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Results for Lmx1b

Gene Name Gene ID Reads Annotation
Lmx1b ENSMUSG00000038765 683 LIM homeobox transcription factor 1 beta [Source:MGI Symbol;Acc:MGI:1100513]







Genes with expression patterns similar to Lmx1b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lmx1b ENSMUSG00000038765 683 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox transcription factor 1 beta [Source:MGI Symbol;Acc:MGI:1100513]
2. Zic3 ENSMUSG00000067860 549 1.672 - - - 0.833 0.839 - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
3. Ildr2 ENSMUSG00000040612 1142 1.656 - - - 0.762 - 0.894 immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
4. Ckb ENSMUSG00000001270 8443 1.583 - - - 0.733 - 0.850 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
5. Hoxd3 ENSMUSG00000079277 3066 1.576 - - - 0.767 - 0.809 homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]
6. Hoxd1 ENSMUSG00000042448 332 1.455 - - - 0.709 0.746 - homeobox D1 [Source:MGI Symbol;Acc:MGI:96201]
7. Sall3 ENSMUSG00000024565 449 0.946 - - - - - 0.946 spalt like transcription factor 3 [Source:MGI Symbol;Acc:MGI:109295]
8. Draxin ENSMUSG00000029005 726 0.941 - - - - - 0.941 dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
9. Acsl6 ENSMUSG00000020333 249 0.933 - - - - - 0.933 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
10. Cish ENSMUSG00000032578 239 0.932 - - - - - 0.932 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
11. Ostm1 ENSMUSG00000038280 208 0.926 - - - - - 0.926 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
12. Hes3 ENSMUSG00000028946 73 0.926 - - - - - 0.926 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
13. Ufsp1 ENSMUSG00000051502 251 0.925 - - - - - 0.925 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
14. Recql5 ENSMUSG00000020752 591 0.924 - - - - - 0.924 RecQ protein-like 5 [Source:MGI Symbol;Acc:MGI:2156841]
15. 9130023H24Rik ENSMUSG00000062944 258 0.924 - - - - - 0.924 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
16. Amd1 ENSMUSG00000075232 1041 0.924 - - - - - 0.924 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
17. Hbb-bs ENSMUSG00000052305 2551 0.923 - - - - - 0.923 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
18. Adcyap1r1 ENSMUSG00000029778 817 0.923 - - - - - 0.923 adenylate cyclase activating polypeptide 1 receptor 1 [Source:MGI Symbol;Acc:MGI:108449]
19. Ctsc ENSMUSG00000030560 650 0.923 - - - - - 0.923 cathepsin C [Source:MGI Symbol;Acc:MGI:109553]
20. Homer3 ENSMUSG00000003573 2190 0.921 - - - - - 0.921 homer scaffolding protein 3 [Source:MGI Symbol;Acc:MGI:1347359]
21. Fam131a ENSMUSG00000050821 113 0.92 - - - - - 0.920 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
22. Ttc7 ENSMUSG00000036918 154 0.92 - - - - - 0.920 tetratricopeptide repeat domain 7 [Source:MGI Symbol;Acc:MGI:1920999]
23. Pfkfb2 ENSMUSG00000026409 480 0.92 - - - - - 0.920 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
24. Sh3rf2 ENSMUSG00000057719 60 0.919 - - - - - 0.919 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
25. Gm24451 ENSMUSG00000065287 57 0.919 - - - - - 0.919 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
26. Htr1b ENSMUSG00000049511 77 0.919 - - - - - 0.919 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
27. Ctla2a ENSMUSG00000044258 507 0.919 - - - - - 0.919 cytotoxic T lymphocyte-associated protein 2 alpha [Source:MGI Symbol;Acc:MGI:88554]
28. Stbd1 ENSMUSG00000047963 377 0.918 - - - - - 0.918 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
29. Lgr5 ENSMUSG00000020140 516 0.918 - - - - - 0.918 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
30. Phf19 ENSMUSG00000026873 83 0.918 - - - - - 0.918 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
31. Gm13910 ENSMUSG00000063684 126 0.918 - - - - - 0.918 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
32. Gm13476 Gm13476 165 0.918 - - - - - 0.918
33. Gm14286 ENSMUSG00000087445 166 0.918 - - - - - 0.918 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
34. Trak1 ENSMUSG00000032536 705 0.917 - - - - - 0.917 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
35. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.917 - - - - - 0.917 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
36. 2310015A10Rik ENSMUSG00000097729 199 0.917 - - - - - 0.917 RIKEN cDNA 2310015A10 gene [Source:MGI Symbol;Acc:MGI:1916798]
37. Paxbp1 ENSMUSG00000022974 322 0.916 - - - - - 0.916 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
38. Gm10307 ENSMUSG00000101093 159 0.915 - - - - - 0.915 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
39. St18 ENSMUSG00000033740 408 0.915 - - - - - 0.915 suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
40. Il17d ENSMUSG00000050222 119 0.915 - - - - - 0.915 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
41. 5930412G12Rik ENSMUSG00000072591 503 0.914 - - - - - 0.914 RIKEN cDNA 5930412G12 gene [Source:MGI Symbol;Acc:MGI:2442398]
42. Atp8a1 ENSMUSG00000037685 1155 0.914 - - - - - 0.914 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
43. Dach1 ENSMUSG00000055639 1422 0.914 - - - - - 0.914 dachshund family transcription factor 1 [Source:MGI Symbol;Acc:MGI:1277991]
44. Atp6ap1 ENSMUSG00000019087 614 0.913 - - - - - 0.913 ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629]
45. Rad51ap1 ENSMUSG00000030346 1698 0.912 - - - - - 0.912 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
46. Tspan13 ENSMUSG00000020577 1613 0.912 - - - - - 0.912 tetraspanin 13 [Source:MGI Symbol;Acc:MGI:1913359]
47. Pcdha2 ENSMUSG00000104148 246 0.911 - - - - - 0.911 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
48. Blmh ENSMUSG00000020840 2762 0.91 - - - - - 0.910 bleomycin hydrolase [Source:MGI Symbol;Acc:MGI:1345186]
49. Pdp2 ENSMUSG00000048371 637 0.909 - - - - - 0.909 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
50. Zzef1 ENSMUSG00000055670 953 0.909 - - - - - 0.909 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
51. Car2 ENSMUSG00000027562 1176 0.909 - - - - - 0.909 carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
52. BC026585 1005 0.909 - - - - - 0.909 cDNA sequence BC026585, transcript variant X1
53. Lhpp ENSMUSG00000030946 365 0.908 - - - - - 0.908 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
54. Hddc3 ENSMUSG00000030532 213 0.907 - - - - - 0.907 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
55. Dusp2 ENSMUSG00000027368 534 0.907 - - - - - 0.907 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
56. Dtd1 ENSMUSG00000027430 447 0.906 - - - - - 0.906 D-tyrosyl-tRNA deacylase 1 [Source:MGI Symbol;Acc:MGI:1913294]
57. Npr3 ENSMUSG00000022206 2321 0.906 - - - - - 0.906 natriuretic peptide receptor 3 [Source:MGI Symbol;Acc:MGI:97373]
58. Mdga1 ENSMUSG00000043557 531 0.906 - - - - - 0.906 MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:MGI Symbol;Acc:MGI:1922012]
59. Phf12 ENSMUSG00000037791 554 0.906 - - - - - 0.906 PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
60. Smug1 ENSMUSG00000036061 1056 0.906 - - - - - 0.906 single-strand selective monofunctional uracil DNA glycosylase [Source:MGI Symbol;Acc:MGI:1918976]
61. Hbb-bt ENSMUSG00000073940 12887 0.905 - - - - - 0.905 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
62. Rrp8 ENSMUSG00000030888 887 0.905 - - - - - 0.905 ribosomal RNA processing 8, methyltransferase, homolog (yeast) [Source:MGI Symbol;Acc:MGI:1914251]
63. Ppt2 ENSMUSG00000015474 321 0.905 - - - - - 0.905 palmitoyl-protein thioesterase 2 [Source:MGI Symbol;Acc:MGI:1860075]
64. Tnrc18 ENSMUSG00000039477 1051 0.905 - - - - - 0.905 trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
65. Cdc25b ENSMUSG00000027330 1004 0.905 - - - - - 0.905 cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
66. Aspscr1 ENSMUSG00000025142 694 0.905 - - - - - 0.905 alveolar soft part sarcoma chromosome region, candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1916188]
67. Mcm8 ENSMUSG00000027353 1598 0.905 - - - - - 0.905 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
68. Ppcs ENSMUSG00000028636 669 0.904 - - - - - 0.904 phosphopantothenoylcysteine synthetase [Source:MGI Symbol;Acc:MGI:1915237]
69. Ccdc91 ENSMUSG00000030301 664 0.903 - - - - - 0.903 coiled-coil domain containing 91 [Source:MGI Symbol;Acc:MGI:1914265]
70. Unc45a ENSMUSG00000030533 852 0.903 - - - - - 0.903 unc-45 myosin chaperone A [Source:MGI Symbol;Acc:MGI:2142246]
71. Bcr ENSMUSG00000009681 588 0.903 - - - - - 0.903 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
72. Vps45 ENSMUSG00000015747 406 0.902 - - - - - 0.902 vacuolar protein sorting 45 [Source:MGI Symbol;Acc:MGI:891965]
73. Alkbh4 ENSMUSG00000039754 367 0.901 - - - - - 0.901 alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
74. Ftx ENSMUSG00000086370 285 0.901 - - - - - 0.901 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
75. Hoxb5 ENSMUSG00000038700 2439 0.901 - - - - - 0.901 homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
76. Gtf2f2 ENSMUSG00000067995 1487 0.9 - - - - - 0.900 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
77. Dfna5 492 0.899 - - - - - 0.899 deafness, autosomal dominant 5 (human), transcript variant X3
78. B3galtl B3galtl 1530 0.898 - - - - - 0.898
79. Ndufb11 ENSMUSG00000031059 4781 0.898 - - - - - 0.898 NADH:ubiquinone oxidoreductase subunit B11 [Source:MGI Symbol;Acc:MGI:1349919]
80. Stk25 ENSMUSG00000026277 2131 0.897 - - - - - 0.897 serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
81. Trdmt1 ENSMUSG00000026723 391 0.897 - - - - - 0.897 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
82. Mt2 ENSMUSG00000031762 1817 0.897 - - - - - 0.897 metallothionein 2 [Source:MGI Symbol;Acc:MGI:97172]
83. Gpr108 ENSMUSG00000005823 539 0.897 - - - - - 0.897 G protein-coupled receptor 108 [Source:MGI Symbol;Acc:MGI:1925558]
84. Slc1a2 ENSMUSG00000005089 830 0.896 - - - - - 0.896 solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
85. Vimp 1184 0.895 - - - - - 0.895 VCP-interacting membrane protein
86. Pik3c2b ENSMUSG00000026447 424 0.895 - - - - - 0.895 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:MGI Symbol;Acc:MGI:2685045]
87. Pdss2 ENSMUSG00000038240 749 0.893 - - - - - 0.893 prenyl (solanesyl) diphosphate synthase, subunit 2 [Source:MGI Symbol;Acc:MGI:1918615]
88. Taz ENSMUSG00000009995 1408 0.893 - - - - - 0.893 tafazzin [Source:MGI Symbol;Acc:MGI:109626]
89. Fut10 ENSMUSG00000046152 702 0.893 - - - - - 0.893 fucosyltransferase 10 [Source:MGI Symbol;Acc:MGI:2384748]
90. Tubb4b ENSMUSG00000036752 6429 0.893 - - - - - 0.893 tubulin, beta 4B class IVB [Source:MGI Symbol;Acc:MGI:1915472]
91. Mbd1 ENSMUSG00000024561 619 0.892 - - - - - 0.892 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
92. Fancl ENSMUSG00000004018 569 0.892 - - - - - 0.892 Fanconi anemia, complementation group L [Source:MGI Symbol;Acc:MGI:1914280]
93. Prkaa1 ENSMUSG00000050697 591 0.891 - - - - - 0.891 protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
94. Slc25a53 ENSMUSG00000044348 516 0.89 - - - - - 0.890 solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
95. Wipi1 ENSMUSG00000041895 3789 0.889 - - - - - 0.889 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
96. Coq3 ENSMUSG00000028247 463 0.889 - - - - - 0.889 coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
97. Chst10 ENSMUSG00000026080 667 0.888 - - - - - 0.888 carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
98. Tbc1d20 ENSMUSG00000027465 1026 0.887 - - - - - 0.887 TBC1 domain family, member 20 [Source:MGI Symbol;Acc:MGI:1914481]
99. Asah1 ENSMUSG00000031591 856 0.886 - - - - - 0.886 N-acylsphingosine amidohydrolase 1 [Source:MGI Symbol;Acc:MGI:1277124]
100. Zfyve19 ENSMUSG00000068580 337 0.886 - - - - - 0.886 zinc finger, FYVE domain containing 19 [Source:MGI Symbol;Acc:MGI:1919258]

There are 393 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA