Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Lig4

Gene Name Gene ID Reads Annotation
Lig4 ENSMUSG00000049717 564 ligase IV, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:1335098]







Genes with expression patterns similar to Lig4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lig4 ENSMUSG00000049717 564 5 1.000 1.000 1.000 1.000 - 1.000 ligase IV, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:1335098]
2. 4933415A04Rik ENSMUSG00000045877 412 1.727 0.792 0.935 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
3. Slc50a1 ENSMUSG00000027953 774 1.714 0.815 0.899 - - - - solute carrier family 50 (sugar transporter), member 1 [Source:MGI Symbol;Acc:MGI:107417]
4. Trmt2a ENSMUSG00000022721, ENSMUSG00000098930 1641 1.646 0.818 0.828 - - - - TRM2 tRNA methyltransferase 2A [Source:MGI Symbol;Acc:MGI:96270]
5. Rnf34 ENSMUSG00000029474 1973 1.599 0.714 0.885 - - - - ring finger protein 34 [Source:MGI Symbol;Acc:MGI:2153340]
6. Dclk2 ENSMUSG00000028078 2221 1.55 0.837 0.713 - - - - doublecortin-like kinase 2 [Source:MGI Symbol;Acc:MGI:1918012]
7. Rnaseh2c ENSMUSG00000024925 2015 1.483 0.701 0.782 - - - - ribonuclease H2, subunit C [Source:MGI Symbol;Acc:MGI:1915459]
8. Rab3gap1 ENSMUSG00000036104 515 0.969 - 0.969 - - - - RAB3 GTPase activating protein subunit 1 [Source:MGI Symbol;Acc:MGI:2445001]
9. Map10 ENSMUSG00000050930 246 0.968 - 0.968 - - - - microtubule-associated protein 10 [Source:MGI Symbol;Acc:MGI:1921643]
10. Tceal3 ENSMUSG00000044550 742 0.963 - 0.963 - - - - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
11. Erlin1 ENSMUSG00000025198 667 0.958 - 0.958 - - - - ER lipid raft associated 1 [Source:MGI Symbol;Acc:MGI:2387613]
12. Oprm1 ENSMUSG00000000766 292 0.958 - 0.958 - - - - opioid receptor, mu 1 [Source:MGI Symbol;Acc:MGI:97441]
13. Rrnad1 ENSMUSG00000004896 798 0.957 - 0.957 - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387197]
14. Phospho2 ENSMUSG00000027088 921 0.952 - 0.952 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
15. Heatr5a ENSMUSG00000035181 1099 0.946 - 0.946 - - - - HEAT repeat containing 5A [Source:MGI Symbol;Acc:MGI:2444133]
16. Chfr ENSMUSG00000014668 1287 0.944 - 0.944 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
17. Fndc3a ENSMUSG00000033487 1185 0.944 - 0.944 - - - - fibronectin type III domain containing 3A [Source:MGI Symbol;Acc:MGI:1196463]
18. Ccar2 ENSMUSG00000033712 2357 0.943 - 0.943 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
19. Slc16a9 ENSMUSG00000037762 83 0.942 - 0.942 - - - - solute carrier family 16 (monocarboxylic acid transporters), member 9 [Source:MGI Symbol;Acc:MGI:1914109]
20. Scara5 ENSMUSG00000022032 68 0.942 - 0.942 - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
21. Fbn1 ENSMUSG00000027204 960 0.942 - 0.942 - - - - fibrillin 1 [Source:MGI Symbol;Acc:MGI:95489]
22. 0610005C13Rik ENSMUSG00000109644 478 0.941 - 0.941 - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
23. Gm16409 ENSMUSG00000075581 176 0.941 - 0.941 - - - - predicted gene 16409 [Source:MGI Symbol;Acc:MGI:3646708]
24. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.941 - 0.941 - - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
25. Fam132b 102 0.941 - 0.941 - - - - family with sequence similarity 132, member B, transcript variant X3
26. Gm13652 ENSMUSG00000087333 91 0.941 - 0.941 - - - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
27. Rspo2 ENSMUSG00000051920 204 0.94 - 0.940 - - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
28. Fam120aos ENSMUSG00000097059 81 0.94 - 0.940 - - - - family with sequence similarity 120A, opposite strand [Source:MGI Symbol;Acc:MGI:1915378]
29. Gm4335 ENSMUSG00000097989 113 0.94 - 0.940 - - - - predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
30. Gm10307 ENSMUSG00000101093 159 0.94 - 0.940 - - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
31. Gm16300 ENSMUSG00000089828 225 0.938 - 0.938 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
32. Pdgfb ENSMUSG00000000489 325 0.938 - 0.938 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
33. Gm8349 ENSMUSG00000098208 124 0.938 - 0.938 - - - - predicted gene 8349 [Source:MGI Symbol;Acc:MGI:3643135]
34. Gnpda2 ENSMUSG00000029209 182 0.938 - 0.938 - - - - glucosamine-6-phosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:1915230]
35. Zfp947 ENSMUSG00000063383 396 0.937 - 0.937 - - - - zinc finger protein 947 [Source:MGI Symbol;Acc:MGI:3646759]
36. Arhgap23 ENSMUSG00000049807 1316 0.937 - 0.937 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
37. Usf1 ENSMUSG00000026641 336 0.937 - 0.937 - - - - upstream transcription factor 1 [Source:MGI Symbol;Acc:MGI:99542]
38. Lamtor2 ENSMUSG00000028062 570 0.935 - 0.935 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
39. Rfx5 ENSMUSG00000005774 204 0.935 - 0.935 - - - - regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
40. Tmem39a ENSMUSG00000002845 1066 0.934 - 0.934 - - - - transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]
41. Pank1 ENSMUSG00000033610 1083 0.934 - 0.934 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
42. Dpy19l4 ENSMUSG00000045205 962 0.934 - 0.934 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
43. Tmem243 ENSMUSG00000079659 181 0.934 - 0.934 - - - - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
44. C2cd2l ENSMUSG00000032120 223 0.934 - 0.934 - - - - C2 calcium-dependent domain containing 2-like [Source:MGI Symbol;Acc:MGI:1919014]
45. Tgfbrap1 ENSMUSG00000070939 1413 0.934 - 0.934 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
46. Zfp407 ENSMUSG00000048410 2356 0.933 - 0.933 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
47. Gm16702 ENSMUSG00000097796 133 0.932 - 0.932 - - - - predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
48. Pigu ENSMUSG00000038383 705 0.931 - 0.931 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
49. Cyr61 ENSMUSG00000028195 563 0.931 - 0.931 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
50. Gm11944 ENSMUSG00000084941 286 0.931 - 0.931 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
51. Prcc ENSMUSG00000004895 527 0.931 - 0.931 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
52. Vps9d1 ENSMUSG00000001062 694 0.928 - 0.928 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
53. Tapt1 ENSMUSG00000046985 1206 0.928 - 0.928 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
54. Ube2g2 ENSMUSG00000009293 1035 0.928 - 0.928 - - - - ubiquitin-conjugating enzyme E2G 2 [Source:MGI Symbol;Acc:MGI:1343188]
55. Med13l ENSMUSG00000018076 1863 0.928 - 0.928 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
56. Tssc1 949 0.927 - 0.927 - - - - tumor suppressing subtransferable candidate 1, transcript variant X3
57. Map3k1 ENSMUSG00000021754 2844 0.926 - 0.926 - - - - mitogen-activated protein kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346872]
58. Dffa ENSMUSG00000028974 1127 0.926 - 0.926 - - - - DNA fragmentation factor, alpha subunit [Source:MGI Symbol;Acc:MGI:1196227]
59. Snapc3 ENSMUSG00000028483 2319 0.925 - 0.925 - - - - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
60. Mzt2 ENSMUSG00000022671 866 0.925 - 0.925 - - - - mitotic spindle organizing protein 2 [Source:MGI Symbol;Acc:MGI:1922845]
61. Dip2a ENSMUSG00000020231 649 0.924 - 0.924 - - - - disco interacting protein 2 homolog A [Source:MGI Symbol;Acc:MGI:2385920]
62. Gm26822 ENSMUSG00000096921 421 0.924 - 0.924 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
63. Rrp15 ENSMUSG00000001305 966 0.924 - 0.924 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
64. Gm10689 ENSMUSG00000074412 328 0.923 - 0.923 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]
65. Mcam ENSMUSG00000032135 610 0.922 - 0.922 - - - - melanoma cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1933966]
66. Taf1b ENSMUSG00000059669 413 0.922 - 0.922 - - - - TATA-box binding protein associated factor, RNA polymerase I, B [Source:MGI Symbol;Acc:MGI:109577]
67. Fam102b ENSMUSG00000040339 1195 0.922 - 0.922 - - - - family with sequence similarity 102, member B [Source:MGI Symbol;Acc:MGI:3036259]
68. Ubox5 ENSMUSG00000027300 434 0.921 - 0.921 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
69. Rps19bp1 ENSMUSG00000051518 828 0.92 - 0.920 - - - - ribosomal protein S19 binding protein 1 [Source:MGI Symbol;Acc:MGI:1913788]
70. Wnk3 ENSMUSG00000041245 552 0.92 - 0.920 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
71. Auh ENSMUSG00000021460 1425 0.92 - 0.920 - - - - AU RNA binding protein/enoyl-coenzyme A hydratase [Source:MGI Symbol;Acc:MGI:1338011]
72. Usp2 ENSMUSG00000032010 525 0.919 - 0.919 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
73. Zfp609 ENSMUSG00000040524 1316 0.919 - 0.919 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
74. Ednra ENSMUSG00000031616 1286 0.917 - 0.917 - - - - endothelin receptor type A [Source:MGI Symbol;Acc:MGI:105923]
75. Phkb ENSMUSG00000036879 701 0.917 - 0.917 - - - - phosphorylase kinase beta [Source:MGI Symbol;Acc:MGI:97578]
76. AW209491 ENSMUSG00000039182 618 0.917 - 0.917 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
77. Evi5l ENSMUSG00000011832 691 0.917 - 0.917 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
78. Pgap1 ENSMUSG00000073678 833 0.916 - 0.916 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
79. Crcp ENSMUSG00000025532 699 0.916 - 0.916 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
80. Dzank1 ENSMUSG00000037259 518 0.914 - 0.914 - - - - double zinc ribbon and ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:2139080]
81. Sec11c ENSMUSG00000024516 640 0.914 - 0.914 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
82. Smoc2 ENSMUSG00000023886 712 0.914 - 0.914 - - - - SPARC related modular calcium binding 2 [Source:MGI Symbol;Acc:MGI:1929881]
83. Gm15879 ENSMUSG00000084790 387 0.913 - 0.913 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
84. Cryzl1 ENSMUSG00000058240 2195 0.913 - 0.913 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
85. Mtx3 ENSMUSG00000021704 616 0.913 - 0.913 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
86. Fam3c ENSMUSG00000029672 1429 0.912 - 0.912 - - - - family with sequence similarity 3, member C [Source:MGI Symbol;Acc:MGI:107892]
87. Zfp30 ENSMUSG00000047473 562 0.912 - 0.912 - - - - zinc finger protein 30 [Source:MGI Symbol;Acc:MGI:99178]
88. Klf11 ENSMUSG00000020653 838 0.911 - 0.911 - - - - Kruppel-like factor 11 [Source:MGI Symbol;Acc:MGI:2653368]
89. 0610010F05Rik ENSMUSG00000042208 755 0.911 - 0.911 - - - - RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
90. 4632434I11Rik 4632434I11Rik 951 0.91 - 0.910 - - - -
91. Pdlim5 ENSMUSG00000028273 1512 0.91 - 0.910 - - - - PDZ and LIM domain 5 [Source:MGI Symbol;Acc:MGI:1927489]
92. Dido1 ENSMUSG00000038914 1891 0.91 - 0.910 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
93. Ubr1 ENSMUSG00000027272 1633 0.908 - 0.908 - - - - ubiquitin protein ligase E3 component n-recognin 1 [Source:MGI Symbol;Acc:MGI:1277977]
94. Mex3d ENSMUSG00000048696 2206 0.908 - 0.908 - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
95. Acsl3 ENSMUSG00000032883 1975 0.907 - 0.907 - - - - acyl-CoA synthetase long-chain family member 3 [Source:MGI Symbol;Acc:MGI:1921455]
96. Nsun4 ENSMUSG00000028706 804 0.907 - 0.907 - - - - NOL1/NOP2/Sun domain family, member 4 [Source:MGI Symbol;Acc:MGI:1919431]
97. Atp8a1 ENSMUSG00000037685 1155 0.907 - 0.907 - - - - ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
98. Cirbp ENSMUSG00000045193 1324 0.907 - 0.907 - - - - cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588]
99. Zswim1 ENSMUSG00000017764 460 0.906 - 0.906 - - - - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
100. Eri3 ENSMUSG00000033423 3943 0.906 - 0.906 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]

There are 583 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA