Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Lmx1a

Gene Name Gene ID Reads Annotation
Lmx1a ENSMUSG00000026686 123 LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]







Genes with expression patterns similar to Lmx1a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lmx1a ENSMUSG00000026686 123 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
2. Atoh1 ENSMUSG00000073043 396 2.625 0.909 0.813 0.903 - - - atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
3. Barhl1 ENSMUSG00000026805 447 2.587 0.873 0.812 0.902 - - - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
4. Wnt1 ENSMUSG00000022997 961 2.585 0.879 0.803 0.903 - - - wingless-type MMTV integration site family, member 1 [Source:MGI Symbol;Acc:MGI:98953]
5. Gm15366 ENSMUSG00000080726 11 1.789 0.899 - 0.890 - - - predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
6. Wnt3a ENSMUSG00000009900 70 1.759 0.856 - 0.903 - - - wingless-type MMTV integration site family, member 3A [Source:MGI Symbol;Acc:MGI:98956]
7. Barhl2 ENSMUSG00000034384 99 1.711 0.899 0.812 - - - - BarH like homeobox 2 [Source:MGI Symbol;Acc:MGI:1859314]
8. Pla2g7 ENSMUSG00000023913 28 1.637 0.743 - 0.894 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:MGI Symbol;Acc:MGI:1351327]
9. Igfbpl1 ENSMUSG00000035551 856 1.633 0.798 - 0.835 - - - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
10. Ddn ENSMUSG00000059213 51 1.63 - - 0.903 - - 0.727 dendrin [Source:MGI Symbol;Acc:MGI:108101]
11. Cldn2 ENSMUSG00000047230 21 1.617 - - - - 0.713 0.904 claudin 2 [Source:MGI Symbol;Acc:MGI:1276110]
12. Olig3 ENSMUSG00000045591 1049 1.605 0.837 - 0.768 - - - oligodendrocyte transcription factor 3 [Source:MGI Symbol;Acc:MGI:2149955]
13. Rassf4 ENSMUSG00000042129 1399 1.593 - 0.732 0.861 - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
14. Rspo3 ENSMUSG00000019880 485 1.531 0.749 - 0.782 - - - R-spondin 3 [Source:MGI Symbol;Acc:MGI:1920030]
15. Gm10837 ENSMUSG00000075465 36 1.524 0.793 - - - - 0.731 predicted gene 10837 [Source:MGI Symbol;Acc:MGI:3642026]
16. Hoxb3os ENSMUSG00000084844 82 1.426 0.725 - 0.701 - - - homeobox B3 and homeobox B2, opposite strand [Source:MGI Symbol;Acc:MGI:103211]
17. Lrrc29 ENSMUSG00000041679 19 0.927 - - - - - 0.927 leucine rich repeat containing 29 [Source:MGI Symbol;Acc:MGI:2443262]
18. 4931403E22Rik ENSMUSG00000093772 3 0.927 - - - - - 0.927 RIKEN cDNA 4931403E22 gene [Source:MGI Symbol;Acc:MGI:1918192]
19. Krt73 ENSMUSG00000063661 3 0.927 - - - - - 0.927 keratin 73 [Source:MGI Symbol;Acc:MGI:3607712]
20. Gpr149 ENSMUSG00000043441 6 0.927 - - - - - 0.927 G protein-coupled receptor 149 [Source:MGI Symbol;Acc:MGI:2443628]
21. Sptlc3 ENSMUSG00000039092 6 0.927 - - - - - 0.927 serine palmitoyltransferase, long chain base subunit 3 [Source:MGI Symbol;Acc:MGI:2444678]
22. Pth2r ENSMUSG00000025946 5 0.927 - - - - - 0.927 parathyroid hormone 2 receptor [Source:MGI Symbol;Acc:MGI:2180917]
23. Gm8566 ENSMUSG00000047905 10 0.927 - - - - - 0.927 predicted pseudogene 8566 [Source:MGI Symbol;Acc:MGI:3647296]
24. Gm16158 ENSMUSG00000086410 4 0.927 - - - - - 0.927 predicted gene 16158 [Source:MGI Symbol;Acc:MGI:3801750]
25. 1700041G16Rik ENSMUSG00000054822 3 0.927 - - - - - 0.927 RIKEN cDNA 1700041G16 gene [Source:MGI Symbol;Acc:MGI:1920549]
26. Acot3 ENSMUSG00000021228 4 0.927 - - - - - 0.927 acyl-CoA thioesterase 3 [Source:MGI Symbol;Acc:MGI:2159619]
27. Gm7670 ENSMUSG00000082608 3 0.927 - - - - - 0.927 predicted gene 7670 [Source:MGI Symbol;Acc:MGI:3648912]
28. Sgcz ENSMUSG00000039539 10 0.925 - - - - - 0.925 sarcoglycan zeta [Source:MGI Symbol;Acc:MGI:2388820]
29. Wnt9a ENSMUSG00000000126 90 0.922 - - 0.922 - - - wingless-type MMTV integration site family, member 9A [Source:MGI Symbol;Acc:MGI:2446084]
30. Vcl ENSMUSG00000021823 49 0.909 - - 0.909 - - - vinculin [Source:MGI Symbol;Acc:MGI:98927]
31. Col7a1 ENSMUSG00000025650 32 0.909 - - - - - 0.909 collagen, type VII, alpha 1 [Source:MGI Symbol;Acc:MGI:88462]
32. Gm16136 ENSMUSG00000089804 37 0.908 - - - - - 0.908 predicted gene 16136 [Source:MGI Symbol;Acc:MGI:3802137]
33. Gm11280 ENSMUSG00000085393 24 0.908 - - 0.908 - - - predicted gene 11280 [Source:MGI Symbol;Acc:MGI:3705200]
34. 2310042D19Rik 2310042D19Rik 7 0.908 - - 0.908 - - -
35. Fn3k ENSMUSG00000025175 18 0.906 - - 0.906 - - - fructosamine 3 kinase [Source:MGI Symbol;Acc:MGI:1926834]
36. Gm973 ENSMUSG00000047361 11 0.905 - - 0.905 - - - predicted gene 973 [Source:MGI Symbol;Acc:MGI:2685819]
37. Gm24049 ENSMUSG00000076364 20 0.904 - - 0.904 - - - predicted gene, 24049 [Source:MGI Symbol;Acc:MGI:5453826]
38. Gm13841 ENSMUSG00000083833 17 0.904 - - - - - 0.904 predicted gene 13841 [Source:MGI Symbol;Acc:MGI:3650890]
39. Tldc1 ENSMUSG00000034105 8 0.904 - - 0.904 - - - TBC/LysM associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1921597]
40. Gm16585 ENSMUSG00000089657 13 0.903 - - 0.903 - - - predicted gene 16585 [Source:MGI Symbol;Acc:MGI:4415005]
41. Gm12412 ENSMUSG00000083685 7 0.903 - - 0.903 - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
42. Gm24611 ENSMUSG00000065206 4 0.903 - - 0.903 - - - predicted gene, 24611 [Source:MGI Symbol;Acc:MGI:5454388]
43. Ccr9 ENSMUSG00000029530 12 0.903 - - 0.903 - - - chemokine (C-C motif) receptor 9 [Source:MGI Symbol;Acc:MGI:1341902]
44. 3100002H09Rik ENSMUSG00000051219 11 0.902 - - 0.902 - - - RIKEN cDNA 3100002H09 gene [Source:MGI Symbol;Acc:MGI:1917499]
45. Cdh20 ENSMUSG00000050840 15 0.902 0.902 - - - - - cadherin 20 [Source:MGI Symbol;Acc:MGI:1346069]
46. Abcb8 ENSMUSG00000028973 649 0.902 - - 0.902 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:MGI Symbol;Acc:MGI:1351667]
47. Nlrc4 ENSMUSG00000039193 9 0.901 - - 0.901 - - - NLR family, CARD domain containing 4 [Source:MGI Symbol;Acc:MGI:3036243]
48. Ddx43 ENSMUSG00000070291 17 0.9 - - 0.900 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
49. Gm26801 ENSMUSG00000097892 60 0.9 - - 0.900 - - - predicted gene, 26801 [Source:MGI Symbol;Acc:MGI:5477295]
50. Rgs9 ENSMUSG00000020599 31 0.9 - - 0.900 - - - regulator of G-protein signaling 9 [Source:MGI Symbol;Acc:MGI:1338824]
51. Gm7860 ENSMUSG00000082535 15 0.898 - - 0.898 - - - predicted gene 7860 [Source:MGI Symbol;Acc:MGI:3644843]
52. Gm14634 ENSMUSG00000085891 18 0.897 - - 0.897 - - - predicted gene 14634 [Source:MGI Symbol;Acc:MGI:3705147]
53. A230028O05Rik ENSMUSG00000096960 7 0.897 - - - - - 0.897 RIKEN cDNA A230028O05 gene [Source:MGI Symbol;Acc:MGI:2442126]
54. Gm11615 ENSMUSG00000085083 13 0.896 - - 0.896 - - - predicted gene 11615 [Source:MGI Symbol;Acc:MGI:3652280]
55. 1700104B16Rik ENSMUSG00000049476 10 0.896 - - - - - 0.896 RIKEN cDNA 1700104B16 gene [Source:MGI Symbol;Acc:MGI:1925886]
56. Foxj1 ENSMUSG00000034227 14 0.894 - - - - - 0.894 forkhead box J1 [Source:MGI Symbol;Acc:MGI:1347474]
57. Foxl2 ENSMUSG00000050397 13 0.894 - - - - - 0.894 forkhead box L2 [Source:MGI Symbol;Acc:MGI:1349428]
58. Hesx1 ENSMUSG00000040726 13 0.894 - - - - - 0.894 homeobox gene expressed in ES cells [Source:MGI Symbol;Acc:MGI:96071]
59. Cav2 ENSMUSG00000000058 36 0.894 - - 0.894 - - - caveolin 2 [Source:MGI Symbol;Acc:MGI:107571]
60. Kcne4 ENSMUSG00000047330 52 0.894 - - 0.894 - - - potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
61. Gm17455 ENSMUSG00000090439 8 0.892 - - - - - 0.892 predicted gene, 17455 [Source:MGI Symbol;Acc:MGI:4937089]
62. Gabrr2 ENSMUSG00000023267 15 0.891 - - - - - 0.891 gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 [Source:MGI Symbol;Acc:MGI:95626]
63. Hist1h2bg ENSMUSG00000058385 62 0.891 - - 0.891 - - - histone cluster 1, H2bg [Source:MGI Symbol;Acc:MGI:2448386]
64. Zan ENSMUSG00000079173 25 0.89 - - - - - 0.890 zonadhesin [Source:MGI Symbol;Acc:MGI:106656]
65. Sost ENSMUSG00000001494 46 0.89 - - - - - 0.890 sclerostin [Source:MGI Symbol;Acc:MGI:1921749]
66. Fbxo2 ENSMUSG00000041556 15 0.889 - - 0.889 - - - F-box protein 2 [Source:MGI Symbol;Acc:MGI:2446216]
67. Rxfp2 ENSMUSG00000053368 56 0.888 - - 0.888 - - - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
68. Acvr1c ENSMUSG00000026834 20 0.887 - - - - - 0.887 activin A receptor, type IC [Source:MGI Symbol;Acc:MGI:2661081]
69. 2010315B03Rik ENSMUSG00000074829, ENSMUSG00000098810 29 0.885 - - 0.885 - - - RIKEN cDNA 2010315B03 gene [Source:MGI Symbol;Acc:MGI:1919321]
70. Rccd1 ENSMUSG00000038930 21 0.885 - - 0.885 - - - RCC1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2444156]
71. Zfp663 ENSMUSG00000056824 62 0.883 - - 0.883 - - - zinc finger protein 663 [Source:MGI Symbol;Acc:MGI:2685854]
72. Hectd2 ENSMUSG00000041180 34 0.883 - - 0.883 - - - HECT domain E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2442663]
73. Dennd2d ENSMUSG00000027901 12 0.883 - - 0.883 - - - DENN/MADD domain containing 2D [Source:MGI Symbol;Acc:MGI:2181193]
74. Dync1i1 ENSMUSG00000029757 144 0.882 - - 0.882 - - - dynein cytoplasmic 1 intermediate chain 1 [Source:MGI Symbol;Acc:MGI:107743]
75. Gm27032 ENSMUSG00000098051 80 0.88 - - 0.880 - - - predicted gene, 27032 [Source:MGI Symbol;Acc:MGI:5504147]
76. Syp ENSMUSG00000031144 41 0.88 - - 0.880 - - - synaptophysin [Source:MGI Symbol;Acc:MGI:98467]
77. 4930570N19Rik 4930570N19Rik 13 0.879 - - - - - 0.879
78. Tfr2 ENSMUSG00000029716 51 0.879 - - - - - 0.879 transferrin receptor 2 [Source:MGI Symbol;Acc:MGI:1354956]
79. Wdr65 Wdr65 40 0.877 - - 0.877 - - -
80. D330050G23Rik ENSMUSG00000085316 11 0.877 - - - - - 0.877 RIKEN cDNA D330050G23 gene [Source:MGI Symbol;Acc:MGI:2445155]
81. Gm24616 ENSMUSG00000065208 48 0.877 - - 0.877 - - - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
82. 1700030J22Rik ENSMUSG00000031847 46 0.877 - - 0.877 - - - RIKEN cDNA 1700030J22 gene [Source:MGI Symbol;Acc:MGI:1916778]
83. Them6 ENSMUSG00000056665 39 0.876 - - - - - 0.876 thioesterase superfamily member 6 [Source:MGI Symbol;Acc:MGI:1925301]
84. Prss22 ENSMUSG00000045027 20 0.876 - - - - - 0.876 protease, serine 22 [Source:MGI Symbol;Acc:MGI:1918085]
85. Gm4221 ENSMUSG00000096948 9 0.876 - - - - - 0.876 predicted gene 4221 [Source:MGI Symbol;Acc:MGI:3782397]
86. Gm25635 ENSMUSG00000064609 19 0.875 - - 0.875 - - - predicted gene, 25635 [Source:MGI Symbol;Acc:MGI:5455412]
87. 2610035F20Rik ENSMUSG00000085555 139 0.873 - - - - - 0.873 RIKEN cDNA 2610035F20 gene [Source:MGI Symbol;Acc:MGI:1916498]
88. Sep-01 Sep-01 32 0.873 - - 0.873 - - -
89. Fam71e1 ENSMUSG00000051113 33 0.873 - - 0.873 - - - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
90. Gm13039 ENSMUSG00000083826 11 0.87 - - 0.870 - - - predicted gene 13039 [Source:MGI Symbol;Acc:MGI:3649997]
91. Gm24316 ENSMUSG00000096731 75 0.869 - - 0.869 - - - predicted gene, 24316 [Source:MGI Symbol;Acc:MGI:5454093]
92. Gm5555 ENSMUSG00000083477 39 0.869 - - 0.869 - - - predicted pseudogene 5555 [Source:MGI Symbol;Acc:MGI:3648970]
93. Tmc2 ENSMUSG00000060332 36 0.869 - - 0.869 - - - transmembrane channel-like gene family 2 [Source:MGI Symbol;Acc:MGI:2151017]
94. Abca7 ENSMUSG00000035722 72 0.867 - - - - - 0.867 ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]
95. Hist1h3b ENSMUSG00000069267 24 0.865 - - 0.865 - - - histone cluster 1, H3b [Source:MGI Symbol;Acc:MGI:2448319]
96. Avpr1a ENSMUSG00000020123 14 0.861 - - - - - 0.861 arginine vasopressin receptor 1A [Source:MGI Symbol;Acc:MGI:1859216]
97. Rpsa-ps9 ENSMUSG00000082895 35 0.859 - - 0.859 - - - ribosomal protein SA, pseudogene 9 [Source:MGI Symbol;Acc:MGI:3650393]
98. Casz1 ENSMUSG00000028977 921 0.858 0.858 - - - - - castor zinc finger 1 [Source:MGI Symbol;Acc:MGI:1196251]
99. Vps37c ENSMUSG00000048832 399 0.858 - - 0.858 - - - vacuolar protein sorting 37C [Source:MGI Symbol;Acc:MGI:2147661]
100. Unc93b1 ENSMUSG00000036908 77 0.856 - - 0.856 - - - unc-93 homolog B1, TLR signaling regulator [Source:MGI Symbol;Acc:MGI:1859307]

There are 241 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA