGI Symbol;Acc:MGI:3644555]
68. Lrrc27 ENSMUSG00000015980, ENSMUSG00000111011 83 0.77 0.770 - - - - - leucine rich repeat containing 27 [Source:MGI Symbol;Acc:MGI:1923862]
69. Mapk7 ENSMUSG00000001034 2601 0.768 0.768 - - - - - mitogen-activated protein kinase 7 [Source:MGI Symbol;Acc:MGI:1346347]
70. E130307A14Rik ENSMUSG00000087177 1348 0.767 0.767 - - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
71. Frk ENSMUSG00000019779 639 0.767 0.767 - - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
72. 2210016L21Rik ENSMUSG00000029559 1199 0.767 0.767 - - - - - RIKEN cDNA 2210016L21 gene [Source:MGI Symbol;Acc:MGI:1919607]
73. Leprel2 Leprel2 1004 0.767 0.767 - - - - -
74. Med27 ENSMUSG00000026799 923 0.766 0.766 - - - - - mediator complex subunit 27 [Source:MGI Symbol;Acc:MGI:1916225]
75. Pex1 ENSMUSG00000005907 371 0.765 0.765 - - - - - peroxisomal biogenesis factor 1 [Source:MGI Symbol;Acc:MGI:1918632]
76. Fcor ENSMUSG00000089665 178 0.765 0.765 - - - - - Foxo1 corepressor [Source:MGI Symbol;Acc:MGI:1915484]
77. Mthfd2 ENSMUSG00000005667 1558 0.765 0.765 - - - - - methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase [Source:MGI Symbol;Acc:MGI:1338850]
78. Lhx6 ENSMUSG00000026890 107 0.764 0.764 - - - - - LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]
79. Gm11496 ENSMUSG00000085152 340 0.764 0.764 - - - - - predicted gene 11496 [Source:MGI Symbol;Acc:MGI:3649410]
80. Ces2b ENSMUSG00000050097 81 0.764 0.764 - - - - - carboxyesterase 2B [Source:MGI Symbol;Acc:MGI:2448547]
81. Acox3 ENSMUSG00000029098 279 0.764 0.764 - - - - - acyl-Coenzyme A oxidase 3, pristanoyl [Source:MGI Symbol;Acc:MGI:1933156]
82. Ankrd52 ENSMUSG00000014498 262 0.763 0.763 - - - - - ankyrin repeat domain 52 [Source:MGI Symbol;Acc:MGI:2444029]
83. Hip1r ENSMUSG00000000915 230 0.762 0.762 - - - - - huntingtin interacting protein 1 related [Source:MGI Symbol;Acc:MGI:1352504]
84. Adrbk2 496 0.762 0.762 - - - - - adrenergic receptor kinase, beta 2, transcript variant X4
85. Srr ENSMUSG00000001323 373 0.761 0.761 - - - - - serine racemase [Source:MGI Symbol;Acc:MGI:1351636]
86. Vwf ENSMUSG00000001930 658 0.761 0.761 - - - - - Von Willebrand factor [Source:MGI Symbol;Acc:MGI:98941]
87. Sobp ENSMUSG00000038248 553 0.761 0.761 - - - - - sine oculis binding protein [Source:MGI Symbol;Acc:MGI:1924427]
88. Gm26869 ENSMUSG00000097879 104 0.761 0.761 - - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
89. Isca1 ENSMUSG00000044792 248 0.759 0.759 - - - - - iron-sulfur cluster assembly 1 [Source:MGI Symbol;Acc:MGI:1916296]
90. Zfp40 ENSMUSG00000002617 724 0.759 0.759 - - - - - zinc finger protein 40 [Source:MGI Symbol;Acc:MGI:99185]
91. 2810408M09Rik 2810408M09Rik 489 0.757 0.757 - - - - -
92. Maneal ENSMUSG00000042763 300 0.757 0.757 - - - - - mannosidase, endo-alpha-like [Source:MGI Symbol;Acc:MGI:2684896]
93. Itpripl2 ENSMUSG00000095115 287 0.756 0.756 - - - - - inositol 1,4,5-triphosphate receptor interacting protein-like 2 [Source:MGI Symbol;Acc:MGI:2442416]
94. Atg12 ENSMUSG00000032905 4891 0.756 0.756 - - - - - autophagy related 12 [Source:MGI Symbol;Acc:MGI:1914776]
95. Naglu ENSMUSG00000001751 142 0.755 0.755 - - - - - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) [Source:MGI Symbol;Acc:MGI:1351641]
96. Znhit3 ENSMUSG00000020526 457 0.755 0.755 - - - - - zinc finger, HIT type 3 [Source:MGI Symbol;Acc:MGI:3051596]
97. 2210015D19Rik 2210015D19Rik 1089 0.754 0.754 - - - - -
98. Sema6d ENSMUSG00000027200 1413 0.753 0.753 - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
99. Pbx4 ENSMUSG00000031860 575 0.753 0.753 - - - - - pre B cell leukemia homeobox 4 [Source:MGI Symbol;Acc:MGI:1931321]
100. Mfap3l ENSMUSG00000031647 247 0.753 0.753 - - - - - microfibrillar-associated protein 3-like [Source:MGI Symbol;Acc:MGI:1918556]

There are 93 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA