Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lig1

Gene Name Gene ID Reads Annotation
Lig1 ENSMUSG00000056394 9492 ligase I, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:101789]







Genes with expression patterns similar to Lig1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lig1 ENSMUSG00000056394 9492 6 1.000 1.000 1.000 1.000 1.000 1.000 ligase I, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:101789]
2. Cyb5 Cyb5 6990 1.479 0.724 0.755 - - - -
3. Prmt5 ENSMUSG00000023110 3788 0.822 - 0.822 - - - - protein arginine N-methyltransferase 5 [Source:MGI Symbol;Acc:MGI:1351645]
4. Gnpat ENSMUSG00000031985 3628 0.822 - 0.822 - - - - glyceronephosphate O-acyltransferase [Source:MGI Symbol;Acc:MGI:1343460]
5. Git1 ENSMUSG00000011877 5458 0.822 - 0.822 - - - - G protein-coupled receptor kinase-interactor 1 [Source:MGI Symbol;Acc:MGI:1927140]
6. Seh1l ENSMUSG00000079614 7707 0.816 - 0.816 - - - - SEH1-like (S. cerevisiae [Source:MGI Symbol;Acc:MGI:1919374]
7. Rif1 ENSMUSG00000036202 4921 0.811 - 0.811 - - - - replication timing regulatory factor 1 [Source:MGI Symbol;Acc:MGI:1098622]
8. Zfhx4 ENSMUSG00000025255 6456 0.808 - 0.808 - - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
9. Stag2 ENSMUSG00000025862 3862 0.807 - 0.807 - - - - stromal antigen 2 [Source:MGI Symbol;Acc:MGI:1098583]
10. Tlk2 ENSMUSG00000020694 2900 0.804 - 0.804 - - - - tousled-like kinase 2 (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1346023]
11. Clp1 ENSMUSG00000027079 3327 0.803 - 0.803 - - - - CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
12. Med11 ENSMUSG00000018923 1869 0.801 - 0.801 - - - - mediator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1913422]
13. Gsk3a ENSMUSG00000057177 6300 0.799 - 0.799 - - - - glycogen synthase kinase 3 alpha [Source:MGI Symbol;Acc:MGI:2152453]
14. Ssrp1 ENSMUSG00000027067 6139 0.799 - 0.799 - - - - structure specific recognition protein 1 [Source:MGI Symbol;Acc:MGI:107912]
15. Gtf2h5 ENSMUSG00000034345 6035 0.799 - 0.799 - - - - general transcription factor IIH, polypeptide 5 [Source:MGI Symbol;Acc:MGI:107227]
16. Mcat ENSMUSG00000048755 1758 0.798 - 0.798 - - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:MGI Symbol;Acc:MGI:2388651]
17. Tnpo1 ENSMUSG00000009470 10504 0.798 0.798 - - - - - transportin 1 [Source:MGI Symbol;Acc:MGI:2681523]
18. Ppp1cc ENSMUSG00000004455 7445 0.797 - 0.797 - - - - protein phosphatase 1 catalytic subunit gamma [Source:MGI Symbol;Acc:MGI:104872]
19. Mrpl2 ENSMUSG00000002767 1834 0.797 - 0.797 - - - - mitochondrial ribosomal protein L2 [Source:MGI Symbol;Acc:MGI:1351622]
20. L3mbtl3 ENSMUSG00000039089 2946 0.794 - 0.794 - - - - L3MBTL3 histone methyl-lysine binding protein [Source:MGI Symbol;Acc:MGI:2143628]
21. Tmem30a ENSMUSG00000032328 4977 0.794 - 0.794 - - - - transmembrane protein 30A [Source:MGI Symbol;Acc:MGI:106402]
22. Puf60 ENSMUSG00000002524 11932 0.794 - 0.794 - - - - poly-U binding splicing factor 60 [Source:MGI Symbol;Acc:MGI:1915209]
23. Tgfbi ENSMUSG00000035493 4482 0.792 - 0.792 - - - - transforming growth factor, beta induced [Source:MGI Symbol;Acc:MGI:99959]
24. Trim37 ENSMUSG00000018548 2097 0.792 - 0.792 - - - - tripartite motif-containing 37 [Source:MGI Symbol;Acc:MGI:2153072]
25. Tead1 ENSMUSG00000055320 9676 0.791 - 0.791 - - - - TEA domain family member 1 [Source:MGI Symbol;Acc:MGI:101876]
26. Vasp ENSMUSG00000030403 3283 0.791 - 0.791 - - - - vasodilator-stimulated phosphoprotein [Source:MGI Symbol;Acc:MGI:109268]
27. 2610524H06Rik ENSMUSG00000092486 3935 0.789 - 0.789 - - - - RIKEN cDNA 2610524H06 gene [Source:MGI Symbol;Acc:MGI:2447819]
28. Nagk ENSMUSG00000034744 2122 0.786 - 0.786 - - - - N-acetylglucosamine kinase [Source:MGI Symbol;Acc:MGI:1860418]
29. Zfp771 ENSMUSG00000054716 5576 0.786 - 0.786 - - - - zinc finger protein 771 [Source:MGI Symbol;Acc:MGI:2442050]
30. Qars ENSMUSG00000032604 3794 0.784 - 0.784 - - - - glutaminyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1915851]
31. 2010003O02Rik 2010003O02Rik 2896 0.784 - 0.784 - - - -
32. Hdac7 ENSMUSG00000022475 2505 0.784 - 0.784 - - - - histone deacetylase 7 [Source:MGI Symbol;Acc:MGI:1891835]
33. Tspan14 ENSMUSG00000037824 1679 0.783 - 0.783 - - - - tetraspanin 14 [Source:MGI Symbol;Acc:MGI:1196325]
34. Bbip1 ENSMUSG00000084957 1639 0.781 - 0.781 - - - - BBSome interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913610]
35. Gle1 ENSMUSG00000019715 2053 0.78 - 0.780 - - - - GLE1 RNA export mediator (yeast) [Source:MGI Symbol;Acc:MGI:1921662]
36. Raly ENSMUSG00000027593 727 0.78 - 0.780 - - - - hnRNP-associated with lethal yellow [Source:MGI Symbol;Acc:MGI:97850]
37. Gpn1 ENSMUSG00000064037 2632 0.779 - 0.779 - - - - GPN-loop GTPase 1 [Source:MGI Symbol;Acc:MGI:1921504]
38. Nomo1 ENSMUSG00000030835 5074 0.779 - 0.779 - - - - nodal modulator 1 [Source:MGI Symbol;Acc:MGI:2385850]
39. Rab40c ENSMUSG00000025730 829 0.779 - 0.779 - - - - Rab40C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2183454]
40. Jkamp ENSMUSG00000005078 6596 0.778 - 0.778 - - - - JNK1/MAPK8-associated membrane protein [Source:MGI Symbol;Acc:MGI:1915057]
41. Clasp1 ENSMUSG00000064302 3819 0.777 - 0.777 - - - - CLIP associating protein 1 [Source:MGI Symbol;Acc:MGI:1923957]
42. Cul5 ENSMUSG00000032030 1885 0.776 - 0.776 - - - - cullin 5 [Source:MGI Symbol;Acc:MGI:1922967]
43. Ppm1g ENSMUSG00000029147 5699 0.776 - 0.776 - - - - protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform [Source:MGI Symbol;Acc:MGI:106065]
44. Cad ENSMUSG00000013629 2151 0.776 - 0.776 - - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:MGI Symbol;Acc:MGI:1916969]
45. Ndrg3 ENSMUSG00000027634 1152 0.776 - 0.776 - - - - N-myc downstream regulated gene 3 [Source:MGI Symbol;Acc:MGI:1352499]
46. Phb ENSMUSG00000038845 3385 0.776 - 0.776 - - - - prohibitin [Source:MGI Symbol;Acc:MGI:97572]
47. Zfp652 ENSMUSG00000075595 1805 0.775 - 0.775 - - - - zinc finger protein 652 [Source:MGI Symbol;Acc:MGI:2442221]
48. Arhgef2 ENSMUSG00000028059 3179 0.775 - 0.775 - - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
49. Ccnyl1 ENSMUSG00000070871 1395 0.775 - 0.775 - - - - cyclin Y-like 1 [Source:MGI Symbol;Acc:MGI:2138614]
50. Sc4mol Sc4mol 7168 0.774 - 0.774 - - - -
51. Mapk3 ENSMUSG00000063065 1979 0.773 - 0.773 - - - - mitogen-activated protein kinase 3 [Source:MGI Symbol;Acc:MGI:1346859]
52. Paip1 ENSMUSG00000025451 3731 0.772 - 0.772 - - - - polyadenylate binding protein-interacting protein 1 [Source:MGI Symbol;Acc:MGI:2384993]
53. Frs2 ENSMUSG00000020170 1424 0.772 - 0.772 - - - - fibroblast growth factor receptor substrate 2 [Source:MGI Symbol;Acc:MGI:1100860]
54. Ncbp2 ENSMUSG00000022774 6454 0.771 - 0.771 - - - - nuclear cap binding protein subunit 2 [Source:MGI Symbol;Acc:MGI:1915342]
55. Nup50 ENSMUSG00000016619 5771 0.77 - 0.770 - - - - nucleoporin 50 [Source:MGI Symbol;Acc:MGI:1351502]
56. Abhd2 ENSMUSG00000039202 1823 0.77 - 0.770 - - - - abhydrolase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914344]
57. RP23-103I12.13 RP23-103I12.13 1512 0.77 - 0.770 - - - -
58. Adamts9 ENSMUSG00000030022 3704 0.77 - 0.770 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 [Source:MGI Symbol;Acc:MGI:1916320]
59. Orc4 ENSMUSG00000026761 1899 0.769 - 0.769 - - - - origin recognition complex, subunit 4 [Source:MGI Symbol;Acc:MGI:1347043]
60. Gm12751 ENSMUSG00000062554 1377 0.769 - 0.769 - - - - predicted gene 12751 [Source:MGI Symbol;Acc:MGI:3651049]
61. Ube2t ENSMUSG00000026429 808 0.769 - 0.769 - - - - ubiquitin-conjugating enzyme E2T [Source:MGI Symbol;Acc:MGI:1914446]
62. Zfp35 ENSMUSG00000063281 1438 0.769 - 0.769 - - - - zinc finger protein 35 [Source:MGI Symbol;Acc:MGI:99179]
63. Ufc1 ENSMUSG00000062963 2274 0.769 - 0.769 - - - - ubiquitin-fold modifier conjugating enzyme 1 [Source:MGI Symbol;Acc:MGI:1913405]
64. Hs6st1 ENSMUSG00000045216 2389 0.769 - 0.769 - - - - heparan sulfate 6-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1354958]
65. Rnf8 ENSMUSG00000090083 2854 0.768 - 0.768 - - - - ring finger protein 8 [Source:MGI Symbol;Acc:MGI:1929069]
66. Dck ENSMUSG00000029366 2642 0.768 - 0.768 - - - - deoxycytidine kinase [Source:MGI Symbol;Acc:MGI:102726]
67. Actn4 ENSMUSG00000054808 4424 0.767 - 0.767 - - - - actinin alpha 4 [Source:MGI Symbol;Acc:MGI:1890773]
68. Tnpo2 ENSMUSG00000031691 3393 0.767 - 0.767 - - - - transportin 2 (importin 3, karyopherin beta 2b) [Source:MGI Symbol;Acc:MGI:2384849]
69. Tshz1 ENSMUSG00000046982 6343 0.766 - 0.766 - - - - teashirt zinc finger family member 1 [Source:MGI Symbol;Acc:MGI:1346031]
70. Uhmk1 ENSMUSG00000026667 3184 0.766 - 0.766 - - - - U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
71. Gm3550 ENSMUSG00000078240 469 0.766 - 0.766 - - - - predicted gene 3550 [Source:MGI Symbol;Acc:MGI:3781727]
72. Zcchc18 ENSMUSG00000031428 2572 0.766 - 0.766 - - - - zinc finger, CCHC domain containing 18 [Source:MGI Symbol;Acc:MGI:1914245]
73. Ryk ENSMUSG00000032547 2629 0.766 - 0.766 - - - - receptor-like tyrosine kinase [Source:MGI Symbol;Acc:MGI:101766]
74. Etl4 ENSMUSG00000036617 2482 0.765 - 0.765 - - - - enhancer trap locus 4 [Source:MGI Symbol;Acc:MGI:95454]
75. Gins1 ENSMUSG00000027454 1119 0.765 - 0.765 - - - - GINS complex subunit 1 (Psf1 homolog) [Source:MGI Symbol;Acc:MGI:1916520]
76. Sumo2 ENSMUSG00000020738 1345 0.765 - 0.765 - - - - small ubiquitin-like modifier 2 [Source:MGI Symbol;Acc:MGI:2158813]
77. Dnph1 ENSMUSG00000040658 1380 0.764 - 0.764 - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:MGI Symbol;Acc:MGI:3039376]
78. Fam102a ENSMUSG00000039157 428 0.764 - 0.764 - - - - family with sequence similarity 102, member A [Source:MGI Symbol;Acc:MGI:2138935]
79. Gpr89 ENSMUSG00000028096 598 0.763 - 0.763 - - - - G protein-coupled receptor 89 [Source:MGI Symbol;Acc:MGI:1914799]
80. Vamp3 ENSMUSG00000028955 5771 0.762 - 0.762 - - - - vesicle-associated membrane protein 3 [Source:MGI Symbol;Acc:MGI:1321389]
81. Snx18 ENSMUSG00000042364 4053 0.762 - 0.762 - - - - sorting nexin 18 [Source:MGI Symbol;Acc:MGI:2137642]
82. 0610009O20Rik 485 0.762 - 0.762 - - - - RIKEN cDNA 0610009O20 gene
83. Lfng ENSMUSG00000029570 386 0.762 - 0.762 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095413]
84. Acbd5 ENSMUSG00000026781 774 0.761 - 0.761 - - - - acyl-Coenzyme A binding domain containing 5 [Source:MGI Symbol;Acc:MGI:1921409]
85. Eef1d ENSMUSG00000055762 11884 0.761 - 0.761 - - - - eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906]
86. Zcchc7 ENSMUSG00000035649 1297 0.76 - 0.760 - - - - zinc finger, CCHC domain containing 7 [Source:MGI Symbol;Acc:MGI:2442912]
87. Larp4b ENSMUSG00000033499 1274 0.76 - 0.760 - - - - La ribonucleoprotein domain family, member 4B [Source:MGI Symbol;Acc:MGI:106330]
88. Acn9 Acn9 933 0.76 - 0.760 - - - -
89. Slc38a4 ENSMUSG00000022464 2482 0.76 - 0.760 - - - - solute carrier family 38, member 4 [Source:MGI Symbol;Acc:MGI:1916604]
90. Snip1 ENSMUSG00000050213 980 0.759 - 0.759 - - - - Smad nuclear interacting protein 1 [Source:MGI Symbol;Acc:MGI:2156003]
91. Zfp961 ENSMUSG00000052446 869 0.759 - 0.759 - - - - zinc finger protein 961 [Source:MGI Symbol;Acc:MGI:3583954]
92. Afg3l2 ENSMUSG00000024527 3339 0.759 - 0.759 - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
93. Idnk ENSMUSG00000050002 1717 0.759 - 0.759 - - - - idnK gluconokinase homolog (E. coli) [Source:MGI Symbol;Acc:MGI:1922981]
94. Tbc1d22b ENSMUSG00000042203 649 0.759 - 0.759 - - - - TBC1 domain family, member 22B [Source:MGI Symbol;Acc:MGI:2681867]
95. Utp20 ENSMUSG00000004356 1170 0.759 - 0.759 - - - - UTP20 small subunit processome component [Source:MGI Symbol;Acc:MGI:1917933]
96. Upp1 ENSMUSG00000020407 279 0.759 - 0.759 - - - - uridine phosphorylase 1 [Source:MGI Symbol;Acc:MGI:1097668]
97. 2700050L05Rik 2700050L05Rik 694 0.758 - 0.758 - - - -
98. Phyhipl ENSMUSG00000037747 636 0.758 - 0.758 - - - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
99. 4930452B06Rik ENSMUSG00000021747 971 0.758 - 0.758 - - - - RIKEN cDNA 4930452B06 gene [Source:MGI Symbol;Acc:MGI:1926154]
100. Zfp706 ENSMUSG00000062397 10503 0.758 - 0.758 - - - - zinc finger protein 706 [Source:MGI Symbol;Acc:MGI:1915286]

There are 95 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA